Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O11
         (487 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8N110 Cluster: Multiple myeloma overexpression gene 2;...    72   6e-12
UniRef50_Q8WXC6 Cluster: Myeloma overexpressed gene 2 protein; n...    61   1e-08
UniRef50_Q7JVR7 Cluster: GH04581p; n=2; Sophophora|Rep: GH04581p...    54   2e-06
UniRef50_UPI00006CC37B Cluster: hypothetical protein TTHERM_0058...    34   1.5  
UniRef50_Q31JK7 Cluster: Major facilitator superfamily (MFS) tra...    33   4.5  

>UniRef50_Q8N110 Cluster: Multiple myeloma overexpression gene 2;
           n=11; Euteleostomi|Rep: Multiple myeloma overexpression
           gene 2 - Homo sapiens (Human)
          Length = 57

 Score = 72.1 bits (169), Expect = 6e-12
 Identities = 34/43 (79%), Positives = 37/43 (86%)
 Frame = +2

Query: 173 MKPTIAADEMFPEGVGPYMDLEEAGGPSNLLMDLAANEKAVHA 301
           MKP  A DEMFPEG GPY+DL+EAGG + LLMDLAANEKAVHA
Sbjct: 1   MKP--AVDEMFPEGAGPYVDLDEAGGSTGLLMDLAANEKAVHA 41


>UniRef50_Q8WXC6 Cluster: Myeloma overexpressed gene 2 protein;
           n=11; Coelomata|Rep: Myeloma overexpressed gene 2
           protein - Homo sapiens (Human)
          Length = 252

 Score = 60.9 bits (141), Expect = 1e-08
 Identities = 34/54 (62%), Positives = 38/54 (70%), Gaps = 10/54 (18%)
 Frame = +2

Query: 170 KMKPTIAADEMFPEGVGPYMDLEE----------AGGPSNLLMDLAANEKAVHA 301
           +MKP  A DEMFPEG GPY+DL+E          AGG + LLMDLAANEKAVHA
Sbjct: 21  EMKP--AVDEMFPEGAGPYVDLDEVARARRESPSAGGSTGLLMDLAANEKAVHA 72


>UniRef50_Q7JVR7 Cluster: GH04581p; n=2; Sophophora|Rep: GH04581p -
           Drosophila melanogaster (Fruit fly)
          Length = 71

 Score = 54.0 bits (124), Expect = 2e-06
 Identities = 25/44 (56%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 173 MKPTIAADEMFPEGVGPYMDLEEAGGPSNLLMD-LAANEKAVHA 301
           MKP++AADEMF EG G YM+++E+GG + ++MD L +N+K VHA
Sbjct: 5   MKPSLAADEMFSEGPG-YMEMDESGGATGMMMDHLPSNDKHVHA 47


>UniRef50_UPI00006CC37B Cluster: hypothetical protein TTHERM_00588880;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00588880 - Tetrahymena thermophila SB210
          Length = 1492

 Score = 34.3 bits (75), Expect = 1.5
 Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
 Frame = +2

Query: 65   SDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV*TYKMKPTIAADEMFP--EGVGPYMDLE 238
            ++ L YCEYY+  K K+I+T+Q +K+ Y       K+K     + M P  E +      +
Sbjct: 924  NEQLDYCEYYKDFK-KNISTKQNIKWRYP------KVKRNFQQEFMLPDIEDINHLFQEK 976

Query: 239  EAGGPSNLLMDLAANEKAVHA 301
            E G P     + A + K V++
Sbjct: 977  ELGCPYFYSKEAAKSAKIVYS 997


>UniRef50_Q31JK7 Cluster: Major facilitator superfamily (MFS)
           transporter protein; n=1; Thiomicrospira crunogena
           XCL-2|Rep: Major facilitator superfamily (MFS)
           transporter protein - Thiomicrospira crunogena (strain
           XCL-2)
          Length = 429

 Score = 32.7 bits (71), Expect = 4.5
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -1

Query: 196 VCSNSWFHFIGSNVIR---VVVFNFLSGVNVLVFDCPVVFTINKIITILCATSHK*ILRS 26
           V S SWF F+G+  +    V+V ++LSG + +V     VF+I   +    A+  K  +R+
Sbjct: 229 VLSISWFWFLGATYLSQMPVLVSDYLSGNDKVVLLFLAVFSIGIALGAWIASQLKTPVRT 288

Query: 25  LKNIALL 5
           +KN+  L
Sbjct: 289 IKNVQWL 295


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 371,709,710
Number of Sequences: 1657284
Number of extensions: 6083397
Number of successful extensions: 16614
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 16210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16609
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 28130105105
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)