Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N24
(490 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 3.1
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 7.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 7.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 7.0
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 9.3
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 9.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 9.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 9.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 9.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 9.3
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 3.1
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -3
Query: 359 LTLSRVFQVFCAEFFKTEVNCITCWHQVIVVYNLDERLYLGPLVDFI 219
L RV C+ +F+ + C H VIV+ ++ L LV+FI
Sbjct: 43 LKAHRVVLSACSPYFRELLKSTPCKHPVIVLQDV-AFSDLHALVEFI 88
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 7.0
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = -1
Query: 79 DQHYFTRLHYLTHLGGIFPLLVDI 8
+ HY + H THL G + V +
Sbjct: 120 NNHYTSHQHLRTHLRGTLTVNVSV 143
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 7.0
Identities = 5/7 (71%), Positives = 7/7 (100%)
Frame = +3
Query: 27 NIPPRWV 47
N+PPRW+
Sbjct: 676 NVPPRWI 682
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 7.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +3
Query: 123 ITTKVPPTSRTGMPSSLVSTGTP 191
IT + PP T VS GTP
Sbjct: 608 ITIQEPPQWHTRSTEKRVSAGTP 630
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 258 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 350
K++ YN ++Y + S + + +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 20.6 bits (41), Expect = 9.3
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +3
Query: 258 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 350
K++ YN ++Y + S + + +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 255 VKVVNYNHLMPTRYTV 302
V V+N++H P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 9.3
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +3
Query: 255 VKVVNYNHLMPTRYTV 302
V V+N++H P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.6 bits (41), Expect = 9.3
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 196 LPGVPVDTSDE 164
LPG P TSDE
Sbjct: 136 LPGKPTTTSDE 146
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,150
Number of Sequences: 438
Number of extensions: 2914
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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