Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O11
         (487 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118736-1|AAM50596.1|   71|Drosophila melanogaster GH04581p pro...    54   1e-07
AE013599-1666|AAF58405.1|   71|Drosophila melanogaster CG17059-P...    54   1e-07

>AY118736-1|AAM50596.1|   71|Drosophila melanogaster GH04581p
           protein.
          Length = 71

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 173 MKPTIAADEMFPEGVGPYMDLEEAGGPSNLLMD-LAANEKAVHA 301
           MKP++AADEMF EG G YM+++E+GG + ++MD L +N+K VHA
Sbjct: 5   MKPSLAADEMFSEGPG-YMEMDESGGATGMMMDHLPSNDKHVHA 47


>AE013599-1666|AAF58405.1|   71|Drosophila melanogaster CG17059-PA
           protein.
          Length = 71

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 25/44 (56%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
 Frame = +2

Query: 173 MKPTIAADEMFPEGVGPYMDLEEAGGPSNLLMD-LAANEKAVHA 301
           MKP++AADEMF EG G YM+++E+GG + ++MD L +N+K VHA
Sbjct: 5   MKPSLAADEMFSEGPG-YMEMDESGGATGMMMDHLPSNDKHVHA 47


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,806,031
Number of Sequences: 53049
Number of extensions: 285219
Number of successful extensions: 848
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 818
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 838
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1705394754
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)