Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N23
(623 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 234 1e-60
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 231 1e-59
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 230 2e-59
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 229 5e-59
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 225 7e-58
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 219 4e-56
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 217 2e-55
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 211 9e-54
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 210 3e-53
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 202 4e-51
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 197 2e-49
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 196 3e-49
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 188 9e-47
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 187 2e-46
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 186 4e-46
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 180 2e-44
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 176 4e-43
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 175 9e-43
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 168 8e-41
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 157 3e-37
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 152 8e-36
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 150 3e-35
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 146 3e-34
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 144 1e-33
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 144 1e-33
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 144 2e-33
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 138 1e-31
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 132 5e-30
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 132 9e-30
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 131 2e-29
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 128 8e-29
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 128 1e-28
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 127 2e-28
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 125 8e-28
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 124 1e-27
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 123 3e-27
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 121 1e-26
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 120 3e-26
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 117 2e-25
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 116 6e-25
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 115 8e-25
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 113 3e-24
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 112 7e-24
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 112 7e-24
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 111 2e-23
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 110 3e-23
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 110 3e-23
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 109 7e-23
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 109 7e-23
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 108 9e-23
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 108 9e-23
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 107 2e-22
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 105 7e-22
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 105 9e-22
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 103 5e-21
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 102 8e-21
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 101 1e-20
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 101 2e-20
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 100 2e-20
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 100 2e-20
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 99 4e-20
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 99 4e-20
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 99 1e-19
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 99 1e-19
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 98 1e-19
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 97 4e-19
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 96 7e-19
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 94 3e-18
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 93 4e-18
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 93 6e-18
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 93 6e-18
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 92 1e-17
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 91 1e-17
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 91 2e-17
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 91 3e-17
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 90 3e-17
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 87 3e-16
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 85 1e-15
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 85 1e-15
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 84 2e-15
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 80 5e-14
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 79 6e-14
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 79 9e-14
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 76 8e-13
UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1; Ha... 74 3e-12
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 71 2e-11
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 70 5e-11
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 69 9e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 67 3e-10
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 67 4e-10
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 63 5e-09
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 61 2e-08
UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1; Te... 57 3e-07
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 54 3e-06
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 51 3e-05
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 50 5e-05
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 49 8e-05
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 49 1e-04
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 48 2e-04
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 48 2e-04
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 47 4e-04
UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra ... 47 4e-04
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 47 4e-04
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 45 0.001
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 44 0.003
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 44 0.003
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 42 0.009
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 42 0.009
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 41 0.028
UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7; Locu... 40 0.048
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 40 0.048
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 36 1.0
UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1; Clon... 35 1.4
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 35 1.8
UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2; Crypto... 34 3.2
UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2; ... 33 5.6
UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI130... 33 5.6
UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: Sak... 33 7.3
UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n... 32 9.7
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 32 9.7
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 234 bits (573), Expect = 1e-60
Identities = 118/204 (57%), Positives = 134/204 (65%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPL+ N+AH G SV L IFSLHLAG+SS S
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTTINMKPPTIS 177
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
Q PLFV AV +TA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYILILP FGIISH+++ GKKE F FIV AHH+FTV +
Sbjct: 238 FGHPEVYILILPGFGIISHVVAYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGM 297
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFTSAT+IIA+PTG+K+F
Sbjct: 298 DVDTRAYFTSATMIIAIPTGVKVF 321
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 231 bits (565), Expect = 1e-59
Identities = 117/201 (58%), Positives = 132/201 (65%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G GTG TVYPPLS + H G SV L IFSLHLAG SS + D+
Sbjct: 105 GVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAGASSIMGAVNFITTILNMRSNLFNMDK 164
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 372
+ LF +V ITA GAIT+LLTDRN+NTSFFDP+GGGDPILYQHLF FFGH
Sbjct: 165 MSLFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPILYQHLFWFFGH 224
Query: 373 PEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXID 552
PEVYILILP FGIISH+I E GKKETF FIV AHH+FT+ + +D
Sbjct: 225 PEVYILILPGFGIISHMIFNESGKKETFGMLGMIYAMLTIGFLGFIVWAHHMFTIGMDVD 284
Query: 553 TRAYFTSATIIIAVPTGIKIF 615
TRAYFTSAT+IIA+PTGIKIF
Sbjct: 285 TRAYFTSATMIIAIPTGIKIF 305
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 230 bits (563), Expect = 2e-59
Identities = 115/204 (56%), Positives = 134/204 (65%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPL+ N+AH G SV L IFSLHLAG+SS +
Sbjct: 118 VEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAIT 177
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
Q PLFV +V +TA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 178 QYQTPLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 237
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYILILP FG+ISH+++ GKKE F FIV AHH+FTV +
Sbjct: 238 FGHPEVYILILPGFGMISHVVTYYAGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVGM 297
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFTSAT+IIA+PTG+K+F
Sbjct: 298 DVDTRAYFTSATMIIAIPTGVKVF 321
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 229 bits (559), Expect = 5e-59
Identities = 116/205 (56%), Positives = 134/205 (65%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V GAGTG TVYPPL+ N +H G SV L IFSLHLAG+SS
Sbjct: 117 MVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAGVSSILGAINFITTIINMKPPAM 176
