Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N17
         (417 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    24   0.68 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   2.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   3.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.8 bits (49), Expect = 0.68
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
 Frame = +3

Query: 246 FPVKYLI---NCLFFINVYSKLFGANNL----LHIXSVLYVCTDFQCIFSYLPVCVCV 398
           +P+ +LI      F  NV + ++   N+    L + ++L V  +F C+ S + +C CV
Sbjct: 220 WPIAFLIFFATLDFLDNVDTIMYEKTNVTFVHLAVLNILRVGKNFVCLLSLIILCDCV 277


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
 Frame = +3

Query: 258 YLINCLFFINVYSKLFGAN--NLLHIXSVLYVCTD 356
           Y + CLF INV ++  G++    L + +VL +  D
Sbjct: 499 YRMTCLFCINVLAEACGSDITTRLLLPTVLSMAND 533


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 176 LRLFGGNXIYMCIIYGGKSQNEVVLSWFTLL 84
           LRL     +Y  +IY       ++ SW+ LL
Sbjct: 13  LRLIRDLSLYFSVIYSLLRVKRMMRSWYYLL 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,776
Number of Sequences: 336
Number of extensions: 1793
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)