Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_N01
(583 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 204 1e-51
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 182 7e-45
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 170 2e-41
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 154 1e-36
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 144 1e-33
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 130 2e-29
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 129 5e-29
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 122 8e-27
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 117 2e-25
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 109 5e-23
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 91 2e-17
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 88 1e-16
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 84 2e-15
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 80 3e-14
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 78 2e-13
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 76 7e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 67 3e-10
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 54 2e-06
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 54 2e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 54 3e-06
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 50 5e-05
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 49 7e-05
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 49 9e-05
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 46 9e-04
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 43 0.005
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 42 0.008
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 42 0.008
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 42 0.008
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 42 0.008
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 37 0.40
UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;... 36 0.92
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 36 0.92
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 36 0.92
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 2.1
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 33 4.9
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 33 6.5
UniRef50_Q08NP8 Cluster: Putative uncharacterized protein; n=1; ... 32 8.6
UniRef50_A2F388 Cluster: C2 domain containing protein; n=1; Tric... 32 8.6
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 204 bits (498), Expect = 1e-51
Identities = 96/130 (73%), Positives = 113/130 (86%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55 TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
MVKKWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYA H+Q++ IR KM I
Sbjct: 115 SMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174
Query: 536 ITRDVTNSEL 565
I R++T+++L
Sbjct: 175 IKREITSTDL 184
Score = 40.7 bits (91), Expect = 0.025
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAP 119
+VDPFTRKDWYDVKAP
Sbjct: 21 VVDPFTRKDWYDVKAP 36
Score = 33.1 bits (72), Expect = 4.9
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +1
Query: 121 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 213
+MF RQVG TLVNRTQ + ++G+ F
Sbjct: 37 NMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 182 bits (442), Expect = 7e-45
Identities = 92/139 (66%), Positives = 107/139 (76%)
Frame = +2
Query: 155 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMD 334
L T TKIAS+GLKGRVFEVSLADLQ D E +FRKF LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 335 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAI 514
LT DK+ MVKKWQT+IEA++DV TTDGY+LR+FC+GFT K + RKT YA H QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 515 RKKMCEIITRDVTNSELXE 571
RKKM EI+TR+V ++L E
Sbjct: 165 RKKMMEIMTREVQTNDLKE 183
Score = 37.9 bits (84), Expect = 0.17
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAP 119
+VDPF++KDWYDVKAP
Sbjct: 21 VVDPFSKKDWYDVKAP 36
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 170 bits (413), Expect = 2e-41
Identities = 85/132 (64%), Positives = 101/132 (76%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
TKIASEGLK RVFE+SLADLQAD D +++RK L AE VQGRNVL NF GMD TTDKLR
Sbjct: 449 TKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLR 506
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
+V+KWQTLIEA++DV TTD Y LR+FCI FT K +KTCYA +Q+R IR+KM EI
Sbjct: 507 SLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREI 566
Query: 536 ITRDVTNSELXE 571
+T T+ +L E
Sbjct: 567 MTNMATSCDLKE 578
Score = 34.3 bits (75), Expect = 2.1
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 78 DPFTRKDWYDVKAP 119
DPF +KDWYD+KAP
Sbjct: 417 DPFAKKDWYDIKAP 430
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 154 bits (374), Expect = 1e-36
Identities = 76/130 (58%), Positives = 99/130 (76%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
TK+AS+GLKGRV+EVSLAD++ D + FRK L AE V+GRNVL NF+GMDLT+DKLR
Sbjct: 53 TKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLR 110
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
++ KW TLIE +DV TTDGY LRVF I FT K ++KT YA ++V+AIRKKM +I
