Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M24
(519 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 105 9e-23
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 105 9e-23
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 105 9e-23
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 105 9e-23
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 105 9e-23
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 105 9e-23
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 105 9e-23
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 105 9e-23
AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein pr... 35 0.20
M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic ri... 34 0.34
CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein. 34 0.34
CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein. 34 0.34
BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, larg... 34 0.34
BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, larg... 34 0.34
AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1 pr... 34 0.34
AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal phosph... 31 1.8
AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens ... 31 1.8
AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting pro... 31 1.8
AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein. 31 1.8
AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated pr... 31 2.4
AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated pr... 31 2.4
AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens ... 31 2.4
AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein. 31 2.4
AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein pr... 31 3.2
AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens ... 31 3.2
AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated pr... 31 3.2
AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein. 29 7.4
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 29 9.8
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 29 9.8
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 29 9.8
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 29 9.8
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 29 9.8
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 29 9.8
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 29 9.8
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 29 9.8
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 29 9.8
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 105 bits (252), Expect = 9e-23
Identities = 55/109 (50%), Positives = 69/109 (63%), Gaps = 3/109 (2%)
Frame = +1
Query: 103 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 282
YLLA LGG ++P+A D++KIL SVGIEAD ++L KVI+ELNGK++E +IA G KL+S+P
Sbjct: 7 YLLAALGGNSSPSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASVP 66
Query: 283 VGGGXXXXXX--XXXXXXXXXEEXKEDXKXXXKXXS-ESDDDMGFGLFD 420
GG E+ K K S ESDDDMGFGLFD
Sbjct: 67 AGGAVAVSAAPGSAAPAAGSAPAAAEEKKDEKKEESEESDDDMGFGLFD 115
>AJ404607-1|CAB94913.2| 264|Homo sapiens hypothetical protein
protein.
Length = 264
Score = 34.7 bits (76), Expect = 0.20
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 131 PRQLPLTLRRS-----SAPSVSKLTVRSLRK*SLSSTARMLNNLLRPDVRSCRQC 280
P QLPL+LRR S PS S +RSL S +S++R + RSC +C
Sbjct: 66 PAQLPLSLRRRCSRPRSRPSSSSRAIRSLWSRSRTSSSRWFTSDTSSSSRSCSRC 120
>M17886-1|AAA36471.1| 114|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P1 mRNA, complete cds. ).
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>CR542209-1|CAG47005.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>CR450339-1|CAG29335.1| 114|Homo sapiens RPLP1 protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>BC007590-1|AAH07590.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>BC003369-1|AAH03369.1| 114|Homo sapiens ribosomal protein, large,
P1 protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>AB061836-1|BAB79474.1| 114|Homo sapiens ribosomal protein P1
protein.
Length = 114
Score = 33.9 bits (74), Expect = 0.34
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLFD 420
P G EE K + K + ESDDDMGFGLFD
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLFD 114
>AY303789-1|AAP68820.1| 113|Homo sapiens acidic ribosomal
phosphoprotein P1 protein.
Length = 113
Score = 31.5 bits (68), Expect = 1.8
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = +1
Query: 280 PVGGGXXXXXXXXXXXXXXXEEXKEDXKXXXKXXSESDDDMGFGLF 417
P G EE K + K + ESDDDMGFGLF
Sbjct: 70 PAAGAAPAGGPAPSTAAAPAEEKKVEAKK--EESEESDDDMGFGLF 113
>AK126665-1|BAC86634.1| 1012|Homo sapiens protein ( Homo sapiens
cDNA FLJ44709 fis, clone BRACE3019570, highly similar
to Rattus norvegicus SNAP-25-interacting protein (SNIP).
).
Length = 1012
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 124 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 282
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 765 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 818
>AB127405-1|BAD03968.1| 1183|Homo sapiens SNAP-25-interacting protein
protein.
Length = 1183
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 124 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 282
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 893 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 946
>AB051471-1|BAB21775.1| 762|Homo sapiens KIAA1684 protein protein.
Length = 762
Score = 31.5 bits (68), Expect = 1.8
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 124 GKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGR-EKLSSMP 282
G TP V+K +S E D E+ + +T+ + KD+ +L+ + E L ++P
Sbjct: 472 GLDTPGKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIP 525
>AL354989-1|CAI15298.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 290 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 114
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 113 A 111
+
Sbjct: 723 S 723
>AL139113-5|CAI39657.1| 1119|Homo sapiens ubiquitin associated
protein 2 protein.
Length = 1119
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 290 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 114
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 663 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 722
Query: 113 A 111
+
Sbjct: 723 S 723
>AK074884-1|BAC11266.1| 597|Homo sapiens protein ( Homo sapiens
cDNA FLJ90403 fis, clone NT2RP2006042, weakly similar to
GLUCOAMYLASE S1/S2 PRECURSOR (EC 3.2.1.3). ).
