Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N08
         (508 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058491-1|AAL13720.1|  182|Drosophila melanogaster GM14452p pro...    91   8e-19
AE014134-3177|AAS64725.1|  182|Drosophila melanogaster CG10664-P...    91   8e-19
AE014134-3176|AAF53857.1|  182|Drosophila melanogaster CG10664-P...    91   8e-19
AY084105-1|AAL89843.1|  176|Drosophila melanogaster AT07685p pro...    86   2e-17
AE013599-72|AAF57334.2|  176|Drosophila melanogaster CG10396-PA ...    86   2e-17
AE014298-1193|AAF46385.1|  679|Drosophila melanogaster CG33181-P...    30   2.1  
AE014297-1797|AAF55018.2|  401|Drosophila melanogaster CG14360-P...    29   3.6  
BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p pro...    29   4.8  

>AY058491-1|AAL13720.1|  182|Drosophila melanogaster GM14452p
           protein.
          Length = 182

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 237 LPSGSVRTPLH-IKALREKEKGDWRKLTLEXKKTLYRASFCQTFAEFQAPTGEWKGVVGW 413
           LP+   R P + I ALR KE+GDW+KL+ +  K LYRASFCQT AE QA +GEWK  +G 
Sbjct: 60  LPAVRFREPTNEINALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGV 119

Query: 414 ALVLSSLAAWIYMAMKVFVYSPIPDSLSE 500
           +L+  + A W+ + M +FVY  +P +  E
Sbjct: 120 SLLFCAAAIWVAVLMNIFVYDELPVTFDE 148



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +2

Query: 152 LAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDT 262
           L KIG RE VGYG+NG   Y DR D+PLPA+RFRE T
Sbjct: 33  LDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AE014134-3177|AAS64725.1|  182|Drosophila melanogaster CG10664-PB,
           isoform B protein.
          Length = 182

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 237 LPSGSVRTPLH-IKALREKEKGDWRKLTLEXKKTLYRASFCQTFAEFQAPTGEWKGVVGW 413
           LP+   R P + I ALR KE+GDW+KL+ +  K LYRASFCQT AE QA +GEWK  +G 
Sbjct: 60  LPAVRFREPTNEINALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGV 119

Query: 414 ALVLSSLAAWIYMAMKVFVYSPIPDSLSE 500
           +L+  + A W+ + M +FVY  +P +  E
Sbjct: 120 SLLFCAAAIWVAVLMNIFVYDELPVTFDE 148



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +2

Query: 152 LAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDT 262
           L KIG RE VGYG+NG   Y DR D+PLPA+RFRE T
Sbjct: 33  LDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AE014134-3176|AAF53857.1|  182|Drosophila melanogaster CG10664-PA,
           isoform A protein.
          Length = 182

 Score = 91.1 bits (216), Expect = 8e-19
 Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 1/89 (1%)
 Frame = +3

Query: 237 LPSGSVRTPLH-IKALREKEKGDWRKLTLEXKKTLYRASFCQTFAEFQAPTGEWKGVVGW 413
           LP+   R P + I ALR KE+GDW+KL+ +  K LYRASFCQT AE QA +GEWK  +G 
Sbjct: 60  LPAVRFREPTNEINALRAKEQGDWKKLSTQEIKALYRASFCQTIAEVQAGSGEWKLHLGV 119

Query: 414 ALVLSSLAAWIYMAMKVFVYSPIPDSLSE 500
           +L+  + A W+ + M +FVY  +P +  E
Sbjct: 120 SLLFCAAAIWVAVLMNIFVYDELPVTFDE 148



 Score = 56.0 bits (129), Expect = 3e-08
 Identities = 25/37 (67%), Positives = 28/37 (75%)
 Frame = +2

Query: 152 LAKIGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDT 262
           L KIG RE VGYG+NG   Y DR D+PLPA+RFRE T
Sbjct: 33  LDKIGKREIVGYGWNGTACYADRVDYPLPAVRFREPT 69


>AY084105-1|AAL89843.1|  176|Drosophila melanogaster AT07685p
           protein.
          Length = 176

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = +3

Query: 276 ALREKEKGDWRKLTLEXKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMA 455
           ALREKE  DW+KL+L+ KK LYR SFCQT+AEFQ  T EWK  +G AL L S+   I + 
Sbjct: 69  ALREKELDDWKKLSLDEKKQLYRYSFCQTYAEFQHITPEWKMCLGVALWLVSIGIAISIT 128

Query: 456 MKVFVYSPIPDSLSEXR 506
           MK  +Y  +PD+ ++ R
Sbjct: 129 MKTVLYGKLPDTFNDER 145



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +2

Query: 161 IGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTP 265
           + DR+ VG+G NG+P Y D PD P PAIR+RE +P
Sbjct: 31  VADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSP 65


>AE013599-72|AAF57334.2|  176|Drosophila melanogaster CG10396-PA
           protein.
          Length = 176

 Score = 86.2 bits (204), Expect = 2e-17
 Identities = 41/77 (53%), Positives = 53/77 (68%)
 Frame = +3

Query: 276 ALREKEKGDWRKLTLEXKKTLYRASFCQTFAEFQAPTGEWKGVVGWALVLSSLAAWIYMA 455
           ALREKE  DW+KL+L+ KK LYR SFCQT+AEFQ  T EWK  +G AL L S+   I + 
Sbjct: 69  ALREKELDDWKKLSLDEKKQLYRYSFCQTYAEFQHITPEWKMCLGVALWLVSIGIAISIT 128

Query: 456 MKVFVYSPIPDSLSEXR 506
           MK  +Y  +PD+ ++ R
Sbjct: 129 MKTVLYGKLPDTFNDER 145



 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = +2

Query: 161 IGDREWVGYGFNGQPNYVDRPDFPLPAIRFREDTP 265
           + DR+ VG+G NG+P Y D PD P PAIR+RE +P
Sbjct: 31  VADRQVVGHGINGRPIYFDSPDCPFPAIRYREVSP 65


>AE014298-1193|AAF46385.1|  679|Drosophila melanogaster CG33181-PA
           protein.
          Length = 679

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 18/42 (42%), Positives = 21/42 (50%)
 Frame = +3

Query: 135 PLETLNLPRLVTVSG*AMVSTASPTT*TGLTSPCLPSGSVRT 260
           P E  NLP     S  A   T +P T TG T+P  P+ S RT
Sbjct: 4   PNEQTNLPH--NPSQPASADTQTPATATGTTTPSTPTPSTRT 43


>AE014297-1797|AAF55018.2|  401|Drosophila melanogaster CG14360-PA
           protein.
          Length = 401

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +1

Query: 46  QLLPAKWPIILMRRALINAIRVPVCARAWIHWKH*TCQDW*P*VGRLWFQRPA 204
           Q++  +W    +  +++NA  VP C  A+++     C  W   +G  W   PA
Sbjct: 26  QMVHFQWRRNPVDNSMVNASMVPFCLSAFLNVLFFGCNGW-DIIGHFWLGHPA 77


>BT022122-1|AAY51517.1|  784|Drosophila melanogaster IP09065p
           protein.
          Length = 784

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -2

Query: 453 PCRSKQPKMRGLEPNQRLPSTLRWGPGTQRRSDRMKLCT 337
           P R KQ K+R ++P  +  S     PGT      +KL T
Sbjct: 286 PRRRKQSKLRAMQPGGKEQSESSPNPGTGGSKSNLKLAT 324


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,407,025
Number of Sequences: 53049
Number of extensions: 576469
Number of successful extensions: 1640
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1577
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)