Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N16
(473 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63; Eukary... 181 6e-45
UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105; Eukar... 154 1e-36
UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S riboso... 130 2e-29
UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365... 127 1e-28
UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S riboso... 121 9e-27
UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal ... 117 1e-25
UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative, ... 113 2e-24
UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S riboso... 100 2e-20
UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, who... 93 2e-18
UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=... 81 1e-14
UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein sim... 71 2e-11
UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1; Encepha... 68 1e-10
UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=... 66 5e-10
UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Re... 58 7e-08
UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellu... 55 9e-07
UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome sh... 53 3e-06
UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6; Archae... 47 2e-04
UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilu... 46 4e-04
UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2; Methan... 45 7e-04
UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S riboso... 44 0.002
UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2; Desulf... 43 0.004
UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus... 38 0.11
UniRef50_UPI00015531AB Cluster: PREDICTED: similar to OTTHUMP000... 38 0.15
UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2; Thermo... 38 0.15
UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8; Euryar... 37 0.26
UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5; Archae... 36 0.35
UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2; Archae... 36 0.60
UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2; Archae... 36 0.60
UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured... 35 0.80
UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=... 35 0.80
UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3; ... 33 3.2
UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5; Euryar... 33 3.2
UniRef50_A0QLA0 Cluster: Methyltransferase, putative, family pro... 31 9.8
UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula marismo... 31 9.8
>UniRef50_P17704 Cluster: 40S ribosomal protein S17; n=63;
Eukaryota|Rep: 40S ribosomal protein S17 - Drosophila
melanogaster (Fruit fly)
Length = 131
Score = 181 bits (441), Expect = 6e-45
Identities = 90/110 (81%), Positives = 95/110 (86%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDN 304
LTLDF TNKRICEE+AIIPTKPLRNKIAG+ THLM RLRHSQVRGISIKLQE ERERRDN
Sbjct: 24 LTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDN 83
Query: 305 YVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQPATQCGYGGRRN 454
YVP VSALE DIIEV DTK+MLK+LDF+NI GLQLTQP T GRRN
Sbjct: 84 YVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT--NNFGRRN 131
Score = 37.5 bits (83), Expect = 0.15
