Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N14
         (439 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    22   2.2  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   2.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   3.9  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   3.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.8  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    20   9.0  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 9/27 (33%), Positives = 17/27 (62%)
 Frame = +2

Query: 164 AVTRLQQFLVTHREWWSALDAQRSFVN 244
           AVT +   L+ ++E WS+L+    F++
Sbjct: 31  AVTIILSSLIFNQEQWSSLNKNFQFID 57


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.8 bits (44), Expect = 2.9
 Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 2/83 (2%)
 Frame = +1

Query: 40  CNHACSQLICCILPLRSERRKHKLKRLVPHPNSYFMDVKC--PGCYKITTVFSHAQRVVV 213
           C +  +++I  IL L   R +    RL    N     V         I T+     R V+
Sbjct: 272 CQNVSTEVIGNILRLMHRRFEITALRLFTIDNKLLFGVLAYYSTTCDIATILDFWVRCVL 331

Query: 214 CAGCSTILCQPTGGRARLTEGCS 282
              C+ +     GG A +  GCS
Sbjct: 332 SLHCAAV-----GGSANIMSGCS 349


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 210 GLRWMLNDPLSTH 248
           G R+++ND LS H
Sbjct: 134 GFRYLVNDELSAH 146


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +3

Query: 210 GLRWMLNDPLSTH 248
           G R+++ND LS H
Sbjct: 448 GFRYLVNDELSAH 460


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = +1

Query: 61  LICCILPLRSERRKHKLKRLVP 126
           LI  I  L   ++ H+L++LVP
Sbjct: 12  LISKIFALLPVKKHHRLEKLVP 33


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 20.2 bits (40), Expect = 9.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 164 PGHLTSMK*ELGCGTS 117
           PG L SM   + CGTS
Sbjct: 216 PGSLGSMGVSVPCGTS 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,063
Number of Sequences: 336
Number of extensions: 1932
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9775509
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)