Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N19
         (307 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   0.84 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   1.5  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   1.5  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   1.5  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   2.0  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   2.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   2.6  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   4.5  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        20   7.9  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        20   7.9  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        20   7.9  

>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -2

Query: 147 RNEQVYFACWVTSILVDH 94
           +N+ +   CWVT I  DH
Sbjct: 48  KNQILTTNCWVTQIWTDH 65


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  GQTYQKGWNYWQIWHTL 74
           G+     W+Y+ I+HTL
Sbjct: 165 GKNITTPWDYYYIYHTL 181


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  GQTYQKGWNYWQIWHTL 74
           G+     W+Y+ I+HTL
Sbjct: 180 GKNITTPWDYYYIYHTL 196


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 24  GQTYQKGWNYWQIWHTL 74
           G+     W+Y+ I+HTL
Sbjct: 68  GKNITTPWDYYYIYHTL 84


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 83  EAX*RVPYLPVIPTFLV 33
           +A  R+P LP+IP + V
Sbjct: 780 QAIPRIPILPMIPVYCV 796


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = -1

Query: 199 SLTRPDADTRTFHSILTTK*ASILCVL 119
           + TRP   T TFH IL  K A+ L VL
Sbjct: 334 TFTRPCGITLTFHEIL--KRANTLFVL 358


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = +2

Query: 11  GLPXWPNVPKRLELLANMAHVTVPLYVKWSTK 106
           G+P  PN+P  +  +  M  +  P+  + S K
Sbjct: 428 GMPPLPNMPGSMPTMPTMPSMAGPIRRRISDK 459


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -2

Query: 246 AVVENTQAXXGTVLLHRLQDQM 181
           AVVE      G +++H  QD++
Sbjct: 111 AVVEGDLVLGGLMMVHERQDRL 132


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 39  KGWNYWQIW 65
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 39  KGWNYWQIW 65
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 19.8 bits (39), Expect = 7.9
 Identities = 5/9 (55%), Positives = 5/9 (55%)
 Frame = +3

Query: 39  KGWNYWQIW 65
           K WN W  W
Sbjct: 694 KSWNKWNDW 702


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,956
Number of Sequences: 438
Number of extensions: 1727
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)