Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N04
(451 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 60 2e-10
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 50 1e-07
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 46 4e-06
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 46 4e-06
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 40 1e-04
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 37 0.001
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 37 0.002
SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyc... 35 0.005
SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces p... 35 0.005
SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces... 35 0.005
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.020
SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr 1|... 31 0.082
SPBC1773.09c |mug184||meiotically upregulated gene Mug184|Schizo... 30 0.14
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 30 0.19
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 27 1.8
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 26 2.3
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 26 2.3
SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr 3... 26 3.1
SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex lar... 25 7.1
SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces pom... 25 7.1
SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces pom... 25 7.1
SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomy... 24 9.4
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 60.1 bits (139), Expect = 2e-10
Identities = 24/43 (55%), Positives = 34/43 (79%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
KNPN G+KFK+IS+AYE+L++ +KR YD+ GE+ L+ GG G
Sbjct: 37 KNPNAGDKFKEISRAYEILADEEKRATYDRFGEEGLQGGGADG 79
Score = 25.4 bits (53), Expect = 4.1
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +3
Query: 177 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPAQEPK*G 302
MVKET Y++L V + E HP + P G
Sbjct: 1 MVKETKLYEVLNVDVTASQAELKKAYRKLALKYHPDKNPNAG 42
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 50.4 bits (115), Expect = 1e-07
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXG 381
KNPN +KFK+IS AYEVLS+P +R++YDQ G
Sbjct: 37 KNPNGEKKFKEISLAYEVLSDPQRRKLYDQYG 68
Score = 25.0 bits (52), Expect = 5.4
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +3
Query: 177 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPAQEP 293
MV +T YD L V+P + E HP + P
Sbjct: 1 MVADTKLYDCLEVRPEASEAELKKAYRKLALKYHPDKNP 39
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 45.6 bits (103), Expect = 4e-06
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
Frame = +1
Query: 286 KNP-NEG--EKFKQISQAYEVLSNPDKRRIYDQXGEQALK-EGGGSG 414
KNP NE EKF +I++A+EVLS+P++R+IYD GE+ L + GG G
Sbjct: 38 KNPGNEEAQEKFIEINKAHEVLSDPEQRKIYDAYGEEGLNGQPGGPG 84
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 45.6 bits (103), Expect = 4e-06
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSGW 417
EKF+ I AYEVLS+P K+ IYD GEQ LK G+
Sbjct: 50 EKFQIIQHAYEVLSDPSKKEIYDNFGEQGLKTDWNVGF 87
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 40.3 bits (90), Expect = 1e-04
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Frame = +1
Query: 289 NPNEG--EKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
NP++ +KF +I QAYEVL +P K++ +D G A K G +G
Sbjct: 118 NPDKAAQDKFVEIKQAYEVLQDPKKKKAFDTYGAGAFKNGEFTG 161
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 37.1 bits (82), Expect = 0.001
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 5/45 (11%)
Frame = +1
Query: 286 KNPNE----GEKFKQISQAYEVLSNPDKRRIYDQXG-EQALKEGG 405
KNP++ EKF++IS+AY+VL + R YDQ G E+A+ E G
Sbjct: 39 KNPDDPQGASEKFQKISEAYQVLGDEKLRSQYDQFGKEKAVPEQG 83
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/36 (27%), Positives = 16/36 (44%)
Frame = +3
Query: 186 ETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPAQEP 293
+T YYD+LG+ + T + HP + P
Sbjct: 6 DTEYYDLLGISTDATAVDIKKAYRKLAVKYHPDKNP 41
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 36.7 bits (81), Expect = 0.002
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 280 LHKNPNEGEKFKQISQAYEVLSNPDKRRIYDQXG 381
+H+ E+F+ + +AY++L +P+ R +YD G
Sbjct: 40 IHEKEEAAERFRGVQEAYDILKDPESREMYDMYG 73
>SPBC1778.01c |zuo1|mpp11, SPBC30D10.01|zuotin |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 442
Score = 35.1 bits (77), Expect = 0.005
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 289 NPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQA 390
N N+ FK I +AYE+LS+P +RR +D E A
Sbjct: 137 NINDDSFFKCIQKAYEILSDPVRRRQFDSVDENA 170