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 67 RTKTVKKAAXIIIEKYYTTINT*F 138
RTKTVKKAA +IIEKYYT + F
Sbjct: 5 RTKTVKKAAKVIIEKYYTRLTLDF 28
>UniRef50_P08708 Cluster: 40S ribosomal protein S17; n=105;
Eukaryota|Rep: 40S ribosomal protein S17 - Homo sapiens
(Human)
Length = 135
Score = 154 bits (373), Expect = 1e-36
Identities = 70/96 (72%), Positives = 84/96 (87%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
DF TNKR+CEEIAIIP+K LRNKIAG+ THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 27 DFHTNKRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVP 86
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEV PDTK+MLK+LDF +++ LQ+TQP
Sbjct: 87 EVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQP 122
Score = 37.9 bits (84), Expect = 0.11
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 67 RTKTVKKAAXIIIEKYYTTINT*F 138
RTKTVKKAA +IIEKYYT + F
Sbjct: 5 RTKTVKKAARVIIEKYYTRLGNDF 28
>UniRef50_UPI00001CC3BC Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Rattus norvegicus
Length = 190
Score = 130 bits (314), Expect = 2e-29
Identities = 61/96 (63%), Positives = 73/96 (76%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
DF TNK +CEEIAIIP++ LRNKI + THLM+R++ VRGISIKLQE ERERRDNYVP
Sbjct: 82 DFHTNKHVCEEIAIIPSENLRNKITSYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVP 141
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
SAL+ +IIEV PDTK ML + F ++ Q TQP
Sbjct: 142 EGSALDQEIIEVDPDTKKMLNLPGFGRLSNFQDTQP 177
>UniRef50_A6ND66 Cluster: Uncharacterized protein ENSP00000351365;
n=3; Homo/Pan/Gorilla group|Rep: Uncharacterized protein
ENSP00000351365 - Homo sapiens (Human)
Length = 135
Score = 127 bits (307), Expect = 1e-28
Identities = 59/102 (57%), Positives = 78/102 (76%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
DF TNK +CE IAII +K LRNKI G+ HLM+R+R VRGISIKLQE ERE RDNYVP
Sbjct: 28 DFYTNKCVCE-IAIILSKKLRNKIVGYVKHLMKRIRKGPVRGISIKLQEEERENRDNYVP 86
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQPATQCGY 439
+S L+ + +EV PDTK+ML++LDF +++ LQ+T+P + +
Sbjct: 87 EISVLDQETVEVDPDTKEMLELLDFVSLSNLQVTRPTVEINF 128
>UniRef50_UPI0000D9A419 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Macaca mulatta
Length = 189
Score = 121 bits (291), Expect = 9e-27
Identities = 56/96 (58%), Positives = 74/96 (77%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
+F +NKR CEE II +K L NKI G+ HLM+R++ VRGISIKLQE ERER+DNYVP
Sbjct: 81 NFCSNKRACEETTIILSKKLCNKIVGYVMHLMKRIQKDPVRGISIKLQEKERERKDNYVP 140
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
+SA + + IEV PDTK+M K+L+F +++ LQ+TQP
Sbjct: 141 EISATDQETIEVDPDTKEMRKVLNFVSLSNLQVTQP 176
>UniRef50_UPI0001552FEC Cluster: PREDICTED: similar to ribosomal
protein S17; n=8; Eutheria|Rep: PREDICTED: similar to
ribosomal protein S17 - Mus musculus
Length = 228
Score = 117 bits (282), Expect = 1e-25
Identities = 54/96 (56%), Positives = 75/96 (78%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
DF T+K +CEEI I+P+K L++KIAG+ THL ++++ VRGISIKLQ E ERR +Y+P
Sbjct: 64 DFYTDKHVCEEITIVPSKKLQSKIAGYVTHLTKQIQRGPVRGISIKLQ--EEERRADYIP 121
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
VSAL+ +I EV P TK+MLK+LD +++ LQ+TQP
Sbjct: 122 EVSALDQEITEVDPATKEMLKLLDLGSLSNLQVTQP 157
