Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M24
(519 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161 102 2e-22
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 86 1e-17
01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129 85 2e-17
07_01_1001 - 8460467-8460799 65 3e-11
07_03_0321 + 16757414-16757743 59 2e-09
01_06_0098 - 26416768-26416998 31 0.42
08_01_0113 + 897970-898038,898148-898271,898811-898896,898996-89... 31 0.55
12_02_1217 + 27082452-27083593,27085041-27085158 29 1.7
11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877 29 2.2
12_01_0140 - 1088400-1088843 29 3.0
12_01_0090 + 717524-719080 28 5.2
10_08_0104 + 14824122-14824178,14824274-14824318,14824419-148245... 28 5.2
02_01_0545 + 3996568-3996645,3998061-3998168,3998409-3998493,399... 28 5.2
12_01_0141 - 1091579-1091983 27 6.8
05_01_0120 - 828834-831143 27 6.8
01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152 27 6.8
07_01_0461 + 3492302-3492413,3492868-3492964,3493053-3493131,349... 27 9.0
06_03_1287 - 29011710-29011871,29012209-29012272,29012556-290126... 27 9.0
01_06_0683 - 31173763-31174635,31175146-31175436 27 9.0
>05_05_0028 + 21691137-21691224,21691539-21691765,21692135-21692161
Length = 113
Score = 102 bits (245), Expect = 2e-22
Identities = 54/109 (49%), Positives = 72/109 (66%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLAVLGG T+P+A D++ IL SVG+EA+ E+L+ +++EL GKD+ ++IAAGREK +S+P
Sbjct: 7 YLLAVLGGNTSPSADDIKNILESVGVEANDERLEFLLSELEGKDITEVIAAGREKFASVP 66
Query: 283 VGGG---XXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
GGG EE K++ K K ESDDDMGF LFD
Sbjct: 67 SGGGGGIAVAAPTAAGGGAAPAEEAKKEEKVEEK--EESDDDMGFSLFD 113
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 86.2 bits (204), Expect = 1e-17
Identities = 47/109 (43%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA L G P+A D+ IL SVG E D K++ ++++L GKD+ ++IA+GREK +S+P
Sbjct: 200 YLLATLAGNPNPSAEDLTTILESVGAEVDHGKMELLLSQLAGKDITEIIASGREKFASVP 259
Query: 283 VGGG---XXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
GGG E K++ K K ESDDDMGF LFD
Sbjct: 260 CGGGGVAVAAAAPAAGGGAAPQSEAKKEEKVEEK--EESDDDMGFSLFD 306
>01_01_0642 + 4852218-4852305,4852655-4852884,4853103-4853129
Length = 114
Score = 85.4 bits (202), Expect = 2e-17
Identities = 44/108 (40%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YL+A L G ++P A D+ IL SVG E D K++ ++++++GKD+ +LIA GREK +S+P
Sbjct: 7 YLMAYLAGNSSPTAEDLTTILESVGCEIDNAKMELLLSQVSGKDITELIACGREKFASVP 66
Query: 283 VGGGXXXXXXXXXXXXXXXEEXKEDXKXXXK--XXSESDDDMGFGLFD 420
GGG + K K ESDDDMGF LFD
Sbjct: 67 SGGGGVAVAAAAPAAGGAGGAPAAEAKKEDKVEEKEESDDDMGFSLFD 114
>07_01_1001 - 8460467-8460799
Length = 110
Score = 65.3 bits (152), Expect = 3e-11
Identities = 36/106 (33%), Positives = 54/106 (50%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADVDEDKLGYLFDQVAGKDLSEILAAGSEMLAFGG 66
Query: 283 VGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
VG E+ KE+ K E +DD+ F LFD
Sbjct: 67 VGAAPAAAATAGGGAAAAGEKEKEE----EKVEEEEEDDIVFSLFD 108
>07_03_0321 + 16757414-16757743
Length = 109
Score = 58.8 bits (136), Expect = 2e-09
Identities = 35/106 (33%), Positives = 53/106 (50%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YL+A +GG +P DV IL +VG + D +KL + ++ GKD+ +++AAG E L+
Sbjct: 7 YLMATIGGNASPTKDDVRAILGAVGADIDEDKLGYLFDQVAGKDLAEILAAGSEMLAF-- 64
Query: 283 VGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
G E +E+ K K E +DD+ F LFD
Sbjct: 65 --GAAPAAAAATAGGAAAAGEKEEEEKVEEK-EKEGEDDIVFSLFD 107
>01_06_0098 - 26416768-26416998
Length = 76
Score = 31.5 bits (68), Expect = 0.42
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +1
Query: 136 PAAADVEKILSSVGIEADGEKLKKVITELNGKD 234
P V KI+ +V IEAD + K ++ L GKD
Sbjct: 16 PPPPAVVKIIETVHIEADSAEFKSIVQRLTGKD 48
>08_01_0113 +
897970-898038,898148-898271,898811-898896,898996-899049
Length = 110
Score = 31.1 bits (67), Expect = 0.55
Identities = 22/67 (32%), Positives = 27/67 (40%)
Frame = +1
Query: 220 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDD 399
L + V+ LI + + PV EE KE+ K ESDDD
Sbjct: 50 LEHRSVDDLILSVGSGGGAAPVAAAAAPAAGGGAAAAPAAEEKKEEAK------EESDDD 103
Query: 400 MGFGLFD 420
MGF LFD
Sbjct: 104 MGFSLFD 110