>SPBC3E7.11c |||DNAJ protein Caj1/Djp1-type|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 35.1 bits (77), Expect = 0.005
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Frame = +1
Query: 286 KNPNEG-EKFKQISQAYEVLSNPDKRRIYDQXGE 384
+NP EKF+++++AY+VLS+P R YD+ G+
Sbjct: 43 ENPEAAREKFQKLAEAYQVLSDPKLREKYDKLGK 76
>SPBC17A3.05c |||DNAJ/DUF1977 DNAJB12 homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 403
Score = 35.1 bits (77), Expect = 0.005
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +1
Query: 292 PNEGEKFKQISQAYEVLSNPDKRRIYDQXG 381
P+ E FK +S+A++VLS+P+ R YD+ G
Sbjct: 148 PSADEAFKMVSKAFQVLSDPNLRAHYDRTG 177
Score = 24.6 bits (51), Expect = 7.1
Identities = 14/38 (36%), Positives = 16/38 (42%)
Frame = +3
Query: 168 IIKMVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHP 281
IIK K YY+IL +K CT E HP
Sbjct: 106 IIKY-KNHQYYEILDLKKTCTDTEIKKSYKKLALQLHP 142
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 33.1 bits (72), Expect = 0.020
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
+FK++ +AY +LS+P+ RR +D + GG+G
Sbjct: 390 RFKEVGEAYTILSDPESRRRFDSGVDLEPGMEGGAG 425
>SPAC4A8.06c |||esterase/lipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 578
Score = 31.1 bits (67), Expect = 0.082
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRR-IYDQXGEQALKEGGGSGWWI 423
KFK SQ + S D I + G + +K+ GGS WW+
Sbjct: 75 KFKFTSQPIDSKSESDSASYIRNYLGPEGIKQFGGSNWWL 114
>SPBC1773.09c |mug184||meiotically upregulated gene
Mug184|Schizosaccharomyces pombe|chr 2|||Manual
Length = 551
Score = 30.3 bits (65), Expect = 0.14
Identities = 15/34 (44%), Positives = 23/34 (67%), Gaps = 4/34 (11%)
Frame = +1
Query: 286 KNPNEGEK----FKQISQAYEVLSNPDKRRIYDQ 375
+NP + E+ F+++ A+EVLS+ KR IYDQ
Sbjct: 43 RNPGDEERAVKRFQRLQLAHEVLSDATKRLIYDQ 76
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.19
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQ 375
E F QI+ AY +LSN DKR+ +++
Sbjct: 49 EIFSQINAAYNILSNDDKRKWHEK 72
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 26.6 bits (56), Expect = 1.8
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRRIYDQ 375
+F+ I +A+EVL +P R ++DQ
Sbjct: 54 QFQLIQKAHEVLKDPKLRELFDQ 76
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 26.2 bits (55), Expect = 2.3
Identities = 13/32 (40%), Positives = 17/32 (53%), Gaps = 3/32 (9%)
Frame = +1
Query: 286 KNPNE---GEKFKQISQAYEVLSNPDKRRIYD 372
KNPN+ EKF + AY L + R+ YD
Sbjct: 40 KNPNDPKAAEKFHMLQLAYNALIDVQLRKAYD 71
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 26.2 bits (55), Expect = 2.3
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRRIYDQXGE 384
+F +++ AY VLS+ +R+ YD+ G+
Sbjct: 75 EFDKVAIAYGVLSDKKRRKHYDKTGQ 100
>SPCC63.13 |||DNAJ domain protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 208
Score = 25.8 bits (54), Expect = 3.1
Identities = 10/24 (41%), Positives = 18/24 (75%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQ 375
E+F+ +++AY VLS+ +R YD+
Sbjct: 46 EQFQLVNEAYYVLSDNSRRAQYDR 69
>SPBC4C3.05c |nuc1|rpa1|DNA-directed RNA polymerase I complex large
subunit Nuc1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1689
Score = 24.6 bits (51), Expect = 7.1
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +1
Query: 271 NTTLHKNPNEGEKFKQISQAYEVLSN 348
++T+ NP+E E ++ S+A+E+L N
Sbjct: 407 DSTVEVNPDEKEGLERRSRAFELLIN 432
>SPAC2E1P5.03 |||DNAJ domain protein Erj5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 303
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/44 (25%), Positives = 19/44 (43%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSGW 417
KNP E + + +L N + R+ YD + G+G+
Sbjct: 71 KNPKSKELYTLLGLIVNILRNTETRKRYDYFLKNGFPRWKGTGY 114
>SPBC30D10.16 |pha2||phrenate dehydratase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 287
Score = 24.6 bits (51), Expect = 7.1
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -2
Query: 225 NLVSRPKCHNMWSP*PFLLCLSM 157
NLV RP C W+ F+ CL M
Sbjct: 237 NLVVRPSCKFPWTYIYFVECLGM 259
>SPCC550.02c |cwf5|ecm2|RNA-binding protein Cwf5|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 354
Score = 24.2 bits (50), Expect = 9.4
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 334 EVLSNPDKRRIYDQXGEQALKEGGGSGWWIXSPMDLF 444
E+ S P KR++ D +Q LKE S + + LF
Sbjct: 151 ELHSRPPKRKLDDVESKQILKEARASDASLNAERPLF 187
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,753,641
Number of Sequences: 5004
Number of extensions: 32203
Number of successful extensions: 94
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 94
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 166231220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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