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ Q PLFV +V ITA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF
Sbjct: 177 TQYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFW 236
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILILP FG+ISHI++ GKKE F FIV AHH+FTV
Sbjct: 237 FFGHPEVYILILPGFGMISHIVTYYSGKKEPFGYMGMVWAMMSIGFLGFIVWAHHMFTVG 296
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +DTRAYFTSAT+IIA+PTG+K+F
Sbjct: 297 MDVDTRAYFTSATMIIAIPTGVKVF 321
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 225 bits (550), Expect = 7e-58
Identities = 116/205 (56%), Positives = 135/205 (65%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V G+GTG TVYPPLS +H G +V LAIFSLHL+G+SS
Sbjct: 120 LVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSGVSSILGSINFITTIFNMRGPGM 179
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV +V +TAF GAIT+LLTDRN NT+FFDPAGGGDPILYQHLF
Sbjct: 180 TMHRLPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPILYQHLFW 239
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILILP FGIISHI+S G K F F+V AHH+FTV
Sbjct: 240 FFGHPEVYILILPGFGIISHIVSTFSG-KPVFGYLGMVYAMISIGVLGFLVWAHHMFTVG 298
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 299 LDVDTRAYFTAATMIIAVPTGIKIF 323
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 219 bits (535), Expect = 4e-56
Identities = 112/204 (54%), Positives = 132/204 (64%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
+LPLFV A+ +TA GAIT+LLTDRN NTSF+DPAGGGDPILYQHLF F
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLFWF 237
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYILI+P FG++SHI+S G K F F+V +HH++ V +
Sbjct: 238 FGHPEVYILIIPGFGMVSHIVSAFSG-KPVFGYLGMVYAMFSIGILGFLVWSHHMYAVGL 296
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 297 DVDTRAYFTAATMIIAVPTGIKIF 320
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 217 bits (529), Expect = 2e-55
Identities = 112/205 (54%), Positives = 133/205 (64%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V G GTG TVYPPLSS +H G +V LAIFSLH++G SS
Sbjct: 125 LVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISGASSILGAVNFISTILNMRSPGQ 184
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
S ++PLFV ++ +TAF GAIT+LLTDRN NTSFFD +GGGDPILYQHLF
Sbjct: 185 SMYRIPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPILYQHLFW 244
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILILP FG+ISHI+S +K F FIV AHH++TV
Sbjct: 245 FFGHPEVYILILPGFGMISHIVS-TFSRKPVFGYIGMVYAMVSIGVLGFIVWAHHMYTVG 303
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 304 LDVDTRAYFTAATMIIAVPTGIKIF 328
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 211 bits (516), Expect = 9e-54
Identities = 110/205 (53%), Positives = 127/205 (61%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V +GAGTG TVYPPLSS AH G SV LAIFSLHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
S ++PLFV A+ ITAF IT+LL DRN NTSFF+ AGGGDPI YQH F
Sbjct: 178 SMHKMPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPIFYQHAFW 237
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILI+P FGI+SHI+S KK F F+V +HH++ V
Sbjct: 238 FFGHPEVYILIIPGFGIVSHIVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVG 296
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ DTRAYFTSAT+IIA+PTGIKIF
Sbjct: 297 LDADTRAYFTSATMIIAIPTGIKIF 321
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 210 bits (512), Expect = 3e-53
Identities = 108/205 (52%), Positives = 129/205 (62%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V +GAGTG TVYPPLSS AH G SV LAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV ++ ITAF IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILI+P FGIISH++S KK F F+V +HH++ V
Sbjct: 238 FFGHPEVYILIIPGFGIISHVVS-TYSKKPVFGEISMVYAMASIGLLGFLVWSHHMYIVG 296
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ DTRAYFTSAT+IIA+PTGIKIF
Sbjct: 297 LDADTRAYFTSATMIIAIPTGIKIF 321
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 202 bits (494), Expect = 4e-51
Identities = 107/204 (52%), Positives = 124/204 (60%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
+ NG GTG T+YPPLS +H G SV LAIF LHL+GISS
Sbjct: 119 IENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSGISSLLGAMNFMTTTFNMRSPGIR 178
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
+L LF AV ITA G IT++LTDRN NTSFF+ AGGGDPILYQHLF F
Sbjct: 179 LHKLILFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPILYQHLFWF 238
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYILI+P FGIIS IS K F F+V +HH++TV +
Sbjct: 239 FGHPEVYILIIPGFGIISTTIS-ANSNKSVFGYLGMVYAMCSIGILGFVVWSHHMYTVGL 297
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 298 DVDTRAYFTAATLIIAVPTGIKIF 321
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 197 bits (481), Expect = 2e-49
Identities = 104/205 (50%), Positives = 123/205 (60%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
I+ NG GTG T+YPPLS +H V L IF LHL+GISS
Sbjct: 144 IIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSGISSLLGAINFIATLLNMRSPGI 203
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+L LF AV ITA AIT+LLTDRNLNTSF++ AGGGD ILYQHLF
Sbjct: 204 KLHKLALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAILYQHLFW 263
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILI+P FGIIS +IS K F FIV +HH++TV
Sbjct: 264 FFGHPEVYILIIPGFGIISTVIS-ANSNKNVFGYLGMVYAMMSIGLLGFIVWSHHMYTVG 322
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +DTRAYFT+AT+IIA+PTG+KIF
Sbjct: 323 LDVDTRAYFTAATLIIAIPTGVKIF 347
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 196 bits (479), Expect = 3e-49
Identities = 102/201 (50%), Positives = 120/201 (59%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G GTG TVYPPLSS +H G SV L IFS HL GI S
Sbjct: 125 GPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVGIGSIVAAINFICTIFYYKNEAMFNKD 184
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 372
LPLFV +V +T+F AIT+LL DRN NTSF+DP GGGD +LYQHLF FFGH
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVVLYQHLFWFFGH 244
Query: 373 PEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXID 552
PEVYILILP FG++SHII+ KK F FIV AHH++T I
Sbjct: 245 PEVYILILPGFGLVSHIIA-TFSKKRVFGHVPMIAAMLMIGLIGFIVWAHHMYTSGIDTS 303
Query: 553 TRAYFTSATIIIAVPTGIKIF 615
T+AYFT+AT++IA+PTGIK+F
Sbjct: 304 TKAYFTAATMVIAIPTGIKVF 324
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 188 bits (458), Expect = 9e-47
Identities = 98/202 (48%), Positives = 123/202 (60%)
Frame = +1
Query: 10 NGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 189
NGAGTG TVY PLS++ G +V +AI SLH+AG SS +
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASSILGAINFITTILNMRAPGMTLH 222
Query: 190 QLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 369
++PLFV +V +TAF AIT+LLTDRN T+F+D AGGGDP LYQHLF FFG
Sbjct: 223 KMPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDPELYQHLFWFFG 282
Query: 370 HPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXI 549
HPEVYI+ILP FGIIS I+S +K F F+V AHH+FT + +
Sbjct: 283 HPEVYIMILPGFGIISQIVS-TFSRKPVFGYLGMAYAMVAIGVVGFVVWAHHMFTTGMSV 341
Query: 550 DTRAYFTSATIIIAVPTGIKIF 615
+ + YFT+AT++IAVPTGIKIF
Sbjct: 342 NVKMYFTAATMVIAVPTGIKIF 363
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 187 bits (456), Expect = 2e-46
Identities = 93/205 (45%), Positives = 124/205 (60%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ GAG G T YPP+S+ R+V AIF++H++G SS
Sbjct: 223 MIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSGASSILGSINFITTFLNMRAPGM 282
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ ++PLF +V +TA+ GAIT+LLTDRN T+FFDPAGGGDPIL+QH+F
Sbjct: 283 TLHKVPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPILFQHIFW 342
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYI+ILP FG+ISHI++ KK F F+V AHH++TV
Sbjct: 343 FFGHPEVYIVILPAFGVISHIVA-TFSKKPIFGYLPMVYALVAIGGLGFVVWAHHMYTVG 401
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ + +AYF AT++IAVPTGIKIF
Sbjct: 402 MTLTQQAYFMVATMVIAVPTGIKIF 426
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 186 bits (453), Expect = 4e-46
Identities = 92/205 (44%), Positives = 124/205 (60%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV +V ITA +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILI+P FG++S I+ Q KK F F V +HH+FTV
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVG 313
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ D+RAYF+ A++IIA+PTG KIF
Sbjct: 314 LDADSRAYFSGASLIIAIPTGSKIF 338
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 180 bits (439), Expect = 2e-44
Identities = 92/151 (60%), Positives = 101/151 (66%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPL+ N+AH G SV LAIFSLHLAGISS S
Sbjct: 119 VEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAGISSILGAINFITTAINMKPPAIS 178
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
Q PLFV +V ITA IT+LLTDRNLNT+FFDPAGGGDPILYQHLF F
Sbjct: 179 QYQTPLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPILYQHLFWF 238
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETF 456
FGHPEVYILILP FG+ISH+++ GKKE F
Sbjct: 239 FGHPEVYILILPGFGMISHVVTYYAGKKEPF 269
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 176 bits (428), Expect = 4e-43
Identities = 90/131 (68%), Positives = 93/131 (70%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHLAGISS
Sbjct: 90 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRINKM 149
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
SFDQ+PLF+ AV ITA GAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 150 SFDQMPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 209
Query: 361 FFGHPEVYILI 393
FFGHPEVYILI
Sbjct: 210 FFGHPEVYILI 220
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 175 bits (425), Expect = 9e-43
Identities = 88/202 (43%), Positives = 116/202 (57%), Gaps = 1/202 (0%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G G G T+YPPLS++ G + LA+FSLH+AG+SS F
Sbjct: 123 GLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAGMSSIAGSINFLVTIFNMRMGALFFMS 182
Query: 193 L-PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 369
L P+ + + T+ +T+LL DR+ +TSF+ P GGGDPIL+QHLF FFG
Sbjct: 183 LNPMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPILWQHLFWFFG 242
Query: 370 HPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXI 549
HPEVYILILP FG+ISHI+ + K F F+V HH+F + I
Sbjct: 243 HPEVYILILPAFGVISHILCRSSAKLHVFGKIGMSWASMGIAWMGFLVWGHHMFVAGLDI 302
Query: 550 DTRAYFTSATIIIAVPTGIKIF 615
DTRAYFT+AT++IAVPTG+K+F
Sbjct: 303 DTRAYFTAATLMIAVPTGVKVF 324
