Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_O02
(606 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 317 2e-86
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 310 2e-84
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 299 5e-81
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 196 5e-50
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 111 2e-24
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 8e-09
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 60 8e-09
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 60 8e-09
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 60 8e-09
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 60 8e-09
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 7.3
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 7.3
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 7.3
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 317 bits (778), Expect = 2e-86
Identities = 150/167 (89%), Positives = 162/167 (97%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPYGGGRPGRVKRKNAKKGQGG 184
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 310 bits (762), Expect = 2e-84
Identities = 148/167 (88%), Positives = 160/167 (95%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFEGNAL
Sbjct: 18 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
LRRLVR+GVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRV
Sbjct: 78 LRRLVRLGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL+SP G GRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLRSPTGVGRPGRVKRKNAKKGQGG 184
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 299 bits (734), Expect = 5e-81
Identities = 144/167 (86%), Positives = 156/167 (93%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNAL 282
R FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KDP+RLFEGNAL
Sbjct: 18 RSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKDPRRLFEGNAL 77
Query: 283 LRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRV 462
L RLV IGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RV
Sbjct: 78 LWRLVCIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRV 137
Query: 463 RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPXRVKRKNLRKGQGG 603
RKQVVNIPSFIVRLDS KHIDFSL SP+GGGRP RVKRKN +KGQGG
Sbjct: 138 RKQVVNIPSFIVRLDSQKHIDFSLCSPYGGGRPGRVKRKNAKKGQGG 184
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 196 bits (478), Expect = 5e-50
Identities = 93/103 (90%), Positives = 100/103 (97%)
Frame = +1
Query: 247 KDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHH 426
+DP+RLFEGNALLRRLVRIGVLDE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHH
Sbjct: 5 EDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHH 64
Query: 427 ARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGG 555
AR+LIRQRHIRVRKQVVNIPSFIVRLDS KHIDFSL+SP+GGG
Sbjct: 65 ARVLIRQRHIRVRKQVVNIPSFIVRLDSQKHIDFSLRSPYGGG 107
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 111 bits (266), Expect = 2e-24
Identities = 50/56 (89%), Positives = 56/56 (100%)
Frame = +1
Query: 103 RPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFE 270
RPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+RLFE
Sbjct: 9 RPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 8e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +1
Query: 133 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 312
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 313 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 492
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 493 IV 498
+V
Sbjct: 149 LV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 59.7 bits (138), Expect = 8e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +1
Query: 133 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 312
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 313 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 492
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 493 IV 498
+V
Sbjct: 149 LV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 59.7 bits (138), Expect = 8e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +1
Query: 133 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 312
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 313 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 492
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 493 IV 498
+V
Sbjct: 149 LV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 59.7 bits (138), Expect = 8e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +1
Query: 133 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 312
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 313 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 492
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 493 IV 498
+V
Sbjct: 149 LV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 59.7 bits (138), Expect = 8e-09
Identities = 36/122 (29%), Positives = 61/122 (50%)
Frame = +1
Query: 133 ELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVL 312
EL+++ Y L+ + + R +R+ AR L L E+D R+ ALL +L +G++
Sbjct: 30 ELRVLRRYRLQRREDYTRYNQLSRAVRELARRLRDLPERDQFRVRASAALLDKLYALGLV 89
Query: 313 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 492
+ L+ + F RRL T + K +A+ + A + Q H+RV VV P+F
Sbjct: 90 PTRG-SLELCDFVTASSFCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAF 148
Query: 493 IV 498
+V
Sbjct: 149 LV 150
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 509
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 509
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.3
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 369 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 509
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,377,318
Number of Sequences: 237096
Number of extensions: 1951850
Number of successful extensions: 4146
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4141
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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