Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N10
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660           85   6e-17
01_06_0783 + 31975261-31975398,31975583-31975726                       84   8e-17
01_05_0324 - 20946774-20946935,20947301-20947780                       82   4e-16
02_04_0361 - 22359278-22359439,22362291-22362728                       78   5e-15
06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749     74   9e-14

>01_01_1086 + 8539821-8540024,8540132-8540237,8540635-8540660
          Length = 111

 Score = 84.6 bits (200), Expect = 6e-17
 Identities = 37/58 (63%), Positives = 44/58 (75%)
 Frame = +1

Query: 118 KAVIKNADMSEEMQQDAVDCATQALXKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNF 291
           K  +K+ADM EEM+Q+A D A  A  K  +EKDIA +IKKEFDK + PTWHCIVGRNF
Sbjct: 46  KIQLKSADMKEEMRQEAFDIARVAFEKHTMEKDIAEYIKKEFDKNHGPTWHCIVGRNF 103


>01_06_0783 + 31975261-31975398,31975583-31975726
          Length = 93

 Score = 84.2 bits (199), Expect = 8e-17
 Identities = 40/89 (44%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
 Frame = +1

Query: 106 MCDRKAVIKNADMSEEMQQDAVDCATQALXKFNIE--KDIAAFIKKEFDKKYNPTWHCIV 279
           M + KA++++ DM  +MQ  A+  A +AL +F++   + IAA IKKEFD  + P W C+V
Sbjct: 1   MLEGKAMVEDTDMPVKMQLQAMSAAYKALDRFDVLDCRSIAAHIKKEFDMIHGPGWQCVV 60

Query: 280 GRNFGSYVTHETRHFIYFYLGQVAILLFK 366
           G +FG Y TH    FIYF LG +  L+FK
Sbjct: 61  GASFGCYFTHSKGSFIYFKLGALRFLVFK 89


>01_05_0324 - 20946774-20946935,20947301-20947780
          Length = 213

 Score = 81.8 bits (193), Expect = 4e-16
 Identities = 39/81 (48%), Positives = 55/81 (67%), Gaps = 3/81 (3%)
 Frame = +1

Query: 136 ADMSEEMQQDAVDCATQA---LXKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVT 306
           ADMS  MQ  A  CA ++   L KF+  + +A  +KKEFDK Y PTWHCIVG ++GS+VT
Sbjct: 125 ADMSPFMQLHAFRCAKRSHDSLDKFS-SRQLAHDVKKEFDKVYGPTWHCIVGTSYGSFVT 183

Query: 307 HETRHFIYFYLGQVAILLFKS 369
           H    F+YF + ++ ++LFK+
Sbjct: 184 HARGCFLYFSMDKIIVMLFKT 204


>02_04_0361 - 22359278-22359439,22362291-22362728
          Length = 199

 Score = 78.2 bits (184), Expect = 5e-15
 Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
 Frame = +1

Query: 82  KQKQTQDKMCDRKAVIK--NADMSEEMQQDAVDCATQALXKFNI--EKDIAAFIKKEFDK 249
           K+K+ +    +RK  ++   ADM   MQ+ AV  A  A+        K +A  +KKEFD 
Sbjct: 91  KEKEMEKGKEERKVSVRVRAADMPLAMQRRAVRLAFDAVAAMPRLDSKRLALALKKEFDA 150

Query: 250 KYNPTWHCIVGRNFGSYVTHETRHFIYFYLGQVAILLFKS 369
            Y P WHCIVG  FGSYVTH    F+YF + +V +LLF++
Sbjct: 151 TYGPAWHCIVGTGFGSYVTHSVGGFLYFSVDKVYVLLFRT 190


>06_03_0116 + 16816970-16817209,16817328-16817461,16818716-16818749
          Length = 135

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 34/64 (53%), Positives = 43/64 (67%)
 Frame = +1

Query: 106 MCDRKAVIKNADMSEEMQQDAVDCATQALXKFNIEKDIAAFIKKEFDKKYNPTWHCIVGR 285
           +   K  IK+A+M EEM+Q+A D    A  K  +EKDI  +IK EFDK + PTWHCIVG 
Sbjct: 54  LAGHKIQIKSANMKEEMRQEAFDIDRVAFEKHTMEKDIVEYIK-EFDKNHGPTWHCIVGH 112

Query: 286 NFGS 297
           NFG+
Sbjct: 113 NFGT 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,089,042
Number of Sequences: 37544
Number of extensions: 308055
Number of successful extensions: 710
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 692
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 709
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)