Length = 597
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 290 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 114
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 141 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 200
Query: 113 A 111
+
Sbjct: 201 S 201
>AB040924-1|BAA96015.1| 757|Homo sapiens KIAA1491 protein protein.
Length = 757
Score = 31.1 bits (67), Expect = 2.4
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = -2
Query: 290 PPTGIDDSFSRPAAISCSTSLPLSSVIT-FLSFSPSASIPTELRIFSTSAAAGVVLPPST 114
PP+ + S P+ SC+ LP +S T L+ SP + + + L +S +A L ST
Sbjct: 301 PPSALPSVSSLPSTTSCTALLPSTSQHTGDLTSSPLSQLSSSLSSHQSSLSAHAALSSST 360
Query: 113 A 111
+
Sbjct: 361 S 361
>AL096857-1|CAB51071.1| 2701|Homo sapiens hypothetical protein
protein.
Length = 2701
Score = 30.7 bits (66), Expect = 3.2
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Frame = -2
Query: 461 TGIATSAAYFCKV*SKRPKPMSSSDSEXXXXSXXLSSXF-SSXXXXXXXXXXXXXXAPPP 285
T A+ V + P+ +S S +S+ +S AP P
Sbjct: 1781 TSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAP 1840
Query: 284 TGIDDSFSRPAAIS--CSTSLP-LSSVITFLSF--------SPSASIPTELRIFSTSAAA 138
T I S S PA+++ S S+P L+S + S SP+A + T I +++ A
Sbjct: 1841 TPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTA 1900
Query: 137 GVVLPPSTASK*RGHVTHFLSPN 69
V L P++AS T +PN
Sbjct: 1901 SVPLAPASASAPAPAPTPVSAPN 1923
>AK092426-1|BAC03887.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ35107 fis, clone PLACE6006871, moderately
similar to SUPPRESSOR PROTEIN SRP40. ).
Length = 258
Score = 30.7 bits (66), Expect = 3.2
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = -2
Query: 398 SSSDSEXXXXSXXLSSXFSSXXXXXXXXXXXXXXAPPPTGIDDSFSRPAAISCSTSLPLS 219
SSS S S LSS S + P + S S P++ S STS P S
Sbjct: 38 SSSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSS--SHSSSSPSS-SSSTSSPSS 94
Query: 218 SVITFLSFSPSAS 180
S + S SPS+S
Sbjct: 95 SSSSSSSSSPSSS 107
>AF488829-1|AAO49478.1| 2701|Homo sapiens HBxAg transactivated protein
2 protein.
Length = 2701
Score = 30.7 bits (66), Expect = 3.2
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 12/143 (8%)
Frame = -2
Query: 461 TGIATSAAYFCKV*SKRPKPMSSSDSEXXXXSXXLSSXF-SSXXXXXXXXXXXXXXAPPP 285
T A+ V + P+ +S S +S+ +S AP P
Sbjct: 1781 TSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSSAPASAPAP 1840
Query: 284 TGIDDSFSRPAAIS--CSTSLP-LSSVITFLSF--------SPSASIPTELRIFSTSAAA 138
T I S S PA+++ S S+P L+S + S SP+A + T I +++ A
Sbjct: 1841 TPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTA 1900
Query: 137 GVVLPPSTASK*RGHVTHFLSPN 69
V L P++AS T +PN
Sbjct: 1901 SVPLAPASASAPAPAPTPVSAPN 1923
>AB029019-1|BAA83048.2| 1919|Homo sapiens KIAA1096 protein protein.
Length = 1919
Score = 29.5 bits (63), Expect = 7.4
Identities = 34/124 (27%), Positives = 52/124 (41%), Gaps = 12/124 (9%)
Frame = -2
Query: 404 PMSSSDSEXXXXSXXLSSXF-SSXXXXXXXXXXXXXXAPPPTGIDDSFSRPAAIS--CST 234
P+ S S +S+ +S AP PT I S S PA+++ S
Sbjct: 823 PLPPSTLAPVSASASVSASVPASTSAAAITSSSAPASAPAPTPILASVSTPASVTILASA 882
Query: 233 SLP-LSSVITFLSF--------SPSASIPTELRIFSTSAAAGVVLPPSTASK*RGHVTHF 81
S+P L+S + S SP+A + T I +++ A V L P++AS T
Sbjct: 883 SIPILASALASTSAPTPAPAASSPAAPVITAPTIPASAPTASVPLAPASASAPAPAPTPV 942
Query: 80 LSPN 69
+PN
Sbjct: 943 SAPN 946
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 244 ESDEDMGFGLFD 255
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 146 ESDEDMGFGLFD 157
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 243 ESDEDMGFGLFD 254
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 29.1 bits (62), Expect = 9.8
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 385 ESDDDMGFGLFD 420
ESD+DMGFGLFD
Sbjct: 306 ESDEDMGFGLFD 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,253,856
Number of Sequences: 237096
Number of extensions: 950046
Number of successful extensions: 2336
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 2236
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2323
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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