Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_O03
         (425 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070695-1|AAL48166.1|   67|Drosophila melanogaster RH34302p pro...    41   8e-04
AE014297-2809|AAF55776.2|   67|Drosophila melanogaster CG15922-P...    41   8e-04
AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p pro...    28   6.0  
AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB...    28   6.0  
AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA...    28   6.0  

>AY070695-1|AAL48166.1|   67|Drosophila melanogaster RH34302p
           protein.
          Length = 67

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +2

Query: 95  FTTKNAVLLIMIPALGGLHYGWYKLQSVDSLVPDKDRSRLP 217
           F ++N V ++MIP+L G+H GW  +QS   LV + ++  +P
Sbjct: 7   FVSRNLVAVVMIPSLVGIHLGWSYMQSNRKLVTEAEQIEMP 47


>AE014297-2809|AAF55776.2|   67|Drosophila melanogaster CG15922-PA
           protein.
          Length = 67

 Score = 40.7 bits (91), Expect = 8e-04
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +2

Query: 95  FTTKNAVLLIMIPALGGLHYGWYKLQSVDSLVPDKDRSRLP 217
           F ++N V ++MIP+L G+H GW  +QS   LV + ++  +P
Sbjct: 7   FVSRNLVAVVMIPSLVGIHLGWSYMQSNRKLVTEAEQIEMP 47


>AY084199-1|AAL89937.1|  826|Drosophila melanogaster SD01613p
           protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/56 (23%), Positives = 31/56 (55%)
 Frame = +2

Query: 158 WYKLQSVDSLVPDKDRSRLPKWLQELGF*NINXKNKKTAVNVYRLMITLLI*NYIM 325
           W+ + SVDS   + + ++  +  + + F  +  +N+  A ++  L+ TLLI  +++
Sbjct: 230 WFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLV 285


>AE014296-2879|AAN11704.1|  697|Drosophila melanogaster CG6512-PB,
           isoform B protein.
          Length = 697

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/56 (23%), Positives = 31/56 (55%)
 Frame = +2

Query: 158 WYKLQSVDSLVPDKDRSRLPKWLQELGF*NINXKNKKTAVNVYRLMITLLI*NYIM 325
           W+ + SVDS   + + ++  +  + + F  +  +N+  A ++  L+ TLLI  +++
Sbjct: 101 WFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLV 156


>AE014296-2878|AAF49365.2|  826|Drosophila melanogaster CG6512-PA,
           isoform A protein.
          Length = 826

 Score = 27.9 bits (59), Expect = 6.0
 Identities = 13/56 (23%), Positives = 31/56 (55%)
 Frame = +2

Query: 158 WYKLQSVDSLVPDKDRSRLPKWLQELGF*NINXKNKKTAVNVYRLMITLLI*NYIM 325
           W+ + SVDS   + + ++  +  + + F  +  +N+  A ++  L+ TLLI  +++
Sbjct: 230 WFNIGSVDSFERNLEAAQTEQGTESINFVPVIYRNEVEAASLTGLLPTLLIIGFLV 285


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,172,666
Number of Sequences: 53049
Number of extensions: 249599
Number of successful extensions: 394
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 394
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)