Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N16
         (473 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    22   2.5  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   4.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   4.4  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    21   4.4  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    21   4.4  

>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = +1

Query: 367 YVEDAGLQQY*WPATNTASYPVW 435
           YV+D+ ++   WP    A+  +W
Sbjct: 527 YVDDSSVESRVWPRAAAAAERLW 549


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = -3

Query: 168 ISSHILLFVSKSSVNXCIV 112
           I+S ILL +S+S V+ C++
Sbjct: 5   ITSIILLVLSESLVSGCLI 23


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 246 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 142
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 246 ECLRRLIKCVANPAILFLRGLVGMIAISSHILLFV 142
           +CL +L K  +    L L G     AI S IL+FV
Sbjct: 143 KCLYKLWKMPSLSEFLSLFGTETCPAIGSAILIFV 177


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 187 LGRNDSDFFTYSFICIKIKC*XLYSIFQ 104
           L ++ SD+F +SF         +YS+F+
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFR 75


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = -2

Query: 187 LGRNDSDFFTYSFICIKIKC*XLYSIFQ 104
           L ++ SD+F +SF         +YS+F+
Sbjct: 48  LKQHKSDYFYFSFYITSYTLLSVYSLFR 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,183
Number of Sequences: 336
Number of extensions: 1815
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11036865
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)