Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M21
(447 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein. 64 2e-10
BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25 p... 64 2e-10
BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25 p... 64 2e-10
BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25 p... 64 2e-10
AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25 p... 64 2e-10
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 38 0.021
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 38 0.021
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 33 0.59
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 33 0.59
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 33 0.59
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 33 0.59
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 33 0.59
AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens ... 31 2.4
DQ533874-1|ABF83431.1| 1378|Homo sapiens ROBO2 isoform b protein. 30 4.1
DQ533873-1|ABF83430.1| 1394|Homo sapiens ROBO2 isoform a protein. 30 4.1
BC146772-1|AAI46773.1| 1378|Homo sapiens roundabout, axon guidan... 30 4.1
AB046788-1|BAB13394.1| 1380|Homo sapiens KIAA1568 protein protein. 30 4.1
BC068275-1|AAH68275.1| 609|Homo sapiens G protein-coupled recep... 29 7.2
AY211916-1|AAO65169.1| 219|Homo sapiens sarcoma antigen NY-SAR-... 29 9.5
AF479418-1|AAO14651.1| 1227|Homo sapiens FOE protein. 29 9.5
>M64716-1|AAA16105.1| 125|Homo sapiens ribosomal protein protein.
Length = 125
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATXGDDPVA 378
VVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR T G D A
Sbjct: 72 VVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
LNN VLFDK TY+KL KEVP YKLITPA
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPA 71
>BC004986-1|AAH04986.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATXGDDPVA 378
VVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR T G D A
Sbjct: 72 VVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
LNN VLFDK TY+KL KEVP YKLITPA
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPA 71
>BC004294-1|AAH04294.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATXGDDPVA 378
VVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR T G D A
Sbjct: 72 VVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
LNN VLFDK TY+KL KEVP YKLITPA
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPA 71
>BC003537-1|AAH03537.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATXGDDPVA 378
VVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR T G D A
Sbjct: 72 VVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
LNN VLFDK TY+KL KEVP YKLITPA
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPA 71
>AB061844-1|BAB79482.1| 125|Homo sapiens ribosomal protein S25
protein.
Length = 125
Score = 64.5 bits (150), Expect = 2e-10
Identities = 34/49 (69%), Positives = 36/49 (73%)
Frame = +1
Query: 232 VVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATXGDDPVA 378
VVSERLK+RGSLAR AL EL KGLIK V +H QVIYTR T G D A
Sbjct: 72 VVSERLKIRGSLARAALQELLSKGLIKLVSKHRAQVIYTRNTKGGDAPA 120
Score = 50.8 bits (116), Expect = 2e-06
Identities = 23/28 (82%), Positives = 24/28 (85%)
Frame = +3
Query: 147 LNNQVLFDKPTYEKLYKEVPQYKLITPA 230
LNN VLFDK TY+KL KEVP YKLITPA
Sbjct: 44 LNNLVLFDKATYDKLCKEVPNYKLITPA 71
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 37.5 bits (83), Expect = 0.021
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 374 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 37.5 bits (83), Expect = 0.021
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 374 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPKTRDSP 413
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 370 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 375 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 415
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 32.7 bits (71), Expect = 0.59
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +1
Query: 7 PTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAA-KPRRRSGP 126
P + PR+TRRL P++ RR R P A P+ R P
Sbjct: 370 PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSP 410
>AK097034-1|BAC04932.1| 120|Homo sapiens protein ( Homo sapiens
cDNA FLJ39715 fis, clone SMINT2013228. ).
Length = 120
Score = 30.7 bits (66), Expect = 2.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 207 VGLPCTVSHTWVYQTTPGCSTCH 139
+GL T +HTW Y+ P CS C+
Sbjct: 20 LGLLHTHTHTWYYRCEPTCSACY 42
>DQ533874-1|ABF83431.1| 1378|Homo sapiens ROBO2 isoform b protein.
Length = 1378
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 4 FPTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSG 123
F T ++ ++ RP KKH+ R D A P RR G
Sbjct: 1269 FSTDSNTSAALSQSQRPRPTKKHKGGRMDQQPALPHRREG 1308
>DQ533873-1|ABF83430.1| 1394|Homo sapiens ROBO2 isoform a protein.
Length = 1394
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 4 FPTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSG 123
F T ++ ++ RP KKH+ R D A P RR G
Sbjct: 1285 FSTDSNTSAALSQSQRPRPTKKHKGGRMDQQPALPHRREG 1324
>BC146772-1|AAI46773.1| 1378|Homo sapiens roundabout, axon guidance
receptor, homolog 2 (Drosophila) protein.
Length = 1378
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 4 FPTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSG 123
F T ++ ++ RP KKH+ R D A P RR G
Sbjct: 1269 FSTDSNTSAALSQSQRPRPTKKHKGGRMDQQPALPHRREG 1308
>AB046788-1|BAB13394.1| 1380|Homo sapiens KIAA1568 protein protein.
Length = 1380
Score = 29.9 bits (64), Expect = 4.1
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 4 FPTSNDAXPRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSG 123
F T ++ ++ RP KKH+ R D A P RR G
Sbjct: 1271 FSTDSNTSAALSQSQRPRPTKKHKGGRMDQQPALPHRREG 1310
>BC068275-1|AAH68275.1| 609|Homo sapiens G protein-coupled receptor
153 protein.
Length = 609
Score = 29.1 bits (62), Expect = 7.2
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 8/46 (17%)
Frame = +1
Query: 13 SNDAXPRRTRR--------LRPNSLKKHRRRRKDPVAAKPRRRSGP 126
+ DA P R RR LRP++L R +D PRRR GP
Sbjct: 444 AEDAPPSRARRRSAESLLSLRPSALDSGPRGARDSPPGSPRRRPGP 489
>AY211916-1|AAO65169.1| 219|Homo sapiens sarcoma antigen NY-SAR-29
protein.
Length = 219
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +1
Query: 28 PRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGP 126
PRR+ R RP + R R D V A P R GP
Sbjct: 7 PRRSERGRPARARGRWRPRSDRVPAVPSPRLGP 39
>AF479418-1|AAO14651.1| 1227|Homo sapiens FOE protein.
Length = 1227
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1
Query: 28 PRRTRRLRPNSLKKHRRRRKDPVAAKPRRRSGPKE 132
P +T L + K+ RRRR+ PVA P R G E
Sbjct: 5 PVQTPALTIHRRKRRRRRRRRPVAKAPARLRGEYE 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,245,994
Number of Sequences: 237096
Number of extensions: 1530656
Number of successful extensions: 3756
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3497
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3726
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3644351872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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