>UniRef50_Q7XEQ3 Cluster: 40S ribosomal protein S17-4, putative,
expressed; n=7; Eukaryota|Rep: 40S ribosomal protein
S17-4, putative, expressed - Oryza sativa subsp.
japonica (Rice)
Length = 141
Score = 113 bits (271), Expect = 2e-24
Identities = 54/105 (51%), Positives = 75/105 (71%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDN 304
+TLDF TNK++ EE++I+P+K LRNK+AGF THLMRR++ VRGIS+KLQE ERERR +
Sbjct: 24 MTLDFHTNKKVLEEVSILPSKRLRNKVAGFTTHLMRRIQRGPVRGISLKLQEEERERRMD 83
Query: 305 YVPXVSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQPATQCGY 439
+VP SALE + I V +T +ML L ++ G++ Q + Y
Sbjct: 84 FVPEKSALEVEEIRVDKETMEMLAALGMADLPGVERQQEVSAPTY 128
>UniRef50_UPI00005A5879 Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S17 - Canis familiaris
Length = 177
Score = 100 bits (239), Expect = 2e-20
Identities = 49/95 (51%), Positives = 69/95 (72%)
Frame = +2
Query: 137 FDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVPX 316
F TNKR+CE+IAI P+K LRN IAG+ HL +R++ V + ER +++ YVP
Sbjct: 77 FHTNKRVCEDIAISPSKKLRNGIAGYVAHLTKRIQQGPVA------RGGER-KKETYVPE 129
Query: 317 VSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
VSAL+ +IIEV PDT++MLK+LDF +++ LQ+TQP
Sbjct: 130 VSALDQEIIEVDPDTQEMLKLLDFGSLSNLQVTQP 164
>UniRef50_A0ED58 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_9,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 178
Score = 93.5 bits (222), Expect = 2e-18
Identities = 44/84 (52%), Positives = 61/84 (72%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDN 304
LT DF NK+I E+ +P+K LRNKIAGFATHL++R++ V+GIS+K+QE ERERR +
Sbjct: 64 LTSDFHFNKKILSEVGQVPSKKLRNKIAGFATHLLKRIQTGSVKGISLKIQEEERERRLD 123
Query: 305 YVPXVSALEHDIIEVXPDTKDMLK 376
YVP S+++ D + D K ML+
Sbjct: 124 YVPEKSSVDIDNLRGDQDVKRMLE 147
>UniRef50_Q4Q806 Cluster: 40S ribosomal protein S17, putative; n=6;
Trypanosomatidae|Rep: 40S ribosomal protein S17,
putative - Leishmania major
Length = 143
Score = 81.0 bits (191), Expect = 1e-14
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDN 304
L DF NKR+ ++ I +K L+NKIAG+ TH+M+RL VRGIS+KLQE ERERR +
Sbjct: 24 LNFDFYQNKRVIMDVTIAESKKLKNKIAGYTTHIMKRLARGPVRGISLKLQEEERERRMD 83
Query: 305 YVPXVSALEHDI---IEVXPDTKDMLKMLD 385
+ P S ++ I + V T ML+ L+
Sbjct: 84 HAPATSDVDKVIQSGVSVDKKTMQMLQRLE 113
Score = 32.3 bits (70), Expect = 5.6
Identities = 12/21 (57%), Positives = 18/21 (85%)
Frame = +1
Query: 67 RTKTVKKAAXIIIEKYYTTIN 129
RTKTVK+A+ ++EKYY+ +N
Sbjct: 5 RTKTVKRASRQVVEKYYSKLN 25
>UniRef50_A4D1Q6 Cluster: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)); n=2;
Eutheria|Rep: Similar to dJ753D5.2 (Novel protein
similar to RPS17 (40S ribosomal protein S17)) - Homo
sapiens (Human)
Length = 121
Score = 70.5 bits (165), Expect = 2e-11
Identities = 36/89 (40%), Positives = 54/89 (60%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNYVP 313
DF +K +C+EI I ++ L +KIAG+ THLM+ +R S + +S R R NYVP
Sbjct: 27 DFYMSKYVCKEITITSSRELCSKIAGYVTHLMKEIRGSDSQ-VSPSSCRRRRRDRSNYVP 85
Query: 314 XVSALEHDIIEVXPDTKDMLKMLDFNNIN 400
S L+ +I EV TK+MLK+ F +++
Sbjct: 86 EGSVLDQEITEVDAGTKEMLKLPGFGSVS 114
>UniRef50_Q8SSF9 Cluster: 40S RIBOSOMAL PROTEIN S17; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S17
- Encephalitozoon cuniculi
Length = 120
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/86 (36%), Positives = 52/86 (60%)
