Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N06
(652 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 347 6e-98
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 341 3e-96
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 233 8e-64
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 200 7e-54
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 34 0.001
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 3.4
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 4.5
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 347 bits (853), Expect = 6e-98
Identities = 166/174 (95%), Positives = 166/174 (95%)
Frame = +2
Query: 68 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 247
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 248 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 427
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 428 GEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFXEIKKEV 589
GEFE GISKNGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE RF EIKKEV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEV 174
Score = 29.1 bits (62), Expect = 0.039
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 612 GYNPXAVAFVPIS 650
GYNP AVAFVPIS
Sbjct: 182 GYNPAAVAFVPIS 194
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 341 bits (839), Expect = 3e-96
Identities = 163/174 (93%), Positives = 164/174 (94%)
Frame = +2
Query: 68 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVL 247
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 248 DKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 427
DKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 428 GEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFXEIKKEV 589
GEFE GISKNGQTREHALLAFTLGVKQLIV VNKMD T+PPYSE RF EIKKEV
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEV 174
Score = 24.6 bits (51), Expect = 0.84
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = +3
Query: 612 GYNPXAVAFVPIS 650
GYN +VAFVPIS
Sbjct: 182 GYNTASVAFVPIS 194
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 233 bits (571), Expect = 8e-64
Identities = 112/117 (95%), Positives = 112/117 (95%)
Frame = +2
Query: 239 WVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 418
WVLDKLKAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 419 AGTGEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFXEIKKEV 589
AGTGEFE GISKNGQTREHALLAFTLGVKQLIV VNKMDSTEPPYSE RF EIKKEV
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEV 117
Score = 29.1 bits (62), Expect = 0.039
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 612 GYNPXAVAFVPIS 650
GYNP AVAFVPIS
Sbjct: 125 GYNPAAVAFVPIS 137
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 200 bits (489), Expect = 7e-54
Identities = 96/101 (95%), Positives = 96/101 (95%)
Frame = +2
Query: 287 DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQT 466
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFE GISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 467 REHALLAFTLGVKQLIVXVNKMDSTEPPYSEPRFXEIKKEV 589
REHALLAFTLGVKQLIV VNKMDSTEPPYSE RF EIKKEV
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEV 101
Score = 29.1 bits (62), Expect = 0.039
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 612 GYNPXAVAFVPIS 650
GYNP AVAFVPIS
Sbjct: 109 GYNPAAVAFVPIS 121
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.3 bits (75), Expect = 0.001
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +2
Query: 326 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGVK 505
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 506 QLIVXVNKMD 535
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
Score = 25.4 bits (53), Expect = 0.48
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 80 KTHINIVVIGHVDSGKST 133
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 89 INIVVIGHVDSGKST 133
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.6
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 311 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 412
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 311 TXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 412
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 4.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -3
Query: 617 VANLLDVXXILPS*FXQIWAHCMVVQWNPFCLL 519
V++LL + LP IW+H V FC++
Sbjct: 97 VSDLLLLISGLPPEIYYIWSHFPYVFGEAFCII 129
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,561
Number of Sequences: 438
Number of extensions: 3002
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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