Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N04
(451 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical pr... 77 6e-15
AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain (... 61 4e-10
Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical pr... 53 8e-08
Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical pr... 47 6e-06
U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain (p... 47 6e-06
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 43 1e-04
Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical p... 40 8e-04
L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain (pr... 39 0.002
L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain (pr... 39 0.002
Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical pr... 35 0.024
Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical pr... 33 0.096
AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain (... 32 0.17
Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical p... 31 0.29
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 31 0.29
Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical pr... 31 0.39
U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain (pr... 31 0.51
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 31 0.51
U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain (pr... 29 1.2
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 29 1.2
U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain (pr... 28 2.7
AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a prote... 27 6.3
Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical pr... 27 8.3
U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical pr... 27 8.3
AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis p... 27 8.3
AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical ... 27 8.3
AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical ... 27 8.3
AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever sho... 27 8.3
AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever sho... 27 8.3
>Z92834-5|CAB07390.1| 402|Caenorhabditis elegans Hypothetical
protein F39B2.10 protein.
Length = 402
Score = 77.0 bits (181), Expect = 6e-15
Identities = 35/55 (63%), Positives = 43/55 (78%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSGWWIXSPMDLFDM 450
KNP+ E+FKQISQAYEVLS+ KR+IYDQ GE+AL+ GGG G +P D+FDM
Sbjct: 37 KNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEEALQGGGGGGEGFHNPFDVFDM 91
Score = 39.1 bits (87), Expect = 0.001
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 177 MVKETTYYDILGVKPNCTTDEXXXXXXXXXXXXHPAQEP 293
MVKET YYD+LGVKP+ + +E HP + P
Sbjct: 1 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNP 39
>AF016428-7|AAB65361.1| 439|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 19 protein.
Length = 439
Score = 60.9 bits (141), Expect = 4e-10
Identities = 28/53 (52%), Positives = 37/53 (69%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSGWWIXSPMDLF 444
KNP+ G+KFK+IS AYEVLS+P+KRR+YD G + ++ GG G P LF
Sbjct: 44 KNPDHGDKFKEISFAYEVLSSPEKRRLYDARGLEGVQGGGAGGGGGGFPGGLF 96
>Z66513-5|CAA91334.1| 331|Caenorhabditis elegans Hypothetical
protein F54D5.8 protein.
Length = 331
Score = 53.2 bits (122), Expect = 8e-08
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 3/46 (6%)
Frame = +1
Query: 286 KNPNEG--EKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGG-GSG 414
KN G KFK+I++AY+VLS+ K++IYDQ GE+ LKEGG G+G
Sbjct: 35 KNKEAGAENKFKEIAEAYDVLSDDKKKKIYDQFGEEGLKEGGPGAG 80
>Z47356-7|CAD31695.1| 249|Caenorhabditis elegans Hypothetical
protein T15H9.7 protein.
Length = 249
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSGWWIXSPMDLF 444
EKF+ +S AYEVLS+ +KR +YD+ GE+ + + GG G P F
Sbjct: 64 EKFQDLSSAYEVLSDKEKRAMYDRHGEEGVAKMGGGGGGGHDPFSSF 110
>U40415-10|AAK39254.1| 215|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 14 protein.
Length = 215
Score = 47.2 bits (107), Expect = 6e-06
Identities = 21/39 (53%), Positives = 28/39 (71%)
Frame = +1
Query: 280 LHKNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALK 396
L +P + E FK+I+ A VLSNP+KRR+YD+ GE LK
Sbjct: 71 LDGDPEKTEMFKEINYANAVLSNPNKRRVYDEMGETGLK 109
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 42.7 bits (96), Expect = 1e-04
Identities = 19/45 (42%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Frame = +1
Query: 289 NPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEG--GGSGW 417
+PN ++F +I++AYEVL + + R+ YDQ GE+ L++G GG+ +
Sbjct: 55 DPNAHDEFVKINKAYEVLKDENLRKKYDQFGEKGLEDGFQGGNNY 99
>Z36238-2|CAA85274.1| 378|Caenorhabditis elegans Hypothetical
protein R74.4 protein.
Length = 378
Score = 40.3 bits (90), Expect = 6e-04
Identities = 19/35 (54%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
Frame = +1
Query: 286 KNPNEG---EKFKQISQAYEVLSNPDKRRIYDQXG 381
+NPN+ E+FK++S AY VLS+P+KRR YD G
Sbjct: 48 RNPNDAHAQEEFKKVSIAYSVLSDPNKRRQYDVSG 82
>Z73102-15|CAA97416.1| 401|Caenorhabditis elegans Hypothetical
protein B0035.14 protein.
