Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_N01
         (583 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...   202   7e-54
EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.           27   0.34 
AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.        27   0.59 
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    26   0.77 
AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsi...    24   3.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.2  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    23   9.5  

>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score =  202 bits (493), Expect = 7e-54
 Identities = 95/130 (73%), Positives = 112/130 (86%)
 Frame = +2

Query: 176 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLR 355
           TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF L+AE V GR+VL NFHGM LTTDKLR
Sbjct: 55  TKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLR 114

Query: 356 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAXHTQVRAIRKKMCEI 535
            MV KWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYA H+Q++ IR KM  I
Sbjct: 115 SMVNKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAI 174

Query: 536 ITRDVTNSEL 565
           I R++T+++L
Sbjct: 175 IKREITSTDL 184



 Score = 40.7 bits (91), Expect = 3e-05
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = +3

Query: 72  IVDPFTRKDWYDVKAP 119
           +VDPFTRKDWYDVKAP
Sbjct: 21  VVDPFTRKDWYDVKAP 36



 Score = 30.7 bits (66), Expect = 0.036
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +1

Query: 121 SMFSKRQVGTTLVNRTQXNENCFGRIEGKSF 213
           +MF  RQ G TLVNRTQ  +     ++G+ F
Sbjct: 37  NMFKNRQSGKTLVNRTQGTKIASDGLKGRVF 67


>EF519382-1|ABP68491.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 27.5 bits (58), Expect = 0.34
 Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 218 VSLADLQADTDA-ERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 379
           V+LA+L A +D  E    ++  I + +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 181 VNLAELAASSDTLEHLNLQYNFIYD-IQGQVVFAKLKTLDLSSNKLAFMGPEFQS 234


>AY344814-1|AAR03842.1|  286|Anopheles gambiae LRR Toll protein.
          Length = 286

 Score = 26.6 bits (56), Expect = 0.59
 Identities = 15/54 (27%), Positives = 28/54 (51%)
 Frame = +2

Query: 218 VSLADLQADTDAERSFRKFXLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 379
           V+LA+L A +D              +QG+ V      +DL+++KL +M  ++Q+
Sbjct: 106 VNLAELAASSDTLEHLNLQYNFMYDIQGQVVFAKLKTLDLSSNKLAFMGPEFQS 159


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 26.2 bits (55), Expect = 0.77
 Identities = 15/52 (28%), Positives = 24/52 (46%)
 Frame = +2

Query: 11  HGGREK*RPVEGR*KRC*EEDCRPIHSQRLVRCQGSALCSARGKSAPRLSTV 166
           H      RP  GR +R   ED       ++V  +G+ LC+A   +A   +T+
Sbjct: 124 HNRNSDPRPATGRKRRRIIEDSASPGVNKIVNSRGNTLCAASSPNAYTNTTI 175


>AJ000675-1|CAA04232.1|  600|Anopheles gambiae infection responsive
           serine proteaselike protein protein.
          Length = 600

 Score = 24.2 bits (50), Expect = 3.1
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +3

Query: 177 RKLLRKD*REEFSKFPWLIYKLTLTRKGLSAN 272
           ++ + +D R E+ +FPW++    L  +    N
Sbjct: 332 QRTINEDFRAEYGEFPWMVALFQLPEQRYCCN 363


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 227 PGKLRKLFPS-ILPK--QFSLXWVRLTSVVPTCLLLNIERSLDIVPIF 93
           P  L +L+ S  LP+  +F+  W+ L +   T     IERS D+V ++
Sbjct: 164 PRPLWQLYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVY 211


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 227 PGKLRKLFPS-ILPK--QFSLXWVRLTSVVPTCLLLNIERSLDIVPIF 93
           P  L +L+ S  LP+  +F+  W+ L +   T     IERS D+V ++
Sbjct: 164 PRPLWQLYDSPTLPESWKFNSTWLGLATTYGTEQSAIIERSSDVVSVY 211


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 53  KRC*EEDCRPIHSQR 97
           K C E+DC PI  +R
Sbjct: 103 KLCYEQDCEPIWKER 117


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,756
Number of Sequences: 2352
Number of extensions: 10624
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)