Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N19
         (307 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_07_0070 + 27479654-27479672,27479864-27479922,27480339-274803...    61   1e-10
01_06_0260 - 27959188-27959251,27959342-27959424,27960220-279603...    61   1e-10
09_06_0303 - 22149214-22149474,22150099-22150236,22150856-221511...    27   3.8  
07_03_1696 - 28779455-28779733,28779813-28780074,28780805-287809...    26   5.1  

>05_07_0070 +
           27479654-27479672,27479864-27479922,27480339-27480378,
           27480477-27480565,27481065-27481147,27481219-27481282
          Length = 117

 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = +2

Query: 104 KMEVTQHAKYTCSFRGKDAMKRSCVGIWSCKRCKRTVPXXAWVFXXXXXXXXXXXVRRLR 283
           KMEV+QH+KY C F GK A+KR  VGIW CK C +     A+             +RRLR
Sbjct: 53  KMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLR 112

Query: 284 E 286
           E
Sbjct: 113 E 113



 Score = 45.6 bits (103), Expect = 8e-06
 Identities = 19/28 (67%), Positives = 22/28 (78%)
 Frame = +1

Query: 22  MAKRTKKVGITGKYGTRYXASLRKMVNQ 105
           + KRTKK GI GKYGTRY ASLRK + +
Sbjct: 26  LTKRTKKAGIVGKYGTRYGASLRKQIKK 53


>01_06_0260 -
           27959188-27959251,27959342-27959424,27960220-27960308,
           27960388-27960427,27960938-27960981,27961240-27961288
          Length = 122

 Score = 61.3 bits (142), Expect = 1e-10
 Identities = 28/61 (45%), Positives = 34/61 (55%)
 Frame = +2

Query: 104 KMEVTQHAKYTCSFRGKDAMKRSCVGIWSCKRCKRTVPXXAWVFXXXXXXXXXXXVRRLR 283
           KMEV+QH+KY C F GK A+KR  VGIW CK C +     A+             +RRLR
Sbjct: 58  KMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTMNTASAVTVRSTIRRLR 117

Query: 284 E 286
           E
Sbjct: 118 E 118



 Score = 44.8 bits (101), Expect = 1e-05
 Identities = 19/26 (73%), Positives = 21/26 (80%)
 Frame = +1

Query: 28  KRTKKVGITGKYGTRYXASLRKMVNQ 105
           KRTKK GI GKYGTRY ASLRK + +
Sbjct: 33  KRTKKAGIVGKYGTRYGASLRKQIKK 58


>09_06_0303 -
           22149214-22149474,22150099-22150236,22150856-22151100,
           22151344-22151809
          Length = 369

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +2

Query: 125 AKYTCSFRGKDAMKRSCVGIWSCKRCKRTVP 217
           AKYT    G  A  RS  G  SCK  ++ VP
Sbjct: 105 AKYTGGMPGSIADDRSSAGAVSCKLREKNVP 135


>07_03_1696 - 28779455-28779733,28779813-28780074,28780805-28780956,
            28781765-28781961,28782258-28782462,28782737-28782982,
            28783603-28783719,28784206-28784397,28784480-28784693,
            28784835-28784926,28784952-28785001,28785494-28785812,
            28785908-28786068,28786407-28786650,28787212-28787467,
            28787634-28787834,28788568-28788910,28789003-28789064,
            28789645-28789851,28790170-28790978
          Length = 1535

 Score = 26.2 bits (55), Expect = 5.1
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = +1

Query: 43   VGITGKYGTRYXASLRKMVNQDGSNPTRKVYLLISW 150
            + + G YGT+  A  R+++    ++   K+ +  SW
Sbjct: 1296 ISVQGSYGTKIEAVTRRILRITSTDGAAKILVFSSW 1331


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,913,611
Number of Sequences: 37544
Number of extensions: 141511
Number of successful extensions: 293
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 290
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 293
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 363831720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)