Length = 401
Score = 39.9 bits (89), Expect = 8e-04
Identities = 18/33 (54%), Positives = 22/33 (66%)
Frame = +1
Query: 292 PNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQA 390
P+ E FK + AY VLS+ DKRR YDQ G +A
Sbjct: 172 PHATEAFKALGNAYAVLSDTDKRRQYDQYGAEA 204
>L12018-4|AAK68342.1| 456|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform a
protein.
Length = 456
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 280 LHKNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
++K KF++IS+AYEVLS+ KR+ YD G GG G
Sbjct: 75 VNKTKEAQTKFQEISEAYEVLSDDTKRQEYDAYGSGGGPAGGRGG 119
>L12018-3|AAK68343.1| 446|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 10, isoform b
protein.
Length = 446
Score = 38.7 bits (86), Expect = 0.002
Identities = 19/45 (42%), Positives = 26/45 (57%)
Frame = +1
Query: 280 LHKNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
++K KF++IS+AYEVLS+ KR+ YD G GG G
Sbjct: 75 VNKTKEAQTKFQEISEAYEVLSDDTKRQEYDAYGSGGGPAGGRGG 119
>Z35663-8|CAA84728.1| 249|Caenorhabditis elegans Hypothetical
protein T04A8.9 protein.
Length = 249
Score = 35.1 bits (77), Expect = 0.024
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYD 372
+KF Q++ AYE+LS+ DKR+ YD
Sbjct: 65 KKFHQVAMAYEILSSEDKRKAYD 87
>Z54216-2|CAA90945.1| 242|Caenorhabditis elegans Hypothetical
protein T24H10.3 protein.
Length = 242
Score = 34.7 bits (76), Expect = 0.031
Identities = 12/25 (48%), Positives = 22/25 (88%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRRIYDQXG 381
KF+ +++AY++LS+ +KR+IYD+ G
Sbjct: 59 KFQLLNKAYQILSDEEKRKIYDETG 83
>Z81113-2|CAB03279.1| 510|Caenorhabditis elegans Hypothetical
protein T03F6.2 protein.
Length = 510
Score = 33.1 bits (72), Expect = 0.096
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = +1
Query: 286 KNPNEGEK----FKQISQAYEVLSNPDKRRIYDQXGEQALK 396
KNP+ E+ F+ + AY+VLS+P +R YD+ E LK
Sbjct: 59 KNPDRIEECTQQFRLLQAAYDVLSDPREREFYDRHRESILK 99
>AC024811-1|AAF60776.1| 494|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 28 protein.
Length = 494
Score = 32.3 bits (70), Expect = 0.17
Identities = 17/37 (45%), Positives = 22/37 (59%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQXGEQALKEGGGSG 414
+KF I+ A EVLSN +KRR +D G+ L G G
Sbjct: 423 KKFIDIAAAKEVLSNEEKRRAFDN-GQDPLDSEAGRG 458
>Z70284-16|CAE17884.1| 155|Caenorhabditis elegans Hypothetical
protein K07F5.16 protein.
Length = 155
Score = 31.5 bits (68), Expect = 0.29
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 289 NPNEGEKFKQISQAYEVLSNPDKRRIYD 372
N N EKF ++ AY +L++ +R+ YD
Sbjct: 51 NTNSTEKFMELQNAYSILTSDSRRKTYD 78
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 31.5 bits (68), Expect = 0.29
Identities = 12/25 (48%), Positives = 20/25 (80%)
Frame = +1
Query: 307 KFKQISQAYEVLSNPDKRRIYDQXG 381
+F +I++AYEVLS+P ++ YD+ G
Sbjct: 62 RFMEIAEAYEVLSDPLRKERYDRFG 86
>Z81030-9|CAB02713.1| 191|Caenorhabditis elegans Hypothetical
protein C01G10.12 protein.
Length = 191
Score = 31.1 bits (67), Expect = 0.39
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +1
Query: 295 NEGEKFKQISQAYEVLSNPDKRRIYD 372
+E E+F + +AY+VL N +KR+ YD
Sbjct: 67 SETEQFMLVKEAYDVLRNEEKRKEYD 92
>U80451-1|AAB37835.1| 591|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 9 protein.
Length = 591
Score = 30.7 bits (66), Expect = 0.51
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +1
Query: 310 FKQISQAYEVLSNPDKRRIYDQXGEQALKEGG 405
F ++ +A+EVL +P +R IYD G Q L G
Sbjct: 71 FVKLRRAHEVLLDPKQRAIYDALGVQGLDTQG 102
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 30.7 bits (66), Expect = 0.51
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +1
Query: 286 KNPNEGE-KFKQISQAYEVLSNPDKRRIYDQ 375
K+ E E KFK+I+QAYE+L++ KR D+
Sbjct: 43 KSKEEAEQKFKKIAQAYEILTDKKKRADLDR 73
>U88181-2|AAB42303.1| 491|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 7 protein.