Frame = +2
Query: 119 QXLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERR 298
Q L FD N + +++A++ +K L+N+IAG+ T L +++ + IK E ERER+
Sbjct: 22 QRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERK 81
Query: 299 DNYVPXVSALEHDIIEVXPDTKDMLK 376
+N +P S L+ D +EV T +M+K
Sbjct: 82 ENVIPKESMLDVDCVEVDDVTMEMIK 107
>UniRef50_A7AM97 Cluster: 40S ribosomal protein S17, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S17, putative -
Babesia bovis
Length = 145
Score = 65.7 bits (153), Expect = 5e-10
Identities = 32/60 (53%), Positives = 41/60 (68%)
Frame = +2
Query: 212 FATHLMRRLRHSQVRGISIKLQEXERERRDNYVPXVSALEHDIIEVXPDTKDMLKMLDFN 391
F HLMRR++ VRGIS+KLQE ERERR ++VP S ++ +I+V DT DML L N
Sbjct: 66 FIIHLMRRIQKGPVRGISLKLQEEERERRMDFVPERSEVDVPLIQVDQDTADMLTFLKLN 125
>UniRef50_Q9AW27 Cluster: RpS17 protein; n=1; Guillardia theta|Rep:
RpS17 protein - Guillardia theta (Cryptomonas phi)
Length = 118
Score = 58.4 bits (135), Expect = 7e-08
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 2/94 (2%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGI--SIKLQEXERERR 298
LT+DF NK C+EIA+I +K LRNKIAG+ THL++ + + I +IK E
Sbjct: 24 LTIDFQENKFFCDEIALITSKSLRNKIAGYVTHLIKEFFKGKKKKIYTNIKFDINNIEIN 83
Query: 299 DNYVPXVSALEHDIIEVXPDTKDMLKMLDFNNIN 400
+ S E + V +TK M+K L F N N
Sbjct: 84 NKESEVFSNTELKLNLVDDETKQMIKKL-FPNKN 116
>UniRef50_P54026 Cluster: 30S ribosomal protein S17e; n=11; cellular
organisms|Rep: 30S ribosomal protein S17e -
Methanococcus jannaschii
Length = 62
Score = 54.8 bits (126), Expect = 9e-07
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
T DF+TNKR+ EE+A I TK LRN+IAG+ TH MR+L+
Sbjct: 25 TTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62
>UniRef50_Q4TBI5 Cluster: Chromosome 13 SCAF7124, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF7124, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 372
Score = 53.2 bits (122), Expect = 3e-06
Identities = 22/35 (62%), Positives = 31/35 (88%)
Frame = +2
Query: 317 VSALEHDIIEVXPDTKDMLKMLDFNNINGLQLTQP 421
VSAL+ ++IEV PDTK+MLK+LDF +++ LQ+TQP
Sbjct: 327 VSALDQELIEVDPDTKEMLKLLDFGSLSNLQVTQP 361
>UniRef50_Q8TUZ3 Cluster: 30S ribosomal protein S17e; n=6;
Archaea|Rep: 30S ribosomal protein S17e - Methanopyrus
kandleri
Length = 70
Score = 46.8 bits (106), Expect = 2e-04
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 119 QXLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRG 259
+ LT DF+ NK++ E +A TK LRN IAG+ THLMR + G
Sbjct: 22 EYLTTDFEHNKKVVEIVARPKTKKLRNMIAGYVTHLMRLKERQREEG 68
>UniRef50_A1RX28 Cluster: Ribosomal protein S17e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S17e - Thermofilum
pendens (strain Hrk 5)
Length = 95
Score = 46.0 bits (104), Expect = 4e-04
Identities = 25/61 (40%), Positives = 40/61 (65%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERERRDNY 307
T+DF+ NK+ EIA IP++ LRN+IAG+ T L+RR + + R +S++ QE + Y
Sbjct: 25 TVDFELNKKKLMEIADIPSRQLRNQIAGYITRLVRRKKLIEQR-LSMR-QEITMTDEEEY 82
Query: 308 V 310
+
Sbjct: 83 I 83
>UniRef50_O26894 Cluster: 30S ribosomal protein S17e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S17e -
Methanobacterium thermoautotrophicum
Length = 62
Score = 45.2 bits (102), Expect = 7e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
