Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O14
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical pr...   186   2e-47
Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical p...    68   5e-12
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   4.9  
AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin...    28   6.5  
Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z82274-1|CAB05226.1|  165|Caenorhabditis elegans Hypothetical
           protein JC8.3a protein.
          Length = 165

 Score =  186 bits (452), Expect = 2e-47
 Identities = 82/107 (76%), Positives = 99/107 (92%)
 Frame = +3

Query: 123 MPPKFDPNEIKIVNLRCVGGEVGATSSLAPKIGPLGLSPKKVGDDIAKATSDWKGLKITV 302
           MPPKFDP EIKIV LRCVGGEVGATS+LAPK+GPLGLSPKK+G+DIAKAT DWKGLK+T 
Sbjct: 1   MPPKFDPTEIKIVYLRCVGGEVGATSALAPKVGPLGLSPKKIGEDIAKATQDWKGLKVTC 60

Query: 303 QLTVQNRQAQIAVVPSAAALIIRALKEPPRDRKKQKNIKHNGNISLE 443
           +LT+QNR A+I VVPSAA+LI++ LKEPPRDRKK KN+KHNG+++++
Sbjct: 61  KLTIQNRVAKIDVVPSAASLIVKELKEPPRDRKKVKNVKHNGDLTVD 107



 Score = 72.9 bits (171), Expect = 2e-13
 Identities = 36/70 (51%), Positives = 48/70 (68%), Gaps = 2/70 (2%)
 Frame = +1

Query: 406 RKISNTTATSPLK--DVXGIAXIMRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLI 579
           +K+ N      L    +  IA IMR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I
Sbjct: 93  KKVKNVKHNGDLTVDTIIKIARIMRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDII 152

Query: 580 DDINSGALTI 609
           + I +G + I
Sbjct: 153 ESIANGEIEI 162


>Z82274-14|CAJ76933.1|   50|Caenorhabditis elegans Hypothetical
           protein JC8.3c protein.
          Length = 50

 Score = 68.1 bits (159), Expect = 5e-12
 Identities = 30/47 (63%), Positives = 39/47 (82%)
 Frame = +1

Query: 469 MRNRSMARYLSGSVKEILGTAQSVGCTVEGRPPHDLIDDINSGALTI 609
           MR RSMA+ L G+VKEILGTAQSVGCT++G+ PHD+I+ I +G + I
Sbjct: 1   MRPRSMAKKLEGTVKEILGTAQSVGCTIDGQHPHDIIESIANGEIEI 47


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -3

Query: 545 HPTDCAVPRISFTEPERYRAIDL 477
           HPT CAV    F +P +Y  IDL
Sbjct: 291 HPTACAVSLFLFYDPYQYYLIDL 313


>AC024785-5|AAF60596.1|  577|Caenorhabditis elegans C-type lectin
           protein 73 protein.
          Length = 577

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 296 DLETLPVTCGLGNVITHLFRRQTKRTDFR 210
           D ++LP+ C LG V+ + ++     TDFR
Sbjct: 386 DSQSLPIWCKLGKVVKYKYKVTPGWTDFR 414


>Z68301-4|CAA92623.2|  536|Caenorhabditis elegans Hypothetical
           protein W01B6.5 protein.
          Length = 536

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
 Frame = +3

Query: 321 RQAQIAVVPSAAALIIRALKEPPRD-----RKKQKNIKHNGNISLERCXRHCEXHEKQIN 485
           R+  ++V+ +    +IR   +P +      +K Q ++K  GN+S E+C +  +  E+++ 
Sbjct: 116 REDLMSVLKNVGDFLIRTSVQPNKHEVEKMKKNQADVKVLGNLSREKCAKKEKEKEEKLA 175

Query: 486 G 488
           G
Sbjct: 176 G 176


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,993,556
Number of Sequences: 27780
Number of extensions: 312063
Number of successful extensions: 779
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 779
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)