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 168 bits (409), Expect = 8e-41
Identities = 86/127 (67%), Positives = 90/127 (70%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
IV NGAGTG TVYPPLSSNIAH G SV LAIFSLHLAGISS
Sbjct: 114 IVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAGISSILGAINFITTIINMRMNNL 173
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
SFDQ+PLFV AV ITAF GAIT+LLTDRNLNTSFFDPAGGGDPILYQHLF
Sbjct: 174 SFDQMPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPILYQHLFW 233
Query: 361 FFGHPEV 381
FFGHP++
Sbjct: 234 FFGHPKL 240
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 157 bits (380), Expect = 3e-37
Identities = 79/186 (42%), Positives = 106/186 (56%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV +V ITA +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILI+P FG++S I+ Q KK F F V +HH+FTV
Sbjct: 255 FFGHPEVYILIVPVFGVVSQIV-QVYAKKPIFGKIGMIYAMASIGFLGFCVWSHHMFTVG 313
Query: 541 IXIDTR 558
+ D R
Sbjct: 314 LDADKR 319
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 152 bits (368), Expect = 8e-36
Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGR-SVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 189
G GTG T+YPPLS+++ +V + IF L ++G++S +
Sbjct: 126 GGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVSGVASIMSSLNFITTVMHLRAKGLTLG 185
Query: 190 QLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 369
L + ++ IT+ G + +LL+D + NT FFDP GDPILYQHLF FFG
Sbjct: 186 ILSVSTWSLIITSGMLLLTLPVLTGGVLMLLSDLHFNTLFFDPTFAGDPILYQHLFWFFG 245
Query: 370 HPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXI 549
HPEVYILILP FG+ISH+IS + F +V HH++T + +
Sbjct: 246 HPEVYILILPAFGVISHVISTNY-CRNLFGNQSMILAMGCIAVLGSLVWVHHMYTTGLEV 304
Query: 550 DTRAYFTSATIIIAVPTGIKIF 615
DTRAYFTS TI+I++PTG K+F
Sbjct: 305 DTRAYFTSTTILISIPTGTKVF 326
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 150 bits (363), Expect = 3e-35
Identities = 78/204 (38%), Positives = 103/204 (50%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
+ G G+ T YPPLS S+ I LH GI S +
Sbjct: 129 IGGGPGSSWTFYPPLSVE-GQPELSLDTMILGLHTVGIGSLLGAINFMVTTQNMRSTAVT 187
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
DQ+ +FV +T+F G++ LL DRN NTSF+D GG+P+LYQHLF F
Sbjct: 188 LDQISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPLLYQHLFWF 247
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVY++ILP FGIIS + K F V HH++T +
Sbjct: 248 FGHPEVYVIILPVFGIISEAVLFLTDKDRLFGQTSMTFASIWIAVLGTSVWGHHMYTAGL 307
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
IDTR YF++AT+IIA+P+ +KIF
Sbjct: 308 DIDTRTYFSAATMIIAIPSAVKIF 331
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 146 bits (355), Expect = 3e-34
Identities = 78/205 (38%), Positives = 106/205 (51%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+ G G G T+YP L H + +F++HL GISS
Sbjct: 120 LTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLGISSILNSINLLGTLFCCRRKFF 179
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
SF LF+ A ITA G +T++L DRN NTSF+D GGGD IL+QH+F
Sbjct: 180 SFLSWSLFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLILFQHIFW 239
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYI++LP FG+IS I+ + G + F V AHH+F V
Sbjct: 240 FFGHPEVYIILLPVFGLISTIV-EVIGFRCVFSTVAMIYSMILIAILGMFVWAHHMFVVG 298
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +D+RAYF +I+I +PT +K+F
Sbjct: 299 MDVDSRAYFGGVSILIGLPTCVKLF 323
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 144 bits (350), Expect = 1e-33
Identities = 83/201 (41%), Positives = 102/201 (50%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G G G T+YPPLS G V +FSLHLAG+SS S
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSSLIGSVNFISTIFSRLSFNCS--- 272
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 372
+ V A T+ IT+LL DRN T+FF+P+GGGDPIL+QHLF FFGH
Sbjct: 273 --IIVWAYLFTSVLLLLSLPVLASGITMLLFDRNFGTAFFEPSGGGDPILFQHLFWFFGH 330
Query: 373 PEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXID 552
PEVY+LILP FGI+SHI +F +V HH+F V
Sbjct: 331 PEVYVLILPGFGIVSHICMSLSNNDSSFGYYGLICAMASIVCLGSVVWGHHMFMVGFDSL 390
Query: 553 TRAYFTSATIIIAVPTGIKIF 615
T +F+S T+II VPTGIK+F
Sbjct: 391 TGVFFSSITMIIGVPTGIKVF 411
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 144 bits (350), Expect = 1e-33
Identities = 67/108 (62%), Positives = 80/108 (74%)
Frame = +1
Query: 292 NLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXX 471
N T+FFDPAGGGD IL+QHLF FFGHPEVYILILP FG+ISH+I+ GK+E F
Sbjct: 191 NYYTTFFDPAGGGDXILFQHLFXFFGHPEVYILILPGFGMISHVIAHYSGKREPFGYLGM 250
Query: 472 XXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
F+V AHH+FTV + +DTRAYFT+AT+IIAVPTGIK+F
Sbjct: 251 VYAMIAIGVLGFLVWAHHMFTVGMDVDTRAYFTAATMIIAVPTGIKVF 298
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 144 bits (349), Expect = 2e-33
Identities = 83/200 (41%), Positives = 107/200 (53%)
Frame = +1
Query: 16 AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 195
A G T YPPLSS SV ++FSLHLAGI+S + L
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIASLISSCNFLVTMLATRTSL--WYSL 165
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 375
LF ++ + + IT++LTD++L T F+D GGDP+LYQHLF FFGHP
Sbjct: 166 SLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPLLYQHLFWFFGHP 225
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVY++ILP FG+ S I Q +V AHH++T + IDT
Sbjct: 226 EVYVVILPVFGLFSSSI-QLSSLHRIPGELSLVLAMASIALIGSVVWAHHMYTAGLDIDT 284
Query: 556 RAYFTSATIIIAVPTGIKIF 615
R+YFT+AT+IIAVPTGIKIF
Sbjct: 285 RSYFTAATMIIAVPTGIKIF 304
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 138 bits (334), Expect = 1e-31
Identities = 71/123 (57%), Positives = 79/123 (64%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TV PPLS+NIAH G SV LAIFSLH+AG+ S +
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXSILGAINFISTVLNMRPSGMT 96
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
++PLFV AV ITA GAIT+LLTDRN+NTSFFDPAGGGDPILYQHLF F
Sbjct: 97 PXRMPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPILYQHLFWF 156
Query: 364 FGH 372
GH
Sbjct: 157 XGH 159
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 132 bits (320), Expect = 5e-30
Identities = 73/199 (36%), Positives = 111/199 (55%), Gaps = 1/199 (0%)
Frame = +1
Query: 22 TG*TVYPPLSSNIAHR-GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLP 198
+G T+YPPLS+ A G ++ L++ +H+ GISS +F +
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISSTIGSVNYITTNKYNRHVGLTFMNIN 194
Query: 199 LFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPE 378
++ ++ +T+ AIT LL DRN+N++ +D G DP+LYQHLF FFGHPE
Sbjct: 195 IYNFSIIVTSILLIGSLPILGVAITGLLLDRNINSTIYDVIG--DPVLYQHLFWFFGHPE 252
Query: 379 VYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTR 558
VY++ILP FG+ S I++ K+ F + V AHH+FTV + ID+R
Sbjct: 253 VYVIILPVFGLTSLILTSII-HKDIFGREGMMYCIISIGVVGYFVWAHHMFTVGLDIDSR 311
Query: 559 AYFTSATIIIAVPTGIKIF 615
+YF+ AT II++PT +K+F
Sbjct: 312 SYFSIATSIISIPTSVKMF 330
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 132 bits (318), Expect = 9e-30
Identities = 68/123 (55%), Positives = 78/123 (63%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V GAGTG TVYPPL+S AH G SV +AIFSLHLAG+SS
Sbjct: 118 LVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAGLSSILGAMNFITTVMNMRTPGM 177
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ ++PLFV +V ITA GAIT+LLTDR NT+FFDPAGGGDPILYQHLF
Sbjct: 178 TMSRIPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPILYQHLFW 237
Query: 361 FFG 369
FFG
Sbjct: 238 FFG 240
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/37 (70%), Positives = 32/37 (86%)
Frame = +1
Query: 505 FIV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
FIV A H++ V + +DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 250 FIVWADHMYVVGMDVDTRAYFTAATMIIAVPTGIKIF 286
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 131 bits (316), Expect = 2e-29
Identities = 68/118 (57%), Positives = 74/118 (62%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V +GAGTG TVYPPLS N AH G SV LAIFSLHLAG+SS
Sbjct: 101 VESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAGVSSILGAVNFITTVINMRWGAMK 160
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 357
+ + LFV +V ITA GAIT+LLTDRN NTSFFDPAGGGDPILYQHLF
Sbjct: 161 IELVSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPILYQHLF 218
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 128 bits (310), Expect = 8e-29
Identities = 56/81 (69%), Positives = 62/81 (76%)
Frame = +3
Query: 291 KLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFWLFRN 470
K KYIIF S W F+STFILIFWT SLYFNFT IWYNFSYYF K KK N W+F +
Sbjct: 7 KFKYIIFWSSWSSWSYFMSTFILIFWTPSSLYFNFTSIWYNFSYYFPSKSKKGNLWVFSD 66
Query: 471 NLCYTSNWVIRIHCLSSSYIH 533
NLCY SNW+I I+CLSSSYI+
Sbjct: 67 NLCYISNWIISIYCLSSSYIY 87
Score = 38.3 bits (85), Expect = 0.15
Identities = 17/18 (94%), Positives = 18/18 (100%)
Frame = +1
Query: 562 YFTSATIIIAVPTGIKIF 615
YFTSAT+IIAVPTGIKIF
Sbjct: 97 YFTSATMIIAVPTGIKIF 114
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 128 bits (308), Expect = 1e-28
Identities = 66/118 (55%), Positives = 74/118 (62%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF 357
+LPLFV A+ +TA GAIT+LLTDRN NTSF+DPAGGGDPILYQHLF
Sbjct: 178 LHKLPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPILYQHLF 235
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 127 bits (306), Expect = 2e-28
Identities = 72/152 (47%), Positives = 85/152 (55%), Gaps = 4/152 (2%)
Frame = +1
Query: 1 IVXNGAGTG*TV----YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXX 168
I+ G GTG T+ YPPLS +H G SV LAIF+LHL+G+SS
Sbjct: 146 IIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFALHLSGVSSLLGSINFITTVANMR 205
Query: 169 XXXXSFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQ 348
+L LF + IT++LTDRN NTSFF+ AGGGDPIL+Q
Sbjct: 206 TPGIKLHKLALF-------GWATWSSRSRYFLGITMVLTDRNFNTSFFEVAGGGDPILFQ 258
Query: 349 HLF*FFGHPEVYILILPXFGIISHIISQERGK 444
HLF FFGHPEVYILI+P FGIIS IS K
Sbjct: 259 HLFWFFGHPEVYILIIPGFGIISTTISSSSNK 290
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/32 (75%), Positives = 30/32 (93%)
Frame = +1
Query: 520 HHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
HH++TV + +DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 349 HHMYTVGLDVDTRAYFTAATLIIAVPTGIKIF 380
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 125 bits (302), Expect = 8e-28
Identities = 66/132 (50%), Positives = 79/132 (59%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V +GAGTG TVYPPLSS AH G SV LAIF+LHL ISS