Length = 491
Score = 29.5 bits (63), Expect = 1.2
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Frame = +1
Query: 304 EKFKQISQAYEVLSNPDKRRIYDQXGE----QALKEGGG 408
+KF I+ A EVL + +KRR +DQ + +A ++GGG
Sbjct: 422 KKFIDIAAAKEVLQDEEKRRQFDQGVDPLDPEAQRQGGG 460
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 29.5 bits (63), Expect = 1.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSNPDKRRIYDQXGEQALKE 399
K+P+ E K ++ A+ +L +P KRR YD + E
Sbjct: 60 KHPSATEASKVVNNAFSLLMDPAKRRQYDLQNAETSNE 97
>U80439-4|AAB37641.2| 274|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 4 protein.
Length = 274
Score = 28.3 bits (60), Expect = 2.7
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 310 FKQISQAYEVLSNPDKRRIYDQXGEQALKEGGG 408
F ++ AY+VL P RR+YD L+ GGG
Sbjct: 69 FLELKNAYDVLRRPADRRLYD----YQLRGGGG 97
>AC199172-2|ABO33275.1| 305|Caenorhabditis elegans F-box a protein
protein 32 protein.
Length = 305
Score = 27.1 bits (57), Expect = 6.3
Identities = 9/12 (75%), Positives = 10/12 (83%)
Frame = +1
Query: 124 FNFVICAFNCEH 159
FNF IC+F CEH
Sbjct: 196 FNFWICSFECEH 207
>Z75536-4|CAA99832.3| 2271|Caenorhabditis elegans Hypothetical protein
F18C12.2b protein.
Length = 2271
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSN 348
KNP E F++I+ AYE+LS+
Sbjct: 1356 KNPEGREMFERINAAYELLSS 1376
>Z75536-3|CAA99831.3| 2279|Caenorhabditis elegans Hypothetical protein
F18C12.2a protein.
Length = 2279
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSN 348
KNP E F++I+ AYE+LS+
Sbjct: 1356 KNPEGREMFERINAAYELLSS 1376
>U97550-3|AAK18981.2| 423|Caenorhabditis elegans Hypothetical
protein T20F7.6 protein.
Length = 423
Score = 26.6 bits (56), Expect = 8.3
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +1
Query: 280 LHKNPNEGEKFKQ---ISQAYEVLSNPDKRRIYDQ 375
L K PN+ E F + I+Q YE + + K ++DQ
Sbjct: 30 LPKTPNDKEAFARLLWINQCYEAMPSSSKMVVFDQ 64
>AF372457-1|AAK54248.1| 2279|Caenorhabditis elegans endocytosis
protein RME-8 protein.
Length = 2279
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +1
Query: 286 KNPNEGEKFKQISQAYEVLSN 348
KNP E F++I+ AYE+LS+
Sbjct: 1356 KNPEGREMFERINAAYELLSS 1376
>AF016688-9|AAN65322.1| 816|Caenorhabditis elegans Hypothetical
protein F18A12.8b protein.
Length = 816
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 367 YDQXGEQALKEGGGSGWWIXSPMDLFD 447
+D G Q K+G WW S ++ FD
Sbjct: 688 FDDQGSQYDKDGNLHNWWSESSLNSFD 714
>AF016688-8|AAB66079.2| 848|Caenorhabditis elegans Hypothetical
protein F18A12.8a protein.
Length = 848
Score = 26.6 bits (56), Expect = 8.3
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 367 YDQXGEQALKEGGGSGWWIXSPMDLFD 447
+D G Q K+G WW S ++ FD
Sbjct: 688 FDDQGSQYDKDGNLHNWWSESSLNSFD 714
>AC024813-2|ABE73329.1| 1027|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform c protein.
Length = 1027
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 295 NEGEKFKQISQAYEVLSNPDKRR 363
NEG++ ++IS+ E LS P K+R
Sbjct: 327 NEGKQIREISEKIEKLSAPVKKR 349
>AC024813-1|AAK27880.3| 1241|Caenorhabditis elegans Est (ever
shorter telomeres) homologprotein 1, isoform a protein.
Length = 1241
Score = 26.6 bits (56), Expect = 8.3
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +1
Query: 295 NEGEKFKQISQAYEVLSNPDKRR 363
NEG++ ++IS+ E LS P K+R
Sbjct: 484 NEGKQIREISEKIEKLSAPVKKR 506
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,794,381
Number of Sequences: 27780
Number of extensions: 183814
Number of successful extensions: 434
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 416
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 434
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 788595652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -