Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O03
         (425 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   1.6  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   6.6  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   6.6  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 1.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 16  LIPTGFY*LTICNASIKII 72
           LIPTGF   T+C    K +
Sbjct: 766 LIPTGFDSCTVCTCDAKYL 784


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 113 VLLIMIPALGGLHYGWYK 166
           V+ +M   LGGL+  W K
Sbjct: 138 VMHLMFDTLGGLYSTWSK 155


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 20.6 bits (41), Expect = 6.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 113 VLLIMIPALGGLHYGWYK 166
           V+ +M   LGGL+  W K
Sbjct: 138 VMHLMFDTLGGLYSTWSK 155


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,647
Number of Sequences: 336
Number of extensions: 1624
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9490410
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)