Sbjct: 118 LVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTSISSLLGAINFIVTTLNMRTNGM 177
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV ++ ITAF IT+LL DRN NTSFF+ +GGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPILYEHLFW 237
Query: 361 FFGHPEVYILIL 396
FFG I++L
Sbjct: 238 FFGQTVATIIML 249
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 124 bits (300), Expect = 1e-27
Identities = 71/201 (35%), Positives = 99/201 (49%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G+GTG T+YPPLS+++++ G + IF L AGI+S D+
Sbjct: 129 GSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIASTLSSVNFITTFTSVKTIGFVIDR 186
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 372
+ ++ +T+F ++ DR+ NT FF+ + GDP+LYQHLF FFGH
Sbjct: 187 ISPAAWSIVLTSFLLLLSLPVVTAVFLMVFLDRHYNTMFFESSNSGDPVLYQHLFWFFGH 246
Query: 373 PEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXID 552
PEVYI+ILP FGIIS ++S KE F +R
Sbjct: 247 PEVYIMILPGFGIISLLLSTYT-TKEMFGNQTMILAMGFNSFVRLFGLGTSYVHIRFGSR 305
Query: 553 TRAYFTSATIIIAVPTGIKIF 615
YFT+ TI+IA+PTG KIF
Sbjct: 306 YSRYFTTVTILIALPTGNKIF 326
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 123 bits (297), Expect = 3e-27
Identities = 75/197 (38%), Positives = 93/197 (47%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
G T YPPLS G L I SL L G SS +PLF
Sbjct: 138 GWTSYPPLSLLSGKWGEE--LWILSLLLVGTSSILGAINFVTTILKMRIKDMDLHSMPLF 195
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 384
A+ T+ A+ +L D TSFF+P GGGDP++YQHLF F+ HP VY
Sbjct: 196 CWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPVVYQHLFWFYSHPAVY 255
Query: 385 ILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAY 564
I+ILP FG+IS +I +K F IV AHH+FT R +
Sbjct: 256 IMILPFFGVISEVI-PVHARKPIFGYRAIAYSSLAISFLGLIVWAHHMFTSGTPGWLRMF 314
Query: 565 FTSATIIIAVPTGIKIF 615
F + T++IAVPTGIKIF
Sbjct: 315 FMATTMLIAVPTGIKIF 331
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 121 bits (292), Expect = 1e-26
Identities = 65/118 (55%), Positives = 74/118 (62%)
Frame = -1
Query: 356 NKC*YKIGSPPPAGSKNDVFKFRSVNNIVIAPXKTGSDNNNKNAVIXTAHTNKGN*SNDI 177
NKC + IGSPPPAGSK +VFKFRSV +IVIAP TGS++N+K AV T TN G S I
Sbjct: 1 NKC-WSIGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSMVI 59
Query: 176 LFNRXXXXXXXXXXXXXIDEIPAKCSEKIARXTDLPLCAILDESGG*TVHPVPAPFXT 3
+R I+E PAKC+EKI TD P CAI SGG TVHPVP P T
Sbjct: 60 PADRMLITVVMKFTAPKIEETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLST 117
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 120 bits (289), Expect = 3e-26
Identities = 62/123 (50%), Positives = 74/123 (60%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V +GAGTG TVYPPL+S AH G SV LAIF+LH+ ISS
Sbjct: 118 LVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTSISSLLGAINFIVTTLNMRTNGM 177
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV A+ ITA +T+LL DRN NTSFF+ AGGGDPILY+HLF
Sbjct: 178 TMHKLPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPILYEHLFW 237
Query: 361 FFG 369
FFG
Sbjct: 238 FFG 240
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 117 bits (282), Expect = 2e-25
Identities = 71/204 (34%), Positives = 94/204 (46%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V G Y PL+ V I + L G++S +
Sbjct: 136 VGGAPNVGWFAYAPLTQKQFAPTAGVDYWIVGIGLTGVASIAGALNFIVTILNMRAPGMT 195
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
+++PLFV + AF A LL DR+ T FF P GGD +L+QHLF F
Sbjct: 196 LNRMPLFVWMQLVVAFILIFAFPVLTVATIQLLFDRHFGTRFFLPNLGGDAVLWQHLFWF 255
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYILILP GIIS ++ +K F F+V AHH+F V +
Sbjct: 256 FGHPEVYILILPTMGIISEVL-PTFSRKPIFGYAFVAYSGVAIGFLGFLVWAHHMFAVGL 314
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
A+F +A+ +IAVPTG+KIF
Sbjct: 315 GPLANAFFGAASFLIAVPTGVKIF 338
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 116 bits (278), Expect = 6e-25
Identities = 66/193 (34%), Positives = 92/193 (47%)
Frame = +1
Query: 37 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 216
Y PLSS + V I L + GI S S ++PLFV +
Sbjct: 148 YVPLSSKAYSSLQGVDYWIIGLLIMGIGSVSGAINIFATIINLRAPGMSLQRVPLFVWMM 207
Query: 217 XITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 396
+ A A+ +LL DR L ++FFDP GG +L+QH F FGHPEVYILIL
Sbjct: 208 LMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAVLWQHYFWIFGHPEVYILIL 267
Query: 397 PXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSA 576
P FG+IS +I +K + + V AHH+F V + + +F
Sbjct: 268 PGFGMISEVI-PVFSRKPIYGYTFVAASSVAIVLLGYGVWAHHMFAVGLGMYADIFFAVG 326
Query: 577 TIIIAVPTGIKIF 615
+++IA+PTGIK+F
Sbjct: 327 SLLIAIPTGIKVF 339
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 115 bits (277), Expect = 8e-25
Identities = 66/195 (33%), Positives = 92/195 (47%)
Frame = +1
Query: 31 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 210
T YPP S N + L +F +HL G SS +F + LFV
Sbjct: 85 TGYPPFSLN--NDAGVTALYVFVMHLLGASSIATAVNFLVTYITMRAPGYTFFKTNLFVH 142
Query: 211 AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 390
+ GA+T+L D+ L T+FF+PA GGDP++YQ++F F+ HP VY+
Sbjct: 143 TLIAANVIQLVGVPSLAGAVTMLFLDKYLGTNFFNPAKGGDPLIYQNIFWFYSHPVVYVQ 202
Query: 391 ILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFT 570
+LP FG S II ++ F F + HH+F + TR F+
Sbjct: 203 VLPVFGFYSEII-PVFARRPLFGYTSMVFAVWAITAVSFFLWIHHMFVSGVPNWTRVLFS 261
Query: 571 SATIIIAVPTGIKIF 615
T++IAVPTGIKIF
Sbjct: 262 YTTLLIAVPTGIKIF 276
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 113 bits (272), Expect = 3e-24
Identities = 59/149 (39%), Positives = 87/149 (58%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV +V ITA +T+LL DRN NTSFF +GGGDP+LY+H+F
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHIFW 254
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKK 447
FFG +++ +I+ II++ I + KK
Sbjct: 255 FFG--QIWPIIIIIIIIINYAICGKDFKK 281
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 112 bits (269), Expect = 7e-24
Identities = 74/205 (36%), Positives = 100/205 (48%), Gaps = 5/205 (2%)
Frame = +1
Query: 16 AGTG*TVYPPLS-----SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
A TG T+Y PLS N A+ G V L + LHL+G+S+
Sbjct: 206 AQTGWTMYTPLSVGEGMGNQANAG--VDLMLLGLHLSGVSATMGSINFIATIFTERGKNV 263
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
S+ L +F + + AI +LL DRN TSFF AG G IL+QHLF
Sbjct: 264 SWANLDIFSWTILTQSGLILFAFPLLGSAIMMLLFDRNFGTSFF--AGEGGAILWQHLFW 321
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYI++LP GIIS+I+ + G++ F F V AHH+F
Sbjct: 322 FFGHPEVYIIVLPPMGIISYILPRFSGRR-LFGFKFVVYSTLAIGVLSFGVWAHHMFATG 380
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ RA F + ++ IAVP+ +K F
Sbjct: 381 LDPRLRASFMAVSLAIAVPSAVKTF 405
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 112 bits (269), Expect = 7e-24
Identities = 66/200 (33%), Positives = 98/200 (49%)
Frame = +1
Query: 16 AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 195
A T T+Y PLS ++ +V + + LHL G+S+ + L
Sbjct: 179 AQTSWTMYTPLSLQMS--SPAVDMMMLGLHLTGVSATMGAINFIATIFTERGEDVGWPDL 236
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 375
+F + + A+ +LL DRN T+FF AGG DPI +QHLF FFGHP
Sbjct: 237 DIFSWTMLTQSGLILFAFPLFGSALIMLLLDRNFGTTFFTVAGG-DPIFWQHLFWFFGHP 295
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVY+L+LP GI+S I+ + G+K F F V AHH+FT I
Sbjct: 296 EVYVLVLPPMGIVSLILPKFSGRK-LFGFKFVVYSTLAIGVLSFGVWAHHMFTTGIDPRI 354
Query: 556 RAYFTSATIIIAVPTGIKIF 615
R+ F + ++ I++P+ +K+F
Sbjct: 355 RSSFMAVSLAISIPSAVKVF 374
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 111 bits (266), Expect = 2e-23
Identities = 66/202 (32%), Positives = 91/202 (45%), Gaps = 2/202 (0%)
Frame = +1
Query: 16 AGTG*TVYPPLS--SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 189
A +G YPP+S + + H L I ++ L+GISS F
Sbjct: 146 ASSGWWSYPPMSLQNPLGHFINGEFLWILAVALSGISSIMGAINFVTTIIRMRAPGMGFF 205
Query: 190 QLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 369
++P+FV G +LL D + TSFF P GGGDP+L+QH F F+
Sbjct: 206 RMPVFVWTAWAAQTIQLIGLPALTGGAVMLLFDLSFGTSFFRPEGGGDPVLFQHFFWFYS 265
Query: 370 HPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXI 549
HP VY+L+LP FGI S + +K F IV AHH+F
Sbjct: 266 HPAVYVLVLPVFGIFSELF-PVYARKPLFGYRFVAIASFGITFLSLIVWAHHMFYTGTPN 324
Query: 550 DTRAYFTSATIIIAVPTGIKIF 615
R F T++IA+PTG+K+F
Sbjct: 325 WMRHIFMFTTMLIAIPTGVKVF 346
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 110 bits (264), Expect = 3e-23
Identities = 58/132 (43%), Positives = 74/132 (56%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V GAGTG TVY PL+ +H G +V LAIFSLHL+G SS
Sbjct: 123 LVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFSSLLGAINFITTFINMRTIGM 182
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
++ +PLF AV TA +T+ + DRN NTSFF+ AGGGD +LYQHLF
Sbjct: 183 KYENVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAVLYQHLFY 242
Query: 361 FFGHPEVYILIL 396
++ HPEV I+ L
Sbjct: 243 WWNHPEVKIICL 254
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 110 bits (264), Expect = 3e-23
Identities = 51/85 (60%), Positives = 61/85 (71%)
Frame = +1
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVYILILP FG+ISHI++ GKKE F FIV AHH+FTV
Sbjct: 2 FFGHPEVYILILPGFGMISHIVAYYSGKKEPFGYMGMVWAMMAIGLLGFIVWAHHMFTVG 61
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +DTRAYFTSAT+IIA+PTG+K+F
Sbjct: 62 MDVDTRAYFTSATMIIAIPTGVKVF 86
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 109 bits (261), Expect = 7e-23
Identities = 63/204 (30%), Positives = 97/204 (47%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V G G Y PLS G+ + + +S+ S
Sbjct: 134 VDTGPDIGWFAYVPLSGPQYAAGKRADIWAQMITFTEVSALAIAVEIVVTVFKQRAPGMS 193
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
D++PLFV ++ +T+F A T L+ DR + T FF+PA GGD +L+QHLF F
Sbjct: 194 LDRIPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGDVLLWQHLFWF 253
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
FGHPEVYI+ LP G++S I++ ++ F F + HH+F +
Sbjct: 254 FGHPEVYIIFLPAVGMVSSIVATFT-QRPVFGYLAMVMALIATGVLAFGLWVHHMFVAGL 312
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
++FT++++ IAVP G++IF
Sbjct: 313 PRLGESFFTASSMAIAVPAGLQIF 336
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 109 bits (261), Expect = 7e-23
Identities = 64/204 (31%), Positives = 93/204 (45%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V N A TG YPPL+ V I++L ++GI +
Sbjct: 163 VGNFARTGWVAYPPLAELGFSPDVGVDYYIWALQISGIGTTLTAINFLVTVIKMRAPGMK 222
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
+P+F GA+ +L DR L+ FF GG+ ++Y +LF
Sbjct: 223 LMDMPIFTWTCTWANVLIATSFPILTGALAMLALDRYLDFHFFTAELGGNAMMYLNLFWA 282