Sbjct: 111 SLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDI 170
Query: 536 ITRDVTNSEL 565
+T V++++L
Sbjct: 171 LTETVSSNDL 180
Score = 33.1 bits (72), Expect = 4.9
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +3
Query: 75 VDPFTRKDWYDVKAP 119
VDPFTRK+WY V+AP
Sbjct: 16 VDPFTRKEWYVVRAP 30
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 144 bits (350), Expect = 1e-33
Identities = 71/131 (54%), Positives = 93/131 (70%)
Frame = +2
Query: 179 KIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRW 358
K A++ LKGR+FEVSLADLQ D D +FRK L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 359 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEII 538
+V+KWQ+LIEAN+ V TTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 539 TRDVTNSELXE 571
R+ + L +
Sbjct: 173 QREASTCTLQQ 183
Score = 32.7 bits (71), Expect = 6.5
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 78 DPFTRKDWYDVKAP 119
DPF RKDWY +KAP
Sbjct: 22 DPFARKDWYGIKAP 35
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 130 bits (315), Expect = 2e-29
Identities = 67/132 (50%), Positives = 90/132 (68%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
T+IASE LKGRV EV+LADL + KF E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
+VKKW TLIE ++DV TTDG+++R+FCIGFT++ S +KT YA Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 536 ITRDVTNSELXE 571
IT++ + EL +
Sbjct: 174 ITKEAASRELTQ 185
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 129 bits (311), Expect = 5e-29
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 3/142 (2%)
Frame = +2
Query: 155 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMD 334
L T +IASE +KGRV E +LADL+ D ++++RK L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 335 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSL---SQRKTCYAXHTQV 505
+T D+L M++KWQTLIEA +D T DGY++RVF + FT K S S TCYA +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 506 RAIRKKMCEIITRDVTNSELXE 571
RAIR+K+ IT + + E
Sbjct: 168 RAIRRKINTFITNEAAKLGIAE 189
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 122 bits (293), Expect = 8e-27
Identities = 58/132 (43%), Positives = 87/132 (65%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
T +A+E +KGRV E SLADLQ +D + ++RK LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
M+KK QTLIE ++ + DGY+LR+F I FT QRKT YA +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 536 ITRDVTNSELXE 571
+ ++V+ + +
Sbjct: 171 VLKEVSKKSITQ 182
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 117 bits (282), Expect = 2e-25
Identities = 51/132 (38%), Positives = 84/132 (63%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
T+IA++ L+GRVFE +LADL E ++RK + VQGRN+L FH M++TTDK+
Sbjct: 55 TRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMA 114
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
+++KW T +E ++V T DGY +R+F + FT + Q + CYA V+ +R ++ ++
Sbjct: 115 NLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKM 174
Query: 536 ITRDVTNSELXE 571
I R ++ ++ E
Sbjct: 175 IKRRLSKVQIKE 186
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 109 bits (262), Expect = 5e-23
Identities = 53/101 (52%), Positives = 68/101 (67%)
Frame = +2
Query: 263 FRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCI 442
FRKF L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DV TTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 443 GFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDVTNSEL 565
FT K Q+ YA T+++ +R ++ E++ R+V +L
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDL 106
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 90.6 bits (215), Expect = 2e-17
Identities = 46/121 (38%), Positives = 70/121 (57%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDVTNSE 562
IEA D+ DG V RVF +G T + +KTCY H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 563 L 565
+
Sbjct: 133 V 133
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 88.2 bits (209), Expect = 1e-16
Identities = 54/114 (47%), Positives = 69/114 (60%), Gaps = 1/114 (0%)
Frame = +2
Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
TK+ S GL G VFE SLA LQ D RKF LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGF-TNKDSLSQRKTCYAXHTQVRAI 514
V KWQ ++EA+ DV T D Y+L +FC+G+ TN + R+ A + QV I
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQI 149
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 84.2 bits (199), Expect = 2e-15
Identities = 43/130 (33%), Positives = 69/130 (53%)
Frame = +2
Query: 161 TVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLT 340
T ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T
Sbjct: 47 TKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDIT 106
Query: 341 TDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRK 520
K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ +R +R
Sbjct: 107 RHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRA 166
Query: 521 KMCEIITRDV 550
+ E + ++
Sbjct: 167 GIYETLHNEL 176
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 80.2 bits (189), Expect = 3e-14
Identities = 40/128 (31%), Positives = 70/128 (54%)
Frame = +2
Query: 188 SEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 367
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 368 KWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRD 547
KW TLIE ++ T DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 548 VTNSELXE 571
N ++ +
Sbjct: 172 GINMDIKD 179
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 77.8 bits (183), Expect = 2e-13
Identities = 42/121 (34%), Positives = 69/121 (57%)
Frame = +2
Query: 179 KIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRW 358
++ + + RV+E+S AD+ D ++R F G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMV--NDLSHAYRLFSW-RSIAAGSEVYTQFAGMRLTHDKLDS 108
Query: 359 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEII 538
+++K++T+I+A++D T DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 539 T 541
T
Sbjct: 169 T 169
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 75.8 bits (178), Expect = 7e-13
Identities = 43/72 (59%), Positives = 51/72 (70%)
Frame = +2
Query: 155 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMD 334
L T TKIAS+G RVFEVSLADLQ D E +FRKF LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 335 LTTDKLRWMVKK 370
LT+DK+ ++K
Sbjct: 102 LTSDKITSQIRK 113
Score = 35.9 bits (79), Expect = 0.70
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +3
Query: 72 IVDPFTRKDWYDVKAP 119
+VDPF++KDWYDV AP
Sbjct: 21 VVDPFSKKDWYDVNAP 36
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 66.9 bits (156), Expect = 3e-10
Identities = 38/64 (59%), Positives = 43/64 (67%)
Frame = +2
Query: 155 LSTVPXATKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMD 334
L T TKIAS+GLKG VFE+SLADLQ D E +FRKF LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 335 LTTD 346
L+ D
Sbjct: 105 LSCD 108
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 54.4 bits (125), Expect = 2e-06
Identities = 41/127 (32%), Positives = 64/127 (50%)
Frame = +2
Query: 191 EGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 370
E + GRV E +L D+ D + + F I + V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDI-TKHHIKVFFRIYD-VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 371 WQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDV 550
+ I+ IDV T DGY +RV + FT + + KT +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFTTR----RAKT-----SQQRAIRKEMFKVIEENA 142
Query: 551 TNSELXE 571
+ E
Sbjct: 143 KECDFDE 149
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/122 (31%), Positives = 65/122 (53%)
Frame = +2
Query: 197 LKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 376
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 377 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDVTN 556
+ I+AN+DV T DG+V+RV FT K + S +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIKRARS---------SQMQAIREMMVDIVKKRASE 151
Query: 557 SE 562
++
Sbjct: 152 TD 153
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 53.6 bits (123), Expect = 3e-06
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 383 IEANIDVXTTDGYVLRVFCIGFT-NKDSLSQRKTCYAXHTQV 505
IE +DV T DGY LRV + FT + SQ++ A Q+
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMRQI 147
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 49.6 bits (113), Expect = 5e-05
Identities = 39/125 (31%), Positives = 57/125 (45%)
Frame = +2
Query: 197 LKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 376
L GRV E +L D+ D F ++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 377 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDVTN 556
+ + +V T DGY LRV + FT R+ C +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRCKT--SQKSAIRKVMQEIVEQKARE 148
Query: 557 SELXE 571
S L E
Sbjct: 149 STLDE 153
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 49.2 bits (112), Expect = 7e-05
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GRV E +L DL + ++ K VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNF--KKMHVKLYFKINRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 481
I+ +V T+DGY +RV + ++ S KT
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT 139
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 48.8 bits (111), Expect = 9e-05
Identities = 35/114 (30%), Positives = 58/114 (50%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GRV E +L D+ D + F + E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITR 544
I+AN+ V T DG+ +RV I T K A +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNK 146
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 45.6 bits (103), Expect = 9e-04
Identities = 28/95 (29%), Positives = 46/95 (48%)
Frame = +2
Query: 197 LKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 376
L GR+ E+SL DL + + + + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLT--NEHSKHMTRMYFKVDGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 377 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKT 481
+ I A ++V T DG+ +RV + T + KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 43.2 bits (97), Expect = 0.005
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 1/93 (1%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GR +L +L D+ A + F + V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDS-LSQRK 478
+EA+I V TTD Y +RV + T K + SQ K
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKKADRSQEK 132
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 42.3 bits (95), Expect = 0.008
Identities = 25/91 (27%), Positives = 49/91 (53%)
