Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N20
(574 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal pro... 114 7e-26
AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p pro... 114 7e-26
AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA... 114 7e-26
BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p pro... 65 7e-11
BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p pro... 39 0.004
BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p pro... 39 0.004
BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p pro... 39 0.004
AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p pro... 39 0.004
AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA... 39 0.004
AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-P... 29 5.9
>X15109-1|CAA33207.1| 239|Drosophila melanogaster ribosomal
protein protein.
Length = 239
Score = 114 bits (275), Expect = 7e-26
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 381 PGXAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWG 560
P AKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNGVF+ LN AT+NMLRIA PYI WG
Sbjct: 74 PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 133
Query: 561 YPNL 572
YPNL
Sbjct: 134 YPNL 137
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/79 (37%), Positives = 46/79 (58%)
Frame = +2
Query: 161 LPAVPESVLKHRKRREALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXERDEIR 340
LPAVPES LK K++ + R + LK+ + + +E RAE+Y EY E+ EI+
Sbjct: 1 LPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNEYIKAEQREIK 60
Query: 341 LARQARNRGNYYVPGXSQI 397
L R A+ R +YVP +++
Sbjct: 61 LRRLAKKRNQFYVPAEAKL 79
>AY089648-1|AAL90386.1| 252|Drosophila melanogaster RH04903p
protein.
Length = 252
Score = 114 bits (275), Expect = 7e-26
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 381 PGXAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWG 560
P AKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNGVF+ LN AT+NMLRIA PYI WG
Sbjct: 87 PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 146
Query: 561 YPNL 572
YPNL
Sbjct: 147 YPNL 150
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 131 PVKGKEDSKKLPAVPESVLKHRKRREALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKE 310
PV K +KKLPAVPES LK K++ + R + LK+ + + +E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 311 YRIXERDEIRLARQARNRGNYYVPGXSQI 397
Y E+ EI+L R A+ R +YVP +++
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKL 92
>AE014134-1774|AAF52868.1| 252|Drosophila melanogaster CG4897-PA
protein.
Length = 252
Score = 114 bits (275), Expect = 7e-26
Identities = 52/64 (81%), Positives = 57/64 (89%)
Frame = +3
Query: 381 PGXAKLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWG 560
P AKLAFV+RIRGIN+V+PKVRKVLQLF LRQINNGVF+ LN AT+NMLRIA PYI WG
Sbjct: 87 PAEAKLAFVVRIRGINKVAPKVRKVLQLFRLRQINNGVFIKLNKATINMLRIAEPYITWG 146
Query: 561 YPNL 572
YPNL
Sbjct: 147 YPNL 150
Score = 65.3 bits (152), Expect = 6e-11
Identities = 35/89 (39%), Positives = 52/89 (58%)
Frame = +2
Query: 131 PVKGKEDSKKLPAVPESVLKHRKRREALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKE 310
PV K +KKLPAVPES LK K++ + R + LK+ + + +E RAE+Y E
Sbjct: 4 PVVKKPAAKKLPAVPESKLKFSKKQISKRVAESKRRLKKAAVIALRKKENLVRAEKYQNE 63
Query: 311 YRIXERDEIRLARQARNRGNYYVPGXSQI 397
Y E+ EI+L R A+ R +YVP +++
Sbjct: 64 YIKAEQREIKLRRLAKKRNQFYVPAEAKL 92
>BT028802-1|ABI34183.1| 227|Drosophila melanogaster LP23547p
protein.
Length = 227
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/60 (48%), Positives = 40/60 (66%)
Frame = -3
Query: 569 VGVSPSNVRXGDT*HIHSSXIQXYKHTIVYLAQXKQLQNFTDLR*NLVDTTDSDDKCQFG 390
+G++P +V GD H+ +Q +HT+V L Q +QLQN DL +LVDT D+DDK QFG
Sbjct: 48 IGIAPGDVGLGDAQHVDGGLVQLDEHTVVDLPQTEQLQNLADLGSHLVDTADTDDKGQFG 107
>BT029578-1|ABL75637.1| 257|Drosophila melanogaster IP16905p
protein.
Length = 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 158 KLPAVPESVLKHRKRR----EALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXE 325
KLP SVLKHRKRR E++ T + +K+R++ K F+RAE +V Y E
Sbjct: 10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTAT--KNHHKFRRAESFVMGYLKAE 67
Query: 326 RDEIRL 343
R R+
Sbjct: 68 RTSKRI 73
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 393 KLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWGYPNL 572
KL FV+R G + + + +N VF+ +LR+ P++ +G P+L
Sbjct: 96 KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155
>BT029555-1|ABL75615.1| 257|Drosophila melanogaster IP16805p
protein.
Length = 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 158 KLPAVPESVLKHRKRR----EALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXE 325
KLP SVLKHRKRR E++ T + +K+R++ K F+RAE +V Y E
Sbjct: 10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTAT--KNHHKFRRAESFVMGYLKAE 67
Query: 326 RDEIRL 343
R R+
Sbjct: 68 RTSKRI 73
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 393 KLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWGYPNL 572
KL FV+R G + + + +N VF+ +LR+ P++ +G P+L
Sbjct: 96 KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155
>BT021218-1|AAX33366.1| 257|Drosophila melanogaster RH63749p
protein.
Length = 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 158 KLPAVPESVLKHRKRR----EALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXE 325
KLP SVLKHRKRR E++ T + +K+R++ K F+RAE +V Y E
Sbjct: 10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTAT--KNHHKFRRAESFVMGYLKAE 67
Query: 326 RDEIRL 343
R R+
Sbjct: 68 RTSKRI 73
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 393 KLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWGYPNL 572
KL FV+R G + + + +N VF+ +LR+ P++ +G P+L
Sbjct: 96 KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155
>AY071314-1|AAL48936.1| 257|Drosophila melanogaster RE33833p
protein.
Length = 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 158 KLPAVPESVLKHRKRR----EALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXE 325
KLP SVLKHRKRR E++ T + +K+R++ K F+RAE +V Y E
Sbjct: 10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTAT--KNHHKFRRAESFVMGYLKAE 67
Query: 326 RDEIRL 343
R R+
Sbjct: 68 RTSKRI 73
Score = 31.9 bits (69), Expect = 0.63
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +3
Query: 393 KLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWGYPNL 572
KL FV+R+ G + + + +N VF+ +LR+ P++ +G P+L
Sbjct: 96 KLLFVMRLAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155
>AE014134-2146|AAF53155.2| 257|Drosophila melanogaster CG5317-PA
protein.
Length = 257
Score = 39.1 bits (87), Expect = 0.004
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 158 KLPAVPESVLKHRKRR----EALRTXRLQVTLKRRSSAIKKXREIFKRAEQYVKEYRIXE 325
KLP SVLKHRKRR E++ T + +K+R++ K F+RAE +V Y E
Sbjct: 10 KLPGKTVSVLKHRKRRILQDESVVTQKRNDRIKKRTAT--KNHHKFRRAESFVMGYLKAE 67
Query: 326 RDEIRL 343
R R+
Sbjct: 68 RTSKRI 73
Score = 29.9 bits (64), Expect = 2.6
Identities = 15/60 (25%), Positives = 27/60 (45%)
Frame = +3
Query: 393 KLAFVIRIRGINQVSPKVRKVLQLFXLRQINNGVFVXLNXATVNMLRIAXPYIAWGYPNL 572
KL FV+R G + + + +N VF+ +LR+ P++ +G P+L
Sbjct: 96 KLLFVMRHAGKKIFDKTTADIFRTLRMGSRHNAVFMENTKENQLLLRVIEPFVVYGNPSL 155
>AE014297-4130|AAF56715.1| 448|Drosophila melanogaster CG13972-PA
protein.
Length = 448
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/38 (28%), Positives = 23/38 (60%)
Frame = +2
Query: 230 QVTLKRRSSAIKKXREIFKRAEQYVKEYRIXERDEIRL 343
++ + + ++K +EI++ YV+EYR + +E RL
Sbjct: 367 ELRILEQKKLLQKHKEIYEERMTYVQEYRAQKEEEQRL 404
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,127,864
Number of Sequences: 53049
Number of extensions: 342711
Number of successful extensions: 862
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 861
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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