Query: 364 FGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRI 543
+GHPEVYIL+LP FGI S ++S GK+ F F+V HH FT+
Sbjct: 283 WGHPEVYILVLPAFGIFSEVVSTFAGKR-LFGHKSMIYASGAISVLGFMVWLHHFFTMGS 341
Query: 544 XIDTRAYFTSATIIIAVPTGIKIF 615
+ A+F AT+II++PTG+K+F
Sbjct: 342 GANVNAFFGIATMIISIPTGVKLF 365
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 108 bits (260), Expect = 9e-23
Identities = 63/207 (30%), Positives = 92/207 (44%), Gaps = 5/207 (2%)
Frame = +1
Query: 10 NGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFD 189
+G G T+YPPLS+ + V L + + +AG SS
Sbjct: 127 HGDSIGWTLYPPLST--ISKSIGVDLILLGIIIAGFSSTLTGINFILTITRLRRPDIKML 184
Query: 190 QLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFF-----DPAGGGDPILYQHL 354
+ LF +V + +LL +R+L FF DPA GDP L+QH+
Sbjct: 185 DMSLFAWSVLAASMLMVTALPPLAAGAIMLLLERHLGMHFFTPVPGDPAASGDPRLFQHI 244
Query: 355 F*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 534
F FFGHPEVYIL+LP G++S +I Q ++ + F V HH+FT
Sbjct: 245 FWFFGHPEVYILVLPAMGLVSEVI-QRMARRRAYGYTAIAISSVAIASISFAVWMHHMFT 303
Query: 535 VRIXIDTRAYFTSATIIIAVPTGIKIF 615
R AT+ +A+P+G+K+F
Sbjct: 304 AVQDFAPRVAMAIATMAVAIPSGVKVF 330
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 108 bits (260), Expect = 9e-23
Identities = 61/197 (30%), Positives = 92/197 (46%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
G T Y LS + +G + + L ++G+ + ++ +LPLF
Sbjct: 136 GWTSYASLS--LHSKGHGIDFFVLGLQISGLGTLIAGINFLATIINMRAPGMTYMRLPLF 193
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 384
+ + + +++ DR T+FF+P GG+ ++++HLF FGHPEVY
Sbjct: 194 TWTTFVASALILFAFPPLTVGLALMMLDRLFGTNFFNPELGGNTVIWEHLFWIFGHPEVY 253
Query: 385 ILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAY 564
ILILP FGI S +I +K F F+V HH+FT + A
Sbjct: 254 ILILPAFGIFSEVI-PVFARKRLFGYSSMVFAIVLIGFLGFMVWVHHMFTTGLGPIANAI 312
Query: 565 FTSATIIIAVPTGIKIF 615
F AT+ IA+PTGIKIF
Sbjct: 313 FAVATMAIAIPTGIKIF 329
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 107 bits (258), Expect = 2e-22
Identities = 62/205 (30%), Positives = 90/205 (43%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G T Y PL+SN G + L +AGI +
Sbjct: 157 VIGGSPNAGWTSYMPLASNDMSPGPGENYYLLGLQIAGIGTLMTGINFMVTILKMRTKGM 216
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ ++P+F IT A+ +L DR FF GG P+L+ +LF
Sbjct: 217 TLMRMPMFTWTTLITMVIIVFAFPVLTVALALLSFDRLFGAHFFTLEAGGMPMLWANLFW 276
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
+GHPEVYI+ILP FGI S IIS +K+ F F+V HH FT+
Sbjct: 277 IWGHPEVYIVILPAFGIFSEIIS-SFARKQLFGYKAMVGSIIAISVLSFLVWTHHFFTMG 335
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
++F+ T+ I++PTG+KIF
Sbjct: 336 NSASVNSFFSITTMAISIPTGVKIF 360
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 105 bits (253), Expect = 7e-22
Identities = 57/137 (41%), Positives = 79/137 (57%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G G+G T+YPPL+S +H G S+ +AIF+LHL+G+SS
Sbjct: 135 LIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSGLSSIFGAINLMVTIINMRANGM 194
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV +V ITA +T+LL DRN NTSFF +GGGDP+LY+H+
Sbjct: 195 DYSKLPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPLLYEHI-- 252
Query: 361 FFGHPEVYILILPXFGI 411
F+ +P V ILI GI
Sbjct: 253 FYKNP-VLILIWLTSGI 268
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 105 bits (252), Expect = 9e-22
Identities = 51/80 (63%), Positives = 58/80 (72%)
Frame = +1
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVYILILP FG+ISHIISQE GKKE F F+V AHH+FTV + +DT
Sbjct: 155 EVYILILPGFGMISHIISQESGKKEAFGTLGMIYAMMAIGLLGFVVWAHHMFTVGMDVDT 214
Query: 556 RAYFTSATIIIAVPTGIKIF 615
RAYFTSAT+IIAVPTGIK+F
Sbjct: 215 RAYFTSATMIIAVPTGIKVF 234
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 103 bits (246), Expect = 5e-21
Identities = 60/200 (30%), Positives = 87/200 (43%)
Frame = +1
Query: 16 AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 195
A TG YPPL+ G V I++L L+G+ + +
Sbjct: 166 AKTGWVAYPPLAGIQYSPGVGVDYYIWALQLSGLGTTLTGVNFLVTVMKMRAPGMKLMDM 225
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 375
P+F A+ +L DR L+ F GG+P++Y +LF +GHP
Sbjct: 226 PIFTWTCTWANVLIVASFPILTAALALLTVDRYLDFHIFTNELGGNPMMYVNLFWAWGHP 285
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVYILILP FG+ S + S GK+ F F V HH FT+
Sbjct: 286 EVYILILPAFGVFSEVTSTFAGKR-LFGHHSMIYASGAIAVLGFAVWLHHFFTMGAGASV 344
Query: 556 RAYFTSATIIIAVPTGIKIF 615
+F AT++I++PTG+K+F
Sbjct: 345 NTFFGLATMLISIPTGVKLF 364
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 102 bits (244), Expect = 8e-21
Identities = 63/206 (30%), Positives = 92/206 (44%), Gaps = 1/206 (0%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
++ G TG T Y P S AH +V +F + G SS
Sbjct: 146 MLNGGLDTGWTFYTPYS---AHTTTTVAPVLFGAFIIGFSSIVTGINFIVTCHTMRAPGI 202
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNL-NTSFFDPAGGGDPILYQHLF 357
++ ++PLFV A+ T+ G + +L+T NL FDPA GGDP+L+QHLF
Sbjct: 203 TWFKMPLFVWAIYATSCIQVLATPVI-GLLLVLVTVENLFGFGMFDPARGGDPVLFQHLF 261
Query: 358 *FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTV 537
F+ HP VYI++LP FG++S +++ +K F F HH+F
Sbjct: 262 WFYSHPAVYIMVLPSFGVMSEVVA-TYSRKNIFGYRAVAYSSLGIAFVGFFAWGHHMFVS 320
Query: 538 RIXIDTRAYFTSATIIIAVPTGIKIF 615
F T+I+ V T IK+F
Sbjct: 321 GQSTFAGGLFGVLTMIVGVFTAIKVF 346
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 101 bits (242), Expect = 1e-20
Identities = 70/212 (33%), Positives = 97/212 (45%), Gaps = 13/212 (6%)
Frame = +1
Query: 19 GTG*TVYPP--LSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G G T+YPP + S + + L + SL L I + +
Sbjct: 151 GAGWTLYPPQAILSGTPGQDWGIVLMLSSLILFIIGFTMGGLNYVVTVLQARTRGMTLMR 210
Query: 193 LPLFV*AV-XITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPA----------GGGDPI 339
LPL V + T G++ +LL DR L TSFF P GGG P+
Sbjct: 211 LPLTVWGIFTATVMALLAFPALFVGSVMLLL-DRLLGTSFFMPTLVEMGQLSKYGGGSPL 269
Query: 340 LYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 519
L+QHLF FFGHPEVYI+ LP FGI+S +IS +K F F+V A
Sbjct: 270 LFQHLFWFFGHPEVYIVALPAFGIVSDLIS-THARKNIFGYRMMVWAIVAIGALSFVVWA 328
Query: 520 HHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
HH++ + +F + T+IIA+PT IK++
Sbjct: 329 HHMYVSGMYPYFGFFFATTTLIIAIPTAIKVY 360
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 101 bits (241), Expect = 2e-20
Identities = 54/142 (38%), Positives = 74/142 (52%)
Frame = +1
Query: 190 QLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFG 369
++P+FV +T+ A+ +L+ DR +FF+ GG + YQHLF FG
Sbjct: 200 KMPVFVWTTLVTSAIIIFAFPSVTVALIMLMFDRTFAANFFEVLRGGSVVFYQHLFWTFG 259
Query: 370 HPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXI 549
HPEVYILILP GIIS +I +K F F V +HH+FTV +
Sbjct: 260 HPEVYILILPAMGIISEVI-PVHARKMLFGYSVMVFSTALIGFMGFTVWSHHMFTVGMGP 318
Query: 550 DTRAYFTSATIIIAVPTGIKIF 615
+ F+ T+ IAVPTG+KIF
Sbjct: 319 VVNSIFSLTTMAIAVPTGVKIF 340
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 100 bits (240), Expect = 2e-20
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Frame = +1
Query: 16 AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 195
AG G T Y PLS+N+ G L + ++ + G+SS ++ +L
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSSTMGAVNYITTVIRLRAPGMTYMRL 214
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPA-----GGGDPILYQHLF* 360
PL + + +TA A +LL DR+ T FF GGGDPIL+QHLF
Sbjct: 215 PLTIWGLWLTAILNALFVPVLGSAALLLLLDRSFGTEFFVAGASAVRGGGDPILWQHLFW 274
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FGHPEVYI+ILP +GI+ ++S K + + HH+F
Sbjct: 275 IFGHPEVYIMILPAWGILGDVLSFFARKPHHWYRGTVWAMVLVTVLSAMVY-GHHMFMTG 333
Query: 541 IXIDTRAYFTSATIIIAVPTGIKI 612
+ F T++I++P+ + +
Sbjct: 334 MSPLLGEGFMLFTLLISIPSMVVV 357
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 100 bits (240), Expect = 2e-20
Identities = 59/194 (30%), Positives = 92/194 (47%)
Frame = +1
Query: 34 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 213
+Y PLS++ G S + + LA I+S S ++P+ +
Sbjct: 170 MYVPLSTSAYTEGLSADFWLIGITLAEIASVTAAVEIIAAILCSRAPGMSLTKMPILMWY 229
Query: 214 VXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 393
+ TAF +L +R L FFD GGDP+L+QHLF FGHPEVYI+
Sbjct: 230 LLATAFMIAIAFPPLIIGSILLEAERLLGLPFFDHTLGGDPLLWQHLFWLFGHPEVYIIF 289
Query: 394 LPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTS 573
LP G+++ ++ G K F F + AHH+F + I + + F++
Sbjct: 290 LPAAGMVATMLPTFVG-KPLFGYGFAVAAVVTMSFLSFGLWAHHMFATGLPILSLSLFSA 348
Query: 574 ATIIIAVPTGIKIF 615
A+ ++AVPTG++IF
Sbjct: 349 ASTMVAVPTGVQIF 362
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 99 bits (238), Expect = 4e-20
Identities = 55/102 (53%), Positives = 59/102 (57%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
GAGTG TVYPPL+ N+AH G SV L IFSLHLAGISS S Q
Sbjct: 110 GAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAGISSILGAINFITTIMNMKPPAISQYQ 169
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDP 318
PLFV AV ITA IT+LLTDRNLNT+FFDP
Sbjct: 170 TPLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 99 bits (238), Expect = 4e-20
Identities = 69/207 (33%), Positives = 96/207 (46%), Gaps = 13/207 (6%)
Frame = +1
Query: 34 VYPPLSS---NIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
+YPPLS+ ++ G + + + S+ L IS SF +LPL
Sbjct: 177 IYPPLSALPQAMSGSGAGMTMWLISMALFIISVLLGGINYITTVINLRVKGMSFTRLPLT 236
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDP----AG------GGDPILYQHL 354
+ A ITA A +L+ DR+L TSFF AG GG P+L+QHL
Sbjct: 237 IWAFFITAIIGLLSFPVLFSAALLLIFDRSLGTSFFLSEIYIAGEALHHQGGSPVLFQHL 296
Query: 355 F*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFT 534
F F GHPEVYI+++P GI S +I+ +K F FIV AHH+F
Sbjct: 297 FWFLGHPEVYIVLIPALGITSEVIA-TNARKPIFGYKAMIGSILGIAVLSFIVWAHHMFV 355
Query: 535 VRIXIDTRAYFTSATIIIAVPTGIKIF 615
+ + F T+IIAVP+ +K F
Sbjct: 356 TGMNPFLGSVFMFLTLIIAVPSAVKSF 382
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 98.7 bits (235), Expect = 1e-19
Identities = 63/200 (31%), Positives = 87/200 (43%)
Frame = +1
Query: 16 AGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQL 195
A G T+Y PLS I G + I + GI S + ++
Sbjct: 148 ADFGWTMYSPLSDAIHSPGLGSDMWIVGVGATGIGSVASAINMLTTILCLRAPGMTMFRM 207
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 375
P+F + + + A +L DR L +DPA GG +L+QHLF FFGHP
Sbjct: 208 PIFTWNIFVVSVLALLIFPLLLAAALGVLYDRKLGGHLYDPANGGS-LLWQHLFWFFGHP 266
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVY+L LP FGI+S II +K F V AHH+F +
Sbjct: 267 EVYVLALPFFGIVSEII-PVFSRKPMFGYVGLIFATLSIGALSMAVWAHHMFVTGAVL-- 323
Query: 556 RAYFTSATIIIAVPTGIKIF 615
+F+ T +I+VPTG+K F
Sbjct: 324 LPFFSFMTFLISVPTGVKFF 343
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 98.7 bits (235), Expect = 1e-19
Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 1/192 (0%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
G T+Y PL++ I G + LA ++ L +S + ++P+F
Sbjct: 134 GWTLYAPLTARIYTPGIGLDLAALAIFLFSLSVTLGTINFLVTIAAMRAPGIGWFKMPMF 193
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFF-DPAGGGDPILYQHLF*FFGHPEV 381
++ T +LL DRNL T FF +PAGG +L+ HLF FFGHPEV
Sbjct: 194 TWSILFTVILMLWAFPPLMVGGALLLLDRNLGTEFFLNPAGGA--LLWDHLFWFFGHPEV 251
Query: 382 YILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRA 561
YIL+ P G ++ +IS G K + F+V HH+F I TR
Sbjct: 252 YILLFPALGAMADVISTFSG-KPIYAKRYILTAFLIATIISFVVWMHHMFITGTNIYTRL 310
Query: 562 YFTSATIIIAVP 597
+++ TI+I++P
Sbjct: 311 FYSITTILISIP 322
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 98.3 bits (234), Expect = 1e-19
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 3/199 (1%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRG-RSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ--L 195
G T P SSNI + G S + I S+ AGIS+ + +
Sbjct: 283 GWTFITPFSSNIKYTGVGSQDILILSVVFAGISTTISFTNLLITRRTLAMPGMRHRRVLM 342
Query: 196 PLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHP 375
P ++ +T A+ ++ DR+ T+FF+ A GGDPIL QHLF FFGHP
Sbjct: 343 PFVTISIFLTLRMLATITPVLGAAVIMMAFDRHWQTTFFEYAYGGDPILSQHLFWFFGHP 402
Query: 376 EVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDT 555
EVY+LI+P FG I+ I+ ++ ++V HH++ V + +
Sbjct: 403 EVYVLIIPTFGFINMIVPHNNTRR-VASKHHMIWAIYVMAYMGYLVWGHHMYLVGLDHRS 461
Query: 556 RAYFTSATIIIAVPTGIKI 612
R +++ TI+I++P IK+
Sbjct: 462 RTMYSTITIMISMPATIKV 480
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 96.7 bits (230), Expect = 4e-19
Identities = 67/216 (31%), Positives = 97/216 (44%), Gaps = 14/216 (6%)
Frame = +1
Query: 10 NGAGTG*TVYPPLS---SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+GA G T YPPLS ++ G + L + + G+SS
Sbjct: 155 HGAAAGWTSYPPLSDMTTSAPSSGAAQTLWLLGVTTVGVSSMLGSVNYMTTIIQMRAPGM 214
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDP-----------AGG 327
+ +LPL + A+ ITA A ++L DR + T FF P AGG
Sbjct: 215 TMFRLPLTIWAMFITALLQAFALPVLTAAGFMMLADRLIGTGFFLPEGLVVNNSPMAAGG 274
Query: 328 GDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 507
G P+L+QHLF F+ HP VYI+ILP G++S I++ +K F F
Sbjct: 275 GQPLLWQHLFWFYSHPAVYIMILPAMGMVSDILAC-FSRKPIFGYKPMVYSICGIAGLGF 333
Query: 508 IV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
IV HH+F + F AT++IA+P+ +K F
Sbjct: 334 IVWGHHMFVSGMNPGLGMTFMVATMMIALPSAVKTF 369
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 95.9 bits (228), Expect = 7e-19
Identities = 62/205 (30%), Positives = 90/205 (43%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
I+ A TG YPPLS V +S+ ++GI +
Sbjct: 156 IIGEFAKTGWLGYPPLSEKTFSPWVGVDYWNWSIQISGIGTIISSINFITTILKLRKKKL 215
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
F+++ +F+ + + + DR L+T F+ GG +LY +L
Sbjct: 216 FFNKISIFMWTCLCSNILILISFPILTILLFQIFLDRTLSTHFYSSFYGGQQMLYINLIW 275
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
+GHPEVYILILP FGI S IIS K F F+V HH FT+
Sbjct: 276 AWGHPEVYILILPSFGIFSEIISY-ICVKSVFSYISLIYATISITVLSFLVWLHHFFTMG 334
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ +F+ +T+IIA+PTG+KIF
Sbjct: 335 SGYLSNIFFSISTMIIAIPTGVKIF 359
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 93.9 bits (223), Expect = 3e-18
Identities = 59/197 (29%), Positives = 91/197 (46%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
G T Y P S+ + G LA ++ L G SS S ++P++
Sbjct: 138 GWTFYYPFSAQ-SESGVDFYLA--AILLLGFSSLLGNANFVATIYNLRAQGMSLWKMPIY 194
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 384
V +V + A ++L +R + S+F+PA GGDP+L+Q F F+ HP VY
Sbjct: 195 VWSVFAASVLNLFSLAGLTAATLLVLLERKIGLSWFNPAVGGDPVLFQQFFWFYSHPTVY 254
Query: 385 ILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAY 564
+++LP GI++ + S +K F +V AHH+FTV +
Sbjct: 255 VMLLPYLGILAEVAS-TFARKPLFGYRQMVWAQMGIVVLGTMVWAHHMFTVGESTLFQIA 313
Query: 565 FTSATIIIAVPTGIKIF 615
F T +IAVPTG+K+F
Sbjct: 314 FAFFTALIAVPTGVKLF 330
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 93.5 bits (222), Expect = 4e-18
Identities = 60/193 (31%), Positives = 81/193 (41%)
Frame = +1
Query: 37 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 216
YPP + + + G V I+SL LA + S +PLF
Sbjct: 193 YPPYTETLYNPGIGVDYWIWSLTLASLGSTLTGINIAVTIYKKRAPGMKLYYMPLFTWTA 252
Query: 217 XITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 396
TA L DR L+ FF GG+ + + ++F FGHPEVYILIL
Sbjct: 253 LCTAIMMIFAMPPLTVVTLQLALDRYLDFHFFTNGLGGNQMNFLNMFWLFGHPEVYILIL 312
Query: 397 PXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSA 576
P FG+ S I S G K F F+V HH FT+ A F A
Sbjct: 313 PAFGVYSEIFSTFSG-KVLFGYKSLVWATISIAFLSFLVWLHHFFTMGQSGHINAVFGIA 371
Query: 577 TIIIAVPTGIKIF 615
+++I +PTG+KI+
Sbjct: 372 SMLIGIPTGVKIY 384
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 92.7 bits (220), Expect = 6e-18
Identities = 56/205 (27%), Positives = 84/205 (40%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXX 180
+V GA TG T Y P S+ + V L F L G SS
Sbjct: 139 MVQGGADTGWTFYTPYSTTTITKVVPVLLGAFIL---GFSSILTGLNFIVTTHTMRAPGM 195
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
+ +LPLFV ++ T+ ++ ++ + FDPA GGDP+L+QH F
Sbjct: 196 GWTRLPLFVWSIYATSVIQILATPVLGMSLLLVAVEHAFGWGIFDPARGGDPVLFQHFFW 255
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
F+ HP VYI++LP +IS ++ +K F F HH+FT
Sbjct: 256 FYSHPAVYIMVLPAMAVISEVVC-AFSRKNIFGYKAVAYSSLGIAFVGFFTWGHHMFTSG 314
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
F ++ + + T IK+F
Sbjct: 315 QSAFNGGVFGVLSMFVGIFTAIKVF 339
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 92.7 bits (220), Expect = 6e-18
Identities = 54/193 (27%), Positives = 84/193 (43%)
Frame = +1
Query: 37 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 216
Y PL+S G ++ + + L GIS+ S D+LP+ V
Sbjct: 165 YVPLTSLDYSAGANIDIYGLGMILLGISTTGGAANFVVTLLRMRAHGMSIDRLPIIVWGT 224
Query: 217 XITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 396
+ A +L DRN T FFD A GG P+L+QHLF F HP VY+++L
Sbjct: 225 LTASVSNLVAVPSVSLAFLLLWLDRNAGTHFFDVAHGGRPLLWQHLFWMFAHPWVYVVVL 284
Query: 397 PXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSA 576
P GI+S + ++ F V HH+F I A+F +A
Sbjct: 285 PAMGIVSDAL-PTFCRRPLVAYEAVAVSTVATMLIGFEVWVHHMFATGIAPLALAFFGAA 343
Query: 577 TIIIAVPTGIKIF 615
+++I++P+ + +F
Sbjct: 344 SMLISIPSAVAVF 356
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 91.9 bits (218), Expect = 1e-17
Identities = 54/194 (27%), Positives = 87/194 (44%)
Frame = +1
Query: 34 VYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*A 213
+YPPL+ G + + + IS+ S ++P+F A
Sbjct: 154 MYPPLTLKEYSPGDNADFWLLGIGFIEISAIAGAIEIIVGTLRTRPPGMSLTRMPIFAWA 213
Query: 214 VXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILI 393
+ I A A +L +R+ FF GGDP+L+QHLF FFGHPEVYI+
Sbjct: 214 MLIFAAMIMIAFPAVILATMLLEIERSFGWPFFTAERGGDPLLWQHLFWFFGHPEVYIIF 273
Query: 394 LPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTS 573
LP G++S I+ + F + HH+FT I + +F++
Sbjct: 274 LPAAGLVSMIV-PTMARHPLVGYRLIVVALIGTGFFSFGLWVHHMFTTGIPSLSLGFFSA 332
Query: 574 ATIIIAVPTGIKIF 615
A++ +A+P+GI++F
Sbjct: 333 ASMAVAIPSGIQVF 346
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 91.5 bits (217), Expect = 1e-17
Identities = 56/198 (28%), Positives = 86/198 (43%)
Frame = +1
Query: 22 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 201
+G +YPPLSS + G + + + IS+ S ++P+
Sbjct: 140 SGWFMYPPLSSTLGAPGINSDFWLIGITFVEISAIAAAVEITVTVLRYRAPGMSLSKMPI 199
Query: 202 FV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 381
F +TA +L +R + FF A GGD +L+QHLF FGHPEV
Sbjct: 200 FAWYALVTAVMILTGFPPLILGSILLELERAFDMPFFQAAAGGDALLWQHLFWLFGHPEV 259
Query: 382 YILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRA 561
YI+ LP G IS I+ + F + HH+FT I A
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTGLLGYGWIVAAAVALGVLSFGLWVHHMFTTGIPHLGLA 318
Query: 562 YFTSATIIIAVPTGIKIF 615
+F++A+ ++AVPT +++F
Sbjct: 319 FFSAASTLVAVPTAVQLF 336
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 91.1 bits (216), Expect = 2e-17
Identities = 58/193 (30%), Positives = 88/193 (45%)
Frame = +1
Query: 37 YPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AV 216
YPPL+ G + + IS+ S +++P+FV AV
Sbjct: 152 YPPLAGASFSPGLGLDFYTTVVTFMEISALVAAIELIATIFKCKVPGMSLNRMPIFVWAV 211
Query: 217 XITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILIL 396
+ +F A +L DR FF A GDPIL+QHLF FFGHPEVYI+ +
Sbjct: 212 LVMSFMIVFALPPLVIASLMLALDRMAGMHFFT-AASGDPILWQHLFWFFGHPEVYIIFI 270
Query: 397 PXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSA 576
P G++S II ++ F F + HH+FT + +FT++
Sbjct: 271 PALGMVSSIIITFT-QRPIFGYIPIVLSIVAIGFIGFGLWVHHMFTAGLPQLGSNFFTAS 329
Query: 577 TIIIAVPTGIKIF 615
+ +IA+P+G++IF
Sbjct: 330 SAMIAIPSGVQIF 342
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 90.6 bits (215), Expect = 3e-17
Identities = 58/195 (29%), Positives = 87/195 (44%), Gaps = 2/195 (1%)
Frame = +1
Query: 34 VYPPLS-SNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 210
+Y PLS + G L +L L+G+SS + ++PLFV
Sbjct: 127 MYAPLSVETTVNYGLGTNLIQIALILSGLSSTLTGVNFVMTITKMKKV--PYLKMPLFVW 184
Query: 211 AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYIL 390
TA + +R T FFD A GG P+L+Q LF FFGHPEVYIL
Sbjct: 185 GFFTTAILMIIAMPSLTAGLVFAYLERLWGTPFFDSALGGSPVLWQQLFWFFGHPEVYIL 244
Query: 391 ILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI-V*AHHIFTVRIXIDTRAYF 567
ILP G++S ++ + ++E F + V HH+FT +
Sbjct: 245 ILPAMGLVSELL-PKMARREIFGYTAIALSSIAIAFLSALGVWMHHMFTAIDNTLVQIVS 303
Query: 568 TSATIIIAVPTGIKI 612
++ T+ IA+P+G+K+
Sbjct: 304 SATTMAIAIPSGVKV 318
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 90.2 bits (214), Expect = 3e-17
Identities = 56/198 (28%), Positives = 86/198 (43%)
Frame = +1
Query: 22 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 201
+G +YPPL+S + G + + + IS+ S D++P+
Sbjct: 140 SGWFMYPPLASTLGSPGINSDFWLLGITFVEISAIAAAVEIVVTVLRFRAPGMSLDRMPI 199
Query: 202 FV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 381
+ +TA +L +R FF A GGD +L+QHLF FGHPEV
Sbjct: 200 YGWYALVTATMILTGFPPLILGSILLELERAFGLPFFQVAEGGDSLLWQHLFWLFGHPEV 259
Query: 382 YILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRA 561
YI+ LP G IS I+ + E F + HH+FT I A
Sbjct: 260 YIIFLPAAGAISTIL-PVMARTELIGYRWVVAAAISLAVLSFGLWVHHMFTTGIPHMGLA 318
Query: 562 YFTSATIIIAVPTGIKIF 615
F++A+ ++AVPT +++F
Sbjct: 319 LFSAASTLVAVPTAVQLF 336
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 87.0 bits (206), Expect = 3e-16
Identities = 56/197 (28%), Positives = 84/197 (42%)
Frame = +1
Query: 25 G*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLF 204
G T Y PL+ + G SV + L+ G+ S ++P+F
Sbjct: 145 GWTFYYPLTMDGNQTGVSVFMVAVILN--GLGSLLGSANFAATIVNLRAPGMGLWKMPVF 202
Query: 205 V*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVY 384
++ T+ A + + L S F+P GG P+LYQ F F+ HP VY
Sbjct: 203 AWSIFATSILQLLTLGGLTAAALLTYLEIKLGLSMFNPGIGGVPVLYQQFFWFYSHPAVY 262
Query: 385 ILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAY 564
+++LP GI + + S +K F IV HH+F V I +
Sbjct: 263 VMLLPYLGIGAEVAS-TMARKPLFGYRVMVYSMLAIVLVSCIVWLHHMFAVGIPEAWQIA 321
Query: 565 FTSATIIIAVPTGIKIF 615
F +T+I+AVPTG+KIF
Sbjct: 322 FMISTLIVAVPTGVKIF 338
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/145 (32%), Positives = 70/145 (48%)
Frame = +1
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF* 360
++ +LP V T A+ +L DR L T FF GG+ +LY +LF
Sbjct: 240 TWSRLPFVVWTSLTTNIIALTAFPILGVALAMLGADRYLGTHFFTAGLGGNLMLYTNLFW 299
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
+GHPEVY ++LP FG IS II +K F + V HH FT+
Sbjct: 300 IWGHPEVYFVVLPAFGFISEII-PTFAEKPLFGYATMVIATFAIGGISWGVWLHHFFTMG 358
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+F++AT+++ +PTG+K+F
Sbjct: 359 AGPGINIFFSTATMLVGIPTGVKVF 383
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 85.0 bits (201), Expect = 1e-15
Identities = 50/192 (26%), Positives = 85/192 (44%)
Frame = +1
Query: 40 PPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVX 219
PPL++ G + + + IS+ + ++P+F A+
Sbjct: 215 PPLTTETYSPGYNADFWLLGIGFIEISAIAGAIEIIVGILRTRSPGMTLGRMPVFAWAML 274
Query: 220 ITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 399
+ A A +L +R + FF GGDP+L+QHLF FFGHPEVYI+ LP
Sbjct: 275 VFALMIVFAFPAVILATALLELERAFHWPFFAAHLGGDPLLWQHLFWFFGHPEVYIIFLP 334
Query: 400 XFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSAT 579
G++S I+ + F + HH+FT I + ++F +A+
Sbjct: 335 AAGMVSMIV-PTMARTPLVGYRFVVLALVGTAFLSFGLWVHHMFTTGIPQLSLSFFQAAS 393
Query: 580 IIIAVPTGIKIF 615
+A+P+G+++F
Sbjct: 394 TAVAIPSGMQVF 405
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 84.2 bits (199), Expect = 2e-15
Identities = 53/192 (27%), Positives = 82/192 (42%)
Frame = +1
Query: 40 PPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVX 219
PP S I+ G + + IF L + GISS S Q+PL +
Sbjct: 133 PPYSV-ISAPGPAADMWIFGLKILGISSILGSINFIVTILKCKHPDMSLGQVPLLAWSYL 191
Query: 220 ITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILP 399
++ A+ +LLTDR + FF+PA GGDPI Y HLF F HPEVY+L++P
Sbjct: 192 SSSLIVLVALPTFAAALLMLLTDRLGVSGFFNPAVGGDPIAYAHLFWFTFHPEVYVLVIP 251
Query: 400 XFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSAT 579
G++ ++ + +K + F AHH+F + + F T
Sbjct: 252 AIGMMYEMVPR-FSRKPIYSYNSGLFAFVLLTIVGFSSWAHHMFATGMSFTEKTVFMLGT 310
Query: 580 IIIAVPTGIKIF 615
+ + + +F
Sbjct: 311 LAAVPASAMHVF 322
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.8 bits (188), Expect = 5e-14
Identities = 59/215 (27%), Positives = 88/215 (40%), Gaps = 14/215 (6%)
Frame = +1
Query: 13 GAGTG*TVYP---PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
G G T YP L+ G + + + G SS +
Sbjct: 159 GPAAGWTSYPVLADLAQAAPGSGTAQTYWLLGVTFVGFSSMMGSINYMTTIINMRAPGMT 218
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAG-----------GG 330
F +LP+ + + ITA + + DR T FF P+G GG
Sbjct: 219 FFRLPMTIWGLFITAILQAFALPVLTAGGFMQVADRLFGTCFFYPSGLVINNAAPTVGGG 278
Query: 331 DPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 510
P+L+QHLF F+ HP VYI++LP G++S ++S +K F FI
Sbjct: 279 QPLLWQHLFWFYSHPAVYIMLLPIMGMVSDMLSC-MCRKPLFGYKPMVFSMSAIASLGFI 337
Query: 511 V*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
V HH+FT + F +T++IA+P+ IK F
Sbjct: 338 VWGHHMFTSGMNPAVGMAFMVSTMMIALPSAIKTF 372
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 79.4 bits (187), Expect = 6e-14
Identities = 37/110 (33%), Positives = 59/110 (53%)
Frame = +1
Query: 286 DRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXX 465
+R + FFDP GGDP+L+QHLF FGHPEVYI+ LP + + I+ ++
Sbjct: 254 ERGFDWPFFDPERGGDPLLWQHLFWIFGHPEVYIIFLPLIALAAMIV-PTAARQPIVGYS 312
Query: 466 XXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
F + HH+FT + + +F++A+ + +PTGI++F
Sbjct: 313 WIVLSAVGTGFLSFGLWVHHMFTTGLPALSLGFFSAASEAVVIPTGIQLF 362
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 79.0 bits (186), Expect = 9e-14
Identities = 36/85 (42%), Positives = 47/85 (55%)
Frame = +1
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHPEVY+LILP FGI+SHI F +V AHH+F V
Sbjct: 1 FFGHPEVYVLILPVFGIVSHICMTFTNNDSLFGYYGLVLAMLAIVCLGSVVWAHHMFMVG 60
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ T +F+S T++I +PTGIK+F
Sbjct: 61 YDVHTAVFFSSVTMVIGIPTGIKVF 85
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 75.8 bits (178), Expect = 8e-13
Identities = 48/153 (31%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Frame = +1
Query: 181 SFDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAG-----------G 327
S ++P+ A IT+ A +L DR TSFF P+G G
Sbjct: 214 SLMRMPICTWAWFITSCIALLAFAVLLPACILLCLDRVAGTSFFIPSGLVFNDHVIPHGG 273
Query: 328 GDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXF 507
G +L+QHLF FFGHPEVYI ILP GI+SHI+ ++ +
Sbjct: 274 GSALLWQHLFWFFGHPEVYIAILPAMGIVSHILINSM-RRPLLSHRVVIGSMISIGFLSY 332
Query: 508 IV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGI 606
+V HH+F + + F+ T+II +P +
Sbjct: 333 VVWGHHMFVSGMNPLSSLVFSFPTLIITIPATV 365
>UniRef50_Q6RJT8 Cluster: Cytochrome c oxidase subunit 2; n=1;
Harmonia axyridis|Rep: Cytochrome c oxidase subunit 2 -
Harmonia axyridis (Multicolored Asian lady beetle)
Length = 193
Score = 73.7 bits (173), Expect = 3e-12
Identities = 30/57 (52%), Positives = 36/57 (63%)
Frame = +3
Query: 348 TFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLS 518
+ ++IFW+S SLYFN IWYNF YY+T K K W F NNLCY S W I +S
Sbjct: 2 SLVMIFWSSSSLYFNSPSIWYNFPYYYTSKSGKNCLWFFSNNLCYISYWTSSICSMS 58
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 70.9 bits (166), Expect = 2e-11
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +1
Query: 31 TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV* 210
T YPP S I H + FS+ L G +S +++L +FV
Sbjct: 130 TGYPPYSI-ITHG--NTAFYTFSVLLLGFASILGGVNFLTTVTFMRAPGIGWNKLNIFVW 186
Query: 211 AVXITAFXXXXXXXXXXG-AITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEVYI 387
A + AF G A+T+L D+ + T FFD A GGD + YQ+LF F+ HP VY+
Sbjct: 187 AT-LAAFVLQLIFVPVLGTAVTMLTFDKYIGTHFFDAAAGGDALTYQNLFWFYSHPAVYV 245
Query: 388 LILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRAYF 567
+ LP ++ I++ + V HH++ + R
Sbjct: 246 IFLPFMAMVFEIVATFARNRVFNYKMVVYGGIGGIVLLSGEVWIHHLYVTGMPDWLRVGQ 305
Query: 568 TSATIIIAVPTGIKI 612
T++I++P G+ +
Sbjct: 306 MVTTVLISIPVGLMV 320
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 69.7 bits (163), Expect = 5e-11
Identities = 32/79 (40%), Positives = 48/79 (60%)
Frame = +1
Query: 379 VYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTR 558
VY++ILP FG++SH + + G + + V AHH+FTV + +DTR
Sbjct: 1 VYVIILPVFGLVSHSLHRG-GLFSLYNMLGMVYAMIAIAVVGYFVWAHHMFTVGLDVDTR 59
Query: 559 AYFTSATIIIAVPTGIKIF 615
YF+SAT++IA+PT IK+F
Sbjct: 60 VYFSSATLLIALPTSIKVF 78
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 68.9 bits (161), Expect = 9e-11
Identities = 37/83 (44%), Positives = 46/83 (55%)
Frame = +1
Query: 43 PLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVXI 222
PL+S+IAH G SV +AIFSLHLAG+SS + D++PLF+ AV I
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSSILGSVNFMTTVINMRAKGMTLDRVPLFIWAVFI 131
Query: 223 TAFXXXXXXXXXXGAITILLTDR 291
T GAIT+LLTDR
Sbjct: 132 TTVLLLLSLPVLAGAITMLLTDR 154
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 67.3 bits (157), Expect = 3e-10
Identities = 37/75 (49%), Positives = 43/75 (57%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
V GAGTG TVYPPLS +H G SV LAIFSLHL+GISS +
Sbjct: 118 VEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSGISSMLGAMNFITTVLNMRNPGMT 177
Query: 184 FDQLPLFV*AVXITA 228
+LPLFV A+ +TA
Sbjct: 178 LHKLPLFVWAIFVTA 192
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Frame = +1
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFF-----------DPAGGGDPI 339
+P+F ++ +T + A+ IL +D L T++F D G +
Sbjct: 192 IPIFSLSINLTVWMMLFAFAALLAALMILASDHILGTTYFQYSIDGTTMATDADNPGASL 251
Query: 340 LYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*A 519
L+ HLF FFGHPEVYI+ P G+++ G++ F+V
Sbjct: 252 LWAHLFWFFGHPEVYIVFFPALGVMAECFQTFTGRR-LVGRKWFIISMVLVALQSFVVWM 310
Query: 520 HHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
HH+F I + + F + TI I++P + +F
Sbjct: 311 HHMFLTGINLPIKTIFMATTIGISLPFDLMVF 342
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 63.3 bits (147), Expect = 5e-09
Identities = 42/120 (35%), Positives = 49/120 (40%)
Frame = +1
Query: 4 VXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXS 183
+ G G VYPP SS +AH +V L IF LHLAGISS +
Sbjct: 108 IGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAGISSXLGSMNFLVTLGNMKXKGLN 167
Query: 184 FDQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*F 363
+ LF AIT+L R N SFF P G P + F F
Sbjct: 168 YGNFSLFCWXXVXXXXXLILSXPVLAAAITMLXXXRXXNXSFFXPXXXGXPXXFPTFFXF 227
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 60.9 bits (141), Expect = 2e-08
Identities = 51/197 (25%), Positives = 76/197 (38%)
Frame = +1
Query: 22 TG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPL 201
TG TVY PLSS A ++ L GI + LPL
Sbjct: 154 TGWTVYEPLSSFKFTPYLGADTAAAAVVLRGIGTIIASTEILATIFKARAKGYRMMNLPL 213
Query: 202 FV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGHPEV 381
FV AV A G +LL ++ S++ GG +++++LF +FGHPEV
Sbjct: 214 FVWAVFWVAAISWFVFPEITGLFFLLLVGNLMHASYYISNYGG-ALMWENLFWYFGHPEV 272
Query: 382 YILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXIDTRA 561
Y+L+LP G + +S + + +V HH F I
Sbjct: 273 YLLLLPGTGAMFDYLS-NLNHRPPYLKKWMIAAMGAISVDSVMVFLHHTFMTGIVFAWLM 331
Query: 562 YFTSATIIIAVPTGIKI 612
+ T I++PT + I
Sbjct: 332 ADSIFTETISIPTSMLI 348
>UniRef50_O99652 Cluster: Cytochrome c oxidase subunit I; n=1;
Tetragona dorsalis ziegleri|Rep: Cytochrome c oxidase
subunit I - Tetragona dorsalis ziegleri
Length = 111
Score = 57.2 bits (132), Expect = 3e-07
Identities = 30/70 (42%), Positives = 39/70 (55%)
Frame = +1
Query: 187 DQLPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FF 366
DQ+ LF ++ IT G IT+LL+DRN N FF GG PIL+Q++ F
Sbjct: 12 DQINLFSWSISITVNLSILSLPMLAGTITMLLSDRNFNKFFFILIGGEYPILHQYMLWLF 71
Query: 367 GHPEVYILIL 396
GH +V LIL
Sbjct: 72 GHTDVLFLIL 81
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 54.0 bits (124), Expect = 3e-06