Frame = +2
Query: 185 ASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 364
+ E + GR++E++ + D +F ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 365 KKWQTLIEANIDVXTTDGYVLRVFCIGFTNK 457
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/83 (28%), Positives = 40/83 (48%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GR E +L DL D F ++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 383 IEANIDVXTTDGYVLRVFCIGFT 451
I +D+ T DG+ LRV + T
Sbjct: 108 INKVVDITTKDGFTLRVKTLALT 130
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 42.3 bits (95), Expect = 0.008
Identities = 24/93 (25%), Positives = 48/93 (51%)
Frame = +2
Query: 200 KGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 379
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 380 LIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRK 478
+ +DV T+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 42.3 bits (95), Expect = 0.008
Identities = 32/112 (28%), Positives = 52/112 (46%)
Frame = +2
Query: 203 GRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 382
GR E +L +L DA + K V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELT--NDASENNTKLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEII 538
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLV 142
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 36.7 bits (81), Expect = 0.40
Identities = 30/121 (24%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +2
Query: 206 RVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 382
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 383 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEIITRDVTNSE 562
+E +I + T V+ +F + +T +L Y +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 563 L 565
+
Sbjct: 178 I 178
>UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;
Alphaproteobacteria|Rep: FAD linked oxidase domain
protein - Methylobacterium extorquens PA1
Length = 990
Score = 35.5 bits (78), Expect = 0.92
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -3
Query: 314 RAHYVLAHIRRLX*ICGKTFPRQCQLVDQPGKLRKLFPSILPKQFSLXWVRLTSVVPTCL 135
R H V+AH R CG+T+ Q + R+ ++LP F R+ + P+CL
Sbjct: 774 RLHRVIAHEGRRPLCCGRTYLASGQTDRAREEARRTLDTLLP--FVRAGARVVGLEPSCL 831
Query: 134 LLNIERSLDIVP-IFASEWVDNLLL 63
L + L ++P ASE + LL
Sbjct: 832 LTFRDEFLSLLPRAEASELAQSALL 856
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 35.5 bits (78), Expect = 0.92
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -2
Query: 447 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINX 274
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 273 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVALG 166
L + + SV + S R S L F P EA+++A+G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 35.5 bits (78), Expect = 0.92
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 191 EGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 370
E + GRV VSL +L D + F ++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 371 WQTLIEANIDVXTTDG-YVLRVFCIGFT-NKDSLSQ 472
+ +++ I V L+V FT N LSQ
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTINHARLSQ 136
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 34.3 bits (75), Expect = 2.1
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -2
Query: 396 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINXNLRKDLSASVSACRSARET 217
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 216 SKTLPFNPSEAIFVALG-TVDKRGADLPL 133
++ + E +A G T+D+ A + L
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNL 188
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.1 bits (72), Expect = 4.9
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -2
Query: 399 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINXNLRKDLSASVSAC 235
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ +L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.7 bits (71), Expect = 6.5
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 285 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*XQPMDTFYVSSALVSPI 455
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
>UniRef50_Q08NP8 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 387
Score = 32.3 bits (70), Expect = 8.6
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -3
Query: 239 LVDQPGKLRKLFPSILPKQFSLXW 168
L QPG LR LFPS LP +L W
Sbjct: 255 LAAQPGTLRLLFPSALPGPLALSW 278
>UniRef50_A2F388 Cluster: C2 domain containing protein; n=1;
Trichomonas vaginalis G3|Rep: C2 domain containing
protein - Trichomonas vaginalis G3
Length = 846
Score = 32.3 bits (70), Expect = 8.6
Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 390 PTLM*XQPMDTFYVSSALVSPIRTP*ANARRATPXTLRSEQSERKCVKS-LHATSLTLN 563
P + + ++F VSS SP+ P + TP L SE KCV++ L++ S T N
Sbjct: 726 PIMSAIESRNSFLVSSISFSPVLDPNFSINGKTPLMLASEIGNVKCVEAILNSPSFTAN 784
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,613,988
Number of Sequences: 1657284
Number of extensions: 10645270
Number of successful extensions: 27627
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 26833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27612
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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