Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O09
         (649 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.36 
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    26   0.36 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   3.4  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    23   3.4  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   3.4  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +2

Query: 422 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 601
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 602 D 604
           D
Sbjct: 364 D 364


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 25.8 bits (54), Expect = 0.36
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +2

Query: 422 PENGVATFIAEGMTKEKYPLIIATKYNVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDILE 601
           PE+ + TF+          L   + Y     LH       +  E +E D K+  NL++L 
Sbjct: 304 PESDLVTFLCYPSVMNLDDLTRRSLYLSDIPLHDATRDLVLMSEQFEADYKLTRNLELLT 363

Query: 602 D 604
           D
Sbjct: 364 D 364


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 11/32 (34%), Positives = 18/32 (56%)
 Frame = +2

Query: 500 NVPFLLHSPGTGYNVKGEIYEVDDKMLSNLDI 595
           NV  +L    T YN+   + ++D   L++LDI
Sbjct: 505 NVTNILSMDNTQYNLDLSLPQLDSTELADLDI 536


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +3

Query: 144 ENSKRNLVNCQKVIRFFKY 200
           ENS R L N   VI  +KY
Sbjct: 25  ENSPRKLANSMNVIHEWKY 43


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 144 ENSKRNLVNCQKVIRFFKYYN 206
           ENS RNL     VI  +KY++
Sbjct: 22  ENSPRNLEKSLNVIHEWKYFD 42


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,667
Number of Sequences: 438
Number of extensions: 3815
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19560480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)