>12_02_1217 + 27082452-27083593,27085041-27085158
Length = 419
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKL 201
Y+LA+ TPA +D E+ VG +ADG+ L
Sbjct: 27 YVLALSSSCNTPACSDEEEEDDEVGSDADGDDL 59
>11_01_0139 - 1159748-1160173,1160229-1160301,1161600-1161877
Length = 258
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +1
Query: 127 KTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIA 252
KTT E +L+ + DG+K KKV+ L ++VE+L++
Sbjct: 137 KTTTEDDHEEVLLAYRSRKEDGKKRKKVVRRLGKEEVERLLS 178
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 187 DGEKLKKVITELNGKDVEQLIA 252
DG+K+KKV+ L ++VE+L++
Sbjct: 36 DGKKMKKVVKRLGKEEVERLLS 57
>12_01_0140 - 1088400-1088843
Length = 147
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 127 KTTPAAADVEKILSSVGI--EADGEKLKKVITELNGKDVEQLIA 252
KTT D E++L + + DG+K KKV+ L ++VE+L++
Sbjct: 25 KTTTTEDDHEEVLLAYRPREKEDGKKRKKVVRRLGKEEVERLLS 68
>12_01_0090 + 717524-719080
Length = 518
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -2
Query: 290 PPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIF 156
PP + S P ++ S+S SS + + + S S+PT L F
Sbjct: 60 PPAVLSPSLVCPVIVAFSSSQAPSSALLLFNHASSCSLPTPLPTF 104
>10_08_0104 +
14824122-14824178,14824274-14824318,14824419-14824536,
14825522-14825581,14825783-14825891,14825972-14826197,
14826274-14826390,14826510-14826611
Length = 277
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +1
Query: 112 AVLGGKTTPAAADVEKILSSVGIEADGEKLK 204
A+L GK TP D+E+ L + G GE++K
Sbjct: 14 ALLRGKETPVILDLEESLRAKGDMTQGEEVK 44
>02_01_0545 +
3996568-3996645,3998061-3998168,3998409-3998493,
3998789-3999024,3999250-3999423,3999510-3999557,
3999659-3999718,3999815-3999901,4000007-4000095,
4000209-4000300,4001110-4001171,4001271-4001420,
4001507-4001722
Length = 494
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +1
Query: 88 VTWPRYLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKV 210
+TW +LLA K A A+V+ +LS+ I D +LKK+
Sbjct: 283 LTWSVFLLAQNPSKMRKAQAEVDSVLSNETINVD--QLKKL 321
>12_01_0141 - 1091579-1091983
Length = 134
Score = 27.5 bits (58), Expect = 6.8
Identities = 11/24 (45%), Positives = 18/24 (75%)
Frame = +1
Query: 181 EADGEKLKKVITELNGKDVEQLIA 252
E DG+K KKV+ L ++VE+L++
Sbjct: 30 EEDGKKRKKVVRRLGKEEVERLLS 53
>05_01_0120 - 828834-831143
Length = 769
Score = 27.5 bits (58), Expect = 6.8
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = -2
Query: 266 FSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTAS 108
F P+++S +S+ S SPS S PT L + S+ L PS+ S
Sbjct: 503 FLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASSNFSHTLVPSSRS 555
>01_01_1092 - 8593414-8593776,8597750-8597931,8598080-8598152
Length = 205
Score = 27.5 bits (58), Expect = 6.8
Identities = 16/34 (47%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = -2
Query: 203 LSFSPSASIPTELRI--FSTSAAAGVVLPPSTAS 108
LS+SPSAS T+L I + + A V PPS++S
Sbjct: 114 LSYSPSASSITDLPIAPYPLNYAVAPVAPPSSSS 147
>07_01_0461 +
3492302-3492413,3492868-3492964,3493053-3493131,
3493484-3493794,3494219-3494231
Length = 203
Score = 27.1 bits (57), Expect = 9.0
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -2
Query: 293 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIP 174
PPP PAA+ S S+P S+V+ ++ PSA +P
Sbjct: 122 PPPEPTPTPAPAPAAVPPSASVP-STVVPPVAAPPSALLP 160
>06_03_1287 -
29011710-29011871,29012209-29012272,29012556-29012611,
29012787-29012984
Length = 159
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 340 EEXKEDXKXXXKXXSESDDDMGFGLFD 420
EE KE+ K ES+DD+GF LFD
Sbjct: 139 EEKKEEEK------EESEDDLGFSLFD 159
>01_06_0683 - 31173763-31174635,31175146-31175436
Length = 387
Score = 27.1 bits (57), Expect = 9.0
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = -2
Query: 287 PTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAG------VVL 126
P+G + S P+A + + S S + F P A +P + R + AA G +VL
Sbjct: 133 PSGGFSTASVPSAQAQAASAAASMAVQPGGFLPEAPVPAKARSKRSRAAPGNWSSRLLVL 192
Query: 125 PPSTAS 108
PP AS
Sbjct: 193 PPPPAS 198
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,438,862
Number of Sequences: 37544
Number of extensions: 196605
Number of successful extensions: 599
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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