T DFDTNK++ EE + + TK LRNKIAG+ T ++
Sbjct: 25 TDDFDTNKKLVEEFSTVSTKHLRNKIAGYITRII 58
>UniRef50_UPI0000DD7D3B Cluster: PREDICTED: similar to 40S ribosomal
protein S17; n=1; Homo sapiens|Rep: PREDICTED: similar
to 40S ribosomal protein S17 - Homo sapiens
Length = 53
Score = 44.0 bits (99), Expect = 0.002
Identities = 19/30 (63%), Positives = 23/30 (76%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
+F NKR+C+EIAIIP+K LRNK AG H
Sbjct: 21 NFHRNKRVCKEIAIIPSKKLRNKKAGLLWH 50
>UniRef50_A2BK33 Cluster: 30S ribosomal protein S17e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S17e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 103
Score = 42.7 bits (96), Expect = 0.004
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEXERER 295
T DF+ NKRI ++ P+K LRN+IAG+ T L+R + + I+ Q E R
Sbjct: 25 TEDFEHNKRIVSQLIETPSKKLRNQIAGYVTRLIRLYKRTGELQYLIEQQHAEEFR 80
>UniRef50_A7DPB3 Cluster: Ribosomal protein S17e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S17e - Candidatus Nitrosopumilus maritimus SCM1
Length = 129
Score = 37.9 bits (84), Expect = 0.11
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFAT-HLMRRLRHSQVR---GISIKLQEXERERRD 301
DF NK+I E++I+ +K L+N+IAG+ T ++ + +R + + + K E E +
Sbjct: 22 DFADNKKILNEVSIVRSKGLKNEIAGYITNYIKKEIREEKAKKAQAEASKSLEQEAQVEP 81
Query: 302 NYVPXVSALEHDIIEVXPDTK 364
V E E P+T+
Sbjct: 82 EPVEATENTEAPAAEETPETE 102
>UniRef50_UPI00015531AB Cluster: PREDICTED: similar to
OTTHUMP00000016594; n=1; Mus musculus|Rep: PREDICTED:
similar to OTTHUMP00000016594 - Mus musculus
Length = 128
Score = 37.5 bits (83), Expect = 0.15
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +2
Query: 125 LTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRL-RHSQVRGISIKLQEXERERRD 301
L+ D K +C+EI I P+K L KIAGF LM+++ R+ +++ +S L ER +D
Sbjct: 41 LSNDLHNKKDLCKEIIIFPSKKL-YKIAGFVMRLMKQIQRNYKLQELSSSL-AAERISKD 98
Query: 302 NYVPXVSALEHDIIEVXP 355
V L+ +++ P
Sbjct: 99 IVCQNVGFLQINMLMSEP 116
>UniRef50_Q9YA67 Cluster: 30S ribosomal protein S17e; n=2;
Thermoprotei|Rep: 30S ribosomal protein S17e - Aeropyrum
pernix
Length = 74
Score = 37.5 bits (83), Expect = 0.15
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
T DF+ NKR+ ++ +K LRN+IAG+ THL+
Sbjct: 25 TGDFEHNKRVVSQLIEYRSKKLRNQIAGYITHLV 58
>UniRef50_Q8PXL8 Cluster: 30S ribosomal protein S17e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 64
Score = 36.7 bits (81), Expect = 0.26
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +2
Query: 119 QXLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLR 241
+ T DF+TNK + + I +K +RN++AG+ T + R++
Sbjct: 22 EVFTKDFETNKALVTKYTTIESKIIRNRVAGYVTRKVARMK 62
>UniRef50_O29351 Cluster: 30S ribosomal protein S17e; n=5;
Archaea|Rep: 30S ribosomal protein S17e - Archaeoglobus
fulgidus
Length = 65
Score = 36.3 bits (80), Expect = 0.35
Identities = 15/39 (38%), Positives = 25/39 (64%)
Frame = +2
Query: 119 QXLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRR 235
+ T +FD NKR+ E+ I +K +RN++AG+ T + R
Sbjct: 22 EVFTGNFDENKRLVAELTNIQSKTVRNRVAGYITRRVNR 60
>UniRef50_Q0W674 Cluster: 30s ribosomal protein S17E; n=2;
Archaea|Rep: 30s ribosomal protein S17E - Uncultured
methanogenic archaeon RC-I
Length = 65
Score = 35.5 bits (78), Expect = 0.60
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
