Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M21
(447 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 53 9e-08
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 53 1e-07
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 46 2e-05
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 31 0.42
10_01_0146 - 1719997-1720386,1721498-1721515 29 1.3
01_06_1244 - 35686059-35686142,35686314-35686423,35686607-356867... 29 2.3
05_06_0228 + 26570066-26571352 28 3.9
03_05_0350 + 23368111-23368219,23368519-23368526,23368650-233686... 28 3.9
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 3.9
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 27 4.8
12_02_1263 + 27423411-27423464,27423985-27424104,27424200-274242... 27 5.2
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 27 5.2
03_05_0742 + 27310404-27310457,27311281-27311286,27311350-273114... 27 5.2
03_02_0025 + 5084003-5084303,5084449-5084639,5084793-5084873,508... 27 5.2
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 27 6.9
08_01_0107 - 789217-789984,790070-790219,790303-790890,790968-79... 27 9.1
04_04_1699 + 35462160-35462555,35463114-35463196,35463317-354633... 27 9.1
02_01_0782 + 5827364-5827441,5827733-5827787,5828761-5828849,582... 27 9.1
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 53.2 bits (122), Expect = 9e-08
Identities = 25/42 (59%), Positives = 33/42 (78%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 357
V+SERL++ GSLARRA+ +L ++GLI+ V H Q IYTRAT
Sbjct: 65 VLSERLRINGSLARRAMKDLMDRGLIRMVSVHCSQQIYTRAT 106
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
+NN VLFD+ TY+KL EVP+YK ITP+
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPS 64
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 52.8 bits (121), Expect = 1e-07
Identities = 25/42 (59%), Positives = 32/42 (76%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 357
V+SERL++ GSLARRA+ +L +GLI+ V H Q IYTRAT
Sbjct: 65 VLSERLRINGSLARRAINDLMTRGLIRMVSVHSSQQIYTRAT 106
Score = 44.0 bits (99), Expect = 6e-05
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
+NN VLFD+ TY+KL EVP+YK ITP+
Sbjct: 37 VNNSVLFDQATYDKLLSEVPKYKQITPS 64
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/28 (67%), Positives = 23/28 (82%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
+NN VLFDK TY+KL EVP+YK ITP+
Sbjct: 971 VNNSVLFDKATYDKLLSEVPKYKQITPS 998
Score = 40.3 bits (90), Expect = 7e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +1
Query: 253 VRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 357
+ GSLAR+A+ +L +G I+ V H Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 31.1 bits (67), Expect = 0.42
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 38 REGFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPGV 163
R G G + + E G+ +WR+ +EEE Q+K + E+ V
Sbjct: 345 RGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +1
Query: 34 RTRRLRPNSLKKHRRRRKDPVAAKPRRRS 120
R ++P+ + RRRR +P +PRRR+
Sbjct: 77 RAAEMQPDDGGQRRRRRSEPATTQPRRRA 105
>01_06_1244 -
35686059-35686142,35686314-35686423,35686607-35686705,
35686820-35687045
Length = 172
Score = 28.7 bits (61), Expect = 2.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 1 VFPTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSG 123
+FPT+ A P +R + + HRRR+ VAA P SG
Sbjct: 14 IFPTTASAAPV-SRSVSVDQRVSHRRRKAVAVAAVPHASSG 53
>05_06_0228 + 26570066-26571352
Length = 428
Score = 27.9 bits (59), Expect = 3.9
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 6/54 (11%)
Frame = -3
Query: 163 NTW---LFNLSRTFPLDHFFFLALPPPD---PSFFFCVF*GCLAEAFASFLGXH 20
N+W L L P +LALP D P+ C+ GC A AF+ G H
Sbjct: 38 NSWRVALAKLEAPAPPPPLPWLALPESDDGLPATVSCILSGCRAHAFSVLQGAH 91
>03_05_0350 +
23368111-23368219,23368519-23368526,23368650-23368658,
23368768-23368839,23368978-23369097,23369638-23370058,
23370131-23370285,23370461-23370625,23370822-23370825,
23371739-23371799,23371933-23372035,23372422-23372854,
23372978-23373120,23373608-23373740,23375567-23375576,
23375852-23375975,23376595-23377012,23377153-23377343,
23377569-23377811
Length = 973
Score = 27.9 bits (59), Expect = 3.9
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +2
Query: 218 NHTCLSYLKD*RSEVPWREEHSSSLGKKVSSNR*SNTMGR*STHVRP 358
N SY + W ++ SSS G K+ + R SNT + S + P
Sbjct: 512 NDISTSYHDQPKGNKHWMQKDSSSKGNKIGNTRSSNTPSKFSGCILP 558
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 27.9 bits (59), Expect = 3.9