Identities = 26/41 (63%), Positives = 29/41 (70%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISS 123
+V G G G TVYPPL+S + H G SV AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/33 (72%), Positives = 26/33 (78%)
Frame = +1
Query: 1 IVXNGAGTG*TVYPPLSSNIAHRGRSVXLAIFS 99
+V NGAGTG TVYPPLSS AH G SV LAI+S
Sbjct: 33 MVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 50.4 bits (115), Expect = 3e-05
Identities = 25/56 (44%), Positives = 28/56 (50%)
Frame = +3
Query: 204 CMSCXDYSXXXXXXXXXXXWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWT 371
CM C +Y S+Y IIN K KY IF W P +STFILIFWT
Sbjct: 97 CMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSPYSLSTFILIFWT 152
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 50.0 bits (114), Expect = 5e-05
Identities = 45/197 (22%), Positives = 68/197 (34%)
Frame = +1
Query: 13 GAGTG*TVYPPLSSNIAHRGRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQ 192
G TG YPPL+ N G + + ++S S +
Sbjct: 218 GFQTGWWGYPPLAQN---SGSGIVWYVLGAATILVASLLGAINIAGTMVYMRAKGMSLGR 274
Query: 193 LPLFV*AVXITAFXXXXXXXXXXGAITILLTDRNLNTSFFDPAGGGDPILYQHLF*FFGH 372
+P+FV + A + L+D + F+ G P+ Y F F H
Sbjct: 275 VPIFVWGLFAAATTLVVESPATYTGALMDLSDMIAGSHFYT-GPTGHPLAYLDQFWFLFH 333
Query: 373 PEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVRIXID 552
PEVY+ ILP F I I+ K+ F + HH FT +
Sbjct: 334 PEVYVFILPAFAIWLEIL-PAAAKRPLFARGWAIAGLVGVSMSGAMSGVHHYFTA-VSDA 391
Query: 553 TRAYFTSATIIIAVPTG 603
F + T +++PTG
Sbjct: 392 RMPIFMTITETVSIPTG 408
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 49.2 bits (112), Expect = 8e-05
Identities = 21/33 (63%), Positives = 27/33 (81%)
Frame = +1
Query: 517 AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
AHH+ TV + DTRAYF++ TI+IA+PTG KIF
Sbjct: 2 AHHMMTVGLEGDTRAYFSAMTIMIAIPTGTKIF 34
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/30 (70%), Positives = 27/30 (90%)
Frame = +1
Query: 526 IFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
++ V + +DTRAYFT+AT+IIAVPTGIKIF
Sbjct: 1 MYVVGMDVDTRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 547 IDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFTSAT+IIAVPTGIKIF
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIF 24
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +1
Query: 547 IDTRAYFTSATIIIAVPTGIKIF 615
+DTRAYFTSAT+IIAVPTGIKIF
Sbjct: 2 VDTRAYFTSATMIIAVPTGIKIF 24
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 46.8 bits (106), Expect = 4e-04
Identities = 18/32 (56%), Positives = 26/32 (81%)
Frame = +1
Query: 520 HHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
HH+FTV + ++T +F+S T+II VPTGIK+F
Sbjct: 53 HHMFTVGLDVNTAVFFSSVTMIIRVPTGIKVF 84
>UniRef50_Q9MFX8 Cluster: Cytochrome oxidase I; n=5; Echinometra
lucunter|Rep: Cytochrome oxidase I - Echinometra
lucunter
Length = 199
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/62 (37%), Positives = 31/62 (50%)
Frame = +3
Query: 348 TFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSY 527
T ILI W S+Y F IW +F+ T FW+ N L + SNW I C+S +
Sbjct: 1 TPILILWPPSSIYSYFAGIWNDFARNRTLFSNASTFWVPGNGLRHDSNWSPSIPCMSPPH 60
Query: 528 IH 533
+H
Sbjct: 61 VH 62
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 46.8 bits (106), Expect = 4e-04
Identities = 23/84 (27%), Positives = 40/84 (47%)
Frame = +1
Query: 361 FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV*AHHIFTVR 540
FFGHP VY + P FG + + I K+ F ++ HH+ T
Sbjct: 2 FFGHPVVYYVPFPLFGALYYYI-PIYAKRSLFSEKWARWNIFLLAIGSMLIWVHHLQTFP 60
Query: 541 IXIDTRAYFTSATIIIAVPTGIKI 612
+ +D RA+ T +T+++A +G+ +
Sbjct: 61 LPVDLRAWITVSTLVLASGSGLTV 84
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +1
Query: 541 IXIDTRAYFTSATIIIAVPTGIKIF 615
+ + TRAYFTSAT+IIAVPTGIKIF
Sbjct: 1 LTLHTRAYFTSATMIIAVPTGIKIF 25
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +1
Query: 508 IV*AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
+V HH+F V + T +F+S T+II VPTGIK+F
Sbjct: 26 VVWLHHMFMVGFDVKTAVFFSSVTMIIGVPTGIKVF 61
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/30 (53%), Positives = 25/30 (83%)
Frame = +1
Query: 526 IFTVRIXIDTRAYFTSATIIIAVPTGIKIF 615
++T + +DTRA+FTS TI+I++PTG K+F
Sbjct: 1 MYTTGLEVDTRAFFTSTTILISIPTGTKVF 30
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 42.3 bits (95), Expect = 0.009
Identities = 23/51 (45%), Positives = 26/51 (50%)
Frame = +3
Query: 207 MSCXDYSXXXXXXXXXXXWSYYNIINRSKLKYIIF*SCWRRRPNFISTFIL 359
M C +YS WSYYN IN SKLKYI+F F+ST IL
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILFWPSSSWGSYFMSTPIL 134
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 42.3 bits (95), Expect = 0.009
Identities = 25/92 (27%), Positives = 42/92 (45%)
Frame = +1
Query: 337 ILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFIV* 516
+L+ LF F+GHP VY + P FG + + I Q G + + V
Sbjct: 224 LLWAILFWFYGHPVVYYVPFPLFGALYYYIPQYAG-RSLYSEKWARWNIYLLAIGTMGVW 282
Query: 517 AHHIFTVRIXIDTRAYFTSATIIIAVPTGIKI 612
HH+ T + I R + +T+I+A +G+ +
Sbjct: 283 VHHLQTWPLPIVLREWVNLSTLILATGSGLTV 314
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 40.7 bits (91), Expect = 0.028
Identities = 19/27 (70%), Positives = 23/27 (85%)
Frame = +1
Query: 535 VRIXIDTRAYFTSATIIIAVPTGIKIF 615
V + + RAYFTSAT+IIA+PTGIK F
Sbjct: 296 VGMXVXPRAYFTSATMIIAIPTGIKAF 322
>UniRef50_Q9B9T9 Cluster: Cytochrome oxidase subunit 1; n=7;
Locustacarus buchneri|Rep: Cytochrome oxidase subunit 1
- Locustacarus buchneri
Length = 185
Score = 39.9 bits (89), Expect = 0.048
Identities = 26/92 (28%), Positives = 40/92 (43%)
Frame = +3
Query: 219 DYSXXXXXXXXXXXWSYYNIINRSKLKYIIF*SCWRRRPNFISTFILIFWTS*SLYFNFT 398
+Y+ S +N N SKL++I+ S PN I ILI T L+ N T
Sbjct: 94 NYNNTTDYFTTSSSRSNHNTTNSSKLQHILLRSFGGSGPNPIPASILILRTPSGLHSNST 153
Query: 399 XIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNW 494
I ++ +K N ++NNL ++ W
Sbjct: 154 SIRNRITHLHNIFSQKSNILYYKNNLRHSIYW 185
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 39.9 bits (89), Expect = 0.048
Identities = 27/78 (34%), Positives = 35/78 (44%)
Frame = +1
Query: 70 GRSVXLAIFSLHLAGISSXXXXXXXXXXXXXXXXXXXSFDQLPLFV*AVXITAFXXXXXX 249
G L IFSL + S + D++ L ++ ITA
Sbjct: 124 GSXXXLXIFSLXIXXXSXIFSAXNFISXIINMRHTMLTMDKISLLSWSILITAVLLLLSL 183
Query: 250 XXXXGAITILLTDRNLNT 303
GAIT+LLTDRN+NT
Sbjct: 184 PVLAGAITMLLTDRNMNT 201
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 35.5 bits (78), Expect = 1.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 325 GGDPILYQHLF*FFGHPEVYILILPXFGIISHIISQERG 441
G DP+L + LF F GHP VY +LP + + + Q+ G
Sbjct: 224 GTDPVLARTLFWFTGHPIVYFWLLPAYISWYNFVPQQAG 262
>UniRef50_Q9TAP7 Cluster: Cytochrome oxidase subunit 1; n=1;
Clonorchis sinensis|Rep: Cytochrome oxidase subunit 1 -
Clonorchis sinensis
Length = 120
Score = 35.1 bits (77), Expect = 1.4
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = -1
Query: 623 SHXKILIPVGTAIIIVAEVKYARVSIXIRTVNI**AQT 510
+H K LIPVGT +I+V E+K V TVN+ AQT
Sbjct: 57 NHEKTLIPVGTPMIMVTELKKTAVPKSSPTVNMWWAQT 94
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 34.7 bits (76), Expect = 1.8
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +1
Query: 331 DPILYQHLF*FFGHPEVYILILPXFGIISHI---ISQERGK 444
+P+L + LF FFGHP VY +LP + + I I E+GK
Sbjct: 209 NPLLARTLFWFFGHPVVYFWLLPAYVALYTILPKIVSEKGK 249
>UniRef50_Q5CTJ9 Cluster: Cation-transporting ATPase; n=2;
Cryptosporidium|Rep: Cation-transporting ATPase -
Cryptosporidium parvum Iowa II
Length = 1434
Score = 33.9 bits (74), Expect = 3.2
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +3
Query: 351 FILIFWT--S*SLYFNFTXIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSS 524
+I+ FW+ S SLYFN + N + T KK N L + +C+ + + S +
Sbjct: 558 YIIPFWSTSSMSLYFNNAIKYLNSEHILTTNPKKLNQLLLVDTICFDKTGTLTVPTFSIN 617
Query: 525 YIH 533
+H
Sbjct: 618 NVH 620
>UniRef50_Q8II85 Cluster: Putative uncharacterized protein; n=2;
Plasmodium|Rep: Putative uncharacterized protein -
Plasmodium falciparum (isolate 3D7)
Length = 1420
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = -1
Query: 290 RSVNNIVIAPXKTGSDNNNKNAVIXTAHTNKGN*SNDILFN 168
+++NN +I S NNN N++ T TN + +N+I +N
Sbjct: 1038 KTINNNIINDTSQSSYNNNMNSIQNTNRTNSSSSNNNISYN 1078
>UniRef50_Q8I2P3 Cluster: Putative uncharacterized protein PFI1305w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI1305w - Plasmodium falciparum
(isolate 3D7)
Length = 1327
Score = 33.1 bits (72), Expect = 5.6
Identities = 14/46 (30%), Positives = 20/46 (43%)
Frame = +3
Query: 393 FTXIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIRIHCLSSSYI 530
F IW ++ + KK +W N++ YTS W I YI
Sbjct: 1045 FNIIWIKIKTWYKKIDKKEKYWKRYNDILYTSQWKNNIQDNELEYI 1090
>UniRef50_Q48874 Cluster: SakB; n=2; Lactobacillus sakei|Rep: SakB -
Lactobacillus sakei
Length = 430
Score = 32.7 bits (71), Expect = 7.3
Identities = 22/67 (32%), Positives = 35/67 (52%)
Frame = +3
Query: 324 RRRPNFISTFILIFWTS*SLYFNFTXIWYNFSYYFTRKRKKRNFWLFRNNLCYTSNWVIR 503
RRR FI+ F I + +LY + + + S YF K KK N +L N+L + + +
Sbjct: 35 RRRVLFIAVFFPITFLV-ALYSDISNVIPILSGYFILKEKKENDYLLLNDLLFCTFIIFG 93
Query: 504 IHCLSSS 524
+ LSS+
Sbjct: 94 CNVLSSN 100
>UniRef50_UPI000065DB35 Cluster: UPI000065DB35 related cluster; n=1;
Takifugu rubripes|Rep: UPI000065DB35 UniRef100 entry -
Takifugu rubripes
Length = 110
Score = 32.3 bits (70), Expect = 9.7
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 306 IF*SCWRRRPNFISTFILIFWTS*SLYFNFTXIW-YNFSYYFTRKRKKRNFWLFRNNLCY 482
++ SCW +++ T +F TS Y+ +T W Y + +T + WLF + Y
Sbjct: 48 LYTSCWLYTSHWLYTSCWLF-TS---YWLYTSRWLYTSCWLYTSHWLYTSCWLFTSRWLY 103
Query: 483 TSNWV 497
TS W+
Sbjct: 104 TSRWL 108
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 32.3 bits (70), Expect = 9.7
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 1/96 (1%)
Frame = +1
Query: 331 DPILYQHLF*FFGHPEVYILILPXFGIISHIISQERGKKETFXXXXXXXXXXXXXXXXFI 510
D + ++ F FFGHP VY ++P I I+ + G E F
Sbjct: 206 DVLEWRLWFWFFGHPLVYFWLVPAVTIWYTILPRVLG-TEVFSKTAAKAAFMLYLIASVP 264
Query: 511 V*AHHIFTVRIXIDTRAYF-TSATIIIAVPTGIKIF 615
V HH F Y T T ++AVP+ I F
Sbjct: 265 VGLHHQFVDPGVHPVYKYLHTVLTYLVAVPSFITAF 300
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 396,231,855
Number of Sequences: 1657284
Number of extensions: 6172265
Number of successful extensions: 16991
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 15077
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16695
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 45636850930
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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