Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O11
(487 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g... 29 1.4
U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g... 29 1.4
U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g ... 29 1.4
U64599-8|AAZ91356.1| 226|Caenorhabditis elegans Regulator of g ... 29 1.4
U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g ... 29 1.4
AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein. 29 1.4
AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protei... 29 1.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 27 5.5
U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical pr... 27 9.5
>U64599-11|ABD94099.1| 324|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform e protein.
Length = 324
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 212 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 245
>U64599-10|AAL11463.1| 424|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform c protein.
Length = 424
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 312 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 345
>U64599-9|AAL65791.1| 782|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform b protein.
Length = 782
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 670 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 703
>U64599-8|AAZ91356.1| 226|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform d protein.
Length = 226
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 114 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 147
>U64599-7|AAL11462.1| 819|Caenorhabditis elegans Regulator of g
protein signalingprotein 7, isoform a protein.
Length = 819
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 707 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 740
>AY569308-1|AAS75452.1| 819|Caenorhabditis elegans RGS-7A protein.
Length = 819
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 707 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 740
>AB080201-1|BAB85494.1| 782|Caenorhabditis elegans C2-RGS protein
protein.
Length = 782
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +2
Query: 59 QNSDYLIYCEYYRAIKDKHINTRQKVKYYYSNYV 160
+N D+ + CE ++ +KD +T QK YS +V
Sbjct: 670 ENMDFWLECEEFKKMKDGKKSTTQKAIEIYSEFV 703
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.5 bits (58), Expect = 5.5
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = +3
Query: 90 TTGQSKTSTLTPDKKLNTTTRITFEP 167
TT K ST T KKL TTT T +P
Sbjct: 377 TTTTKKPSTTTSTKKLTTTTTTTPKP 402
>U53150-2|AAV28350.1| 580|Caenorhabditis elegans Hypothetical
protein F20A1.4 protein.
Length = 580
Score = 27.1 bits (57), Expect = 7.2
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -1
Query: 181 WFHFIGSNVIRVVVFNFLSGVNVLVFDCP-VVFTINKII 68
W+HF SNVI +V+ ++ +VF P + TI +I
Sbjct: 415 WYHFGQSNVILLVIILLITNWITVVFFYPSAIATIGPLI 453
>Z72509-1|CAA96645.1| 339|Caenorhabditis elegans Hypothetical
protein F32G8.1 protein.
Length = 339
Score = 26.6 bits (56), Expect = 9.5
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = -1
Query: 184 SWFHFIGSNVIRVVVFNFLSGVNVLVFDCPVVFTINKIITILCAT 50
S+F FI ++ + +F+ S V ++VF PVVF ++ + +T
Sbjct: 13 SYFQFIFGFILVLPMFSQTSVVLLVVFKTPVVFKDFRVFLVNSST 57
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,987,587
Number of Sequences: 27780
Number of extensions: 157966
Number of successful extensions: 437
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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