DF NK E++A + TK +RN+IAG+ T M
Sbjct: 27 DFTANKAKVEQLASVQTKEVRNRIAGYVTRKM 58
>UniRef50_Q5V5R5 Cluster: 30S ribosomal protein S17e; n=2;
Archaea|Rep: 30S ribosomal protein S17e - Haloarcula
marismortui (Halobacterium marismortui)
Length = 63
Score = 35.5 bits (78), Expect = 0.60
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATHLM 229
DF+ NK + EE+ I +K +RN+IAG+ T M
Sbjct: 26 DFEHNKDVVEELTNIESKGVRNRIAGYVTRKM 57
>UniRef50_Q64BW7 Cluster: Ribosomal protein S17E; n=1; uncultured
archaeon GZfos26F9|Rep: Ribosomal protein S17E -
uncultured archaeon GZfos26F9
Length = 76
Score = 35.1 bits (77), Expect = 0.80
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 128 TLDFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
T DF+ NK++ ++ + +K +RN+IAG+ TH
Sbjct: 24 TDDFELNKKLVDKYTNVESKDVRNRIAGYITH 55
>UniRef50_A2SST9 Cluster: Ribosomal protein S17E-like protein; n=4;
Methanomicrobiales|Rep: Ribosomal protein S17E-like
protein - Methanocorpusculum labreanum (strain ATCC
43576 / DSM 4855 / Z)
Length = 64
Score = 35.1 bits (77), Expect = 0.80
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFAT 220
+FD NK++ EI I +K +RN++AG+ T
Sbjct: 26 NFDDNKKVVAEITTIESKMIRNRVAGYVT 54
>UniRef50_Q64D47 Cluster: Putative uncharacterized protein; n=3;
environmental samples|Rep: Putative uncharacterized
protein - uncultured archaeon GZfos19A5
Length = 122
Score = 33.1 bits (72), Expect = 3.2
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = -3
Query: 222 CVANPAILFLRGLVGMIAISSHILLFVSKSSVN 124
CV PAILFL L+ SS LF SKSSV+
Sbjct: 18 CVIYPAILFLTPLLSTFVYSSTNFLFSSKSSVH 50
>UniRef50_Q9HPX1 Cluster: 30S ribosomal protein S17e; n=5;
Euryarchaeota|Rep: 30S ribosomal protein S17e -
Halobacterium salinarium (Halobacterium halobium)
Length = 59
Score = 33.1 bits (72), Expect = 3.2
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = +2
Query: 134 DFDTNKRICEEIAIIPTKPLRNKIAGFATH 223
DF+ NK E+ I +K +RN+IAG+ TH
Sbjct: 27 DFEHNKDAVTELTNIESKNVRNRIAGYITH 56
>UniRef50_A0QLA0 Cluster: Methyltransferase, putative, family
protein; n=10; Mycobacterium|Rep: Methyltransferase,
putative, family protein - Mycobacterium avium (strain
104)
Length = 320
Score = 31.5 bits (68), Expect = 9.8
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 322 RHXWDIVVTPLTLLFLKFDRDSSHLRVSETP 230
RH WD+ VTP L ++DR H TP
Sbjct: 273 RHGWDVTVTPAPELMARYDRRPPHDIEDATP 303
>UniRef50_Q5V546 Cluster: Sensor protein; n=1; Haloarcula
marismortui|Rep: Sensor protein - Haloarcula marismortui
(Halobacterium marismortui)
Length = 450
Score = 31.5 bits (68), Expect = 9.8
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 295 PLTLLFLKFDRDSSHLRVSETP--H*MCGKSSNFIPKRLGRNDSD 167
P T+L F+R+S HL V +T + + SS P+ LGR D D
Sbjct: 127 PETILATMFERNSEHLYVKDTDRHYLLLNDSSYAPPELLGRRDED 171
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 413,697,618
Number of Sequences: 1657284
Number of extensions: 6921534
Number of successful extensions: 15865
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 15578
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15861
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26450695845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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