Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O09
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical pr...    99   1e-21
Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U10414-5|AAU05572.1|  156|Caenorhabditis elegans Hypothetical
           protein F42A10.9 protein.
          Length = 156

 Score =   99 bits (238), Expect = 1e-21
 Identities = 48/95 (50%), Positives = 63/95 (66%)
 Frame = +2

Query: 362 KVFVYGTLKRNEPNHGTMTNPENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYN 541
           KVFVYGTLK  EPN+  ++  + G   FI+ G T EK+PL++ TKYN+PFLL   G G N
Sbjct: 6   KVFVYGTLKTGEPNYKVLSETD-GEYRFISSGTTVEKFPLVVGTKYNIPFLLDDAGNGNN 64

Query: 542 VKGEIYEVDDKMLSNLDILEDHPNCYIXXKNDIXL 646
           ++GE+YEV +K L  LD LE +P  Y   K +I L
Sbjct: 65  IEGEMYEVCEKKLKVLDELEAYPTLYDRKKVEIKL 99


>Z83319-1|CAB05908.1|  322|Caenorhabditis elegans Hypothetical
           protein T02D1.3 protein.
          Length = 322

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 10/47 (21%)
 Frame = -2

Query: 555 ISPFTLYPVPGLCNRNGTLY-----FVAMINGYF-----SFVIPSAI 445
           I  FTL P  GLC +   LY     +V  IN +F     +F++P+AI
Sbjct: 166 IFTFTLNPALGLCRQYNVLYQFGHIYVFFINNWFNVKLDNFLVPNAI 212


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,046,370
Number of Sequences: 27780
Number of extensions: 289215
Number of successful extensions: 672
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 671
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)