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 314 CLMRPFSLSSMSALLAREPRTFNL 243
C +RP S +++ AL+AR PR L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 26.6 bits (56), Expect = 9.1
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 31 RRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKEK 135
RR RR + ++ RRRRKD K + + +E+
Sbjct: 135 RRRRRRKEREEEERRRRRKDKERRKRKEKERERER 169
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 10 TSNDAXPRRTRRLRPNSLKKHRRRR 84
+ D+ RR RR R ++HRRRR
Sbjct: 71 SGEDSGERRKRR-RKEKERRHRRRR 94
Score = 23.0 bits (47), Expect(2) = 4.8
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +1
Query: 64 KKHRRRRKDPVAAKPRRRSGPKEK 135
++ RRRRK+ + RRR KE+
Sbjct: 134 RRRRRRRKEREEEERRRRRKDKER 157
>12_02_1263 +
27423411-27423464,27423985-27424104,27424200-27424298,
27424405-27424542,27424647-27424706,27424865-27425044,
27425132-27425338,27425415-27425534,27425609-27425728,
27425819-27425941,27426074-27426178,27426379-27426523,
27426967-27427131,27427228-27427466,27427553-27427585,
27427894-27427975,27428100-27428260,27428422-27428607,
27428700-27428882,27428969-27429147,27429386-27429482
Length = 931
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 268 PGNLGPLIFQIRQ--AGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 107
PG L F + Q A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 766 PGFLLVFAFLVAQLIATLIAVYADWAFTSIKGIGWGWAGIVWLYNLIFYFPLDIIKFL 823
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 27.5 bits (58), Expect = 5.2
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 44 GFGQTASKNTEEEGRIRWRQSQEEEVVQRKSS*QVEQPG 160
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>03_05_0742 + 27310404-27310457,27311281-27311286,27311350-27311469,
27311597-27311695,27311787-27311795,27311843-27311980,
27312084-27312218,27312308-27312517,27312592-27312798,
27312891-27313010,27313079-27313198,27313279-27313401,
27313501-27313605,27313764-27313908,27314658-27315148,
27315236-27315268,27315556-27315637,27315747-27315907,
27316021-27316206,27316294-27316476,27316573-27316751,
27317009-27317105
Length = 1000
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = -3
Query: 268 PGNLGPLIFQIRQ--AGVISLYCGTSLYSFSYVGL--SNNTWLFNLSRTFPLDHFFFL 107
PG L F + Q A +I++Y + S +G + WL+NL FPLD FL
Sbjct: 835 PGFLLVFAFFVAQLIATLIAVYANWAFTSIKGIGWGWAGIVWLYNLVFYFPLDIIKFL 892
>03_02_0025 +
5084003-5084303,5084449-5084639,5084793-5084873,
5084972-5085319,5085409-5086293
Length = 601
Score = 27.5 bits (58), Expect = 5.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 26 AQEGREGFGQTASKNTEEEGRIRWRQSQEEE 118
A+E EG G K EEE R R R+ +EEE
Sbjct: 468 AEEEEEGGGGKGEKEREEEER-RQREKEEEE 497
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +1
Query: 253 VRGSLARRALIELREKGLIKQVVQHHGQVIYT 348
+RG +RAL +R+ G I++VVQ+ Q Y+
Sbjct: 239 IRGIGGQRALKLIRQHGYIEEVVQNLSQTRYS 270
>08_01_0107 -
789217-789984,790070-790219,790303-790890,790968-791093
Length = 543
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +1
Query: 193 TRKSHSTS*SHLPVVSERLKVRGSLARRALIELREKGLIK 312
TR S S H + + RG LARRAL L KGL+K
Sbjct: 115 TRPSSSFVREHYAAIVVQTAFRGYLARRALRAL--KGLVK 152
>04_04_1699 +
35462160-35462555,35463114-35463196,35463317-35463378,
35463745-35463806,35463932-35463991,35464079-35464111,
35464196-35464261,35464349-35464393
Length = 268
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 40 RRLRPNSLKKHRRRRKDPVAAKPRRRSGP 126
R+ P KHRR R D A PR+R P
Sbjct: 31 RQRPPPGPTKHRRLRHDADAQPPRKRGHP 59
>02_01_0782 +
5827364-5827441,5827733-5827787,5828761-5828849,
5829167-5829191,5829645-5829683,5830316-5830433,
5830857-5831023,5831155-5831518,5831589-5831701,
5832185-5832310,5832436-5833339,5833694-5834036
Length = 806
Score = 26.6 bits (56), Expect = 9.1
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +1
Query: 13 SNDAXPRRTRRLRPNSLKKHRR--RRKDPVAAKPRRRSGPKEK 135
S+ + RR RR R + KH+R R++D + RR+ K K
Sbjct: 265 SSSSDDRRRRRKRHSKKDKHKRGKRKRDRRRERKRRKRDRKSK 307
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,670,329
Number of Sequences: 37544
Number of extensions: 255600
Number of successful extensions: 879
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 858
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 879
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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