Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M17
(625 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical pr... 31 0.88
AL031627-11|CAA20962.2| 355|Caenorhabditis elegans Hypothetical... 29 2.7
AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like ... 29 2.7
AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical ... 29 2.7
AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical ... 29 2.7
AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical ... 29 2.7
Z74029-3|CAE17749.1| 113|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 27 8.2
AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical ... 27 8.2
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 27 8.2
>Z82261-5|CAH60756.1| 304|Caenorhabditis elegans Hypothetical
protein C35D6.9a protein.
Length = 304
Score = 30.7 bits (66), Expect = 0.88
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = +2
Query: 236 EDNATKPVPILCYSTELAFNVILLCAVYRKDLCLMTTFVYFGITSLTTSILIYSVVIVAT 415
+D T P + + ++ NV LC CL + G+ L IL+Y ++ + T
Sbjct: 44 QDQETLLFPAVNHFYQMTRNVFFLCIAMIFFACLSLLERFSGLFKLLPLILMY-IIYIIT 102
Query: 416 GAFMKIAIVLXI-LFQLYVILLVRSMIVEI-KQA 511
F + +L F LY I IV+I KQA
Sbjct: 103 QIFSFLTFLLSFQRFILYFISSSEPYIVQIQKQA 136
>AL031627-11|CAA20962.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5C.21 protein.
Length = 355
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/89 (15%), Positives = 42/89 (47%)
Frame = +2
Query: 263 ILCYSTELAFNVILLCAVYRKDLCLMTTFVYFGITSLTTSILIYSVVIVATGAFMKIAIV 442
++ Y T +A + + + LC++ FV+ + +L + +Y++ + A++ + +
Sbjct: 50 VIIYKTPIAMKISKIPLLINHSLCVILDFVFCTLCTLYIFVPMYAMSGIGVLAWIGVPTL 109
Query: 443 LXILFQLYVILLVRSMIVEIKQAXXNELL 529
L ++ +L + + ++ + LL
Sbjct: 110 LQVIIFFVAMLCATFSYIYLFESRASSLL 138
>AF324488-1|AAK49909.1| 314|Caenorhabditis elegans B0212.4-like
protein protein.
Length = 314
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 335 LMTTFVYFGITSLTTSILIYSVVIVATGA 421
++T ++ +G+T +T+S+++YS+ VA A
Sbjct: 244 ILTVYLVYGVTLVTSSVVVYSLFPVAPPA 272
>AF045639-4|AAV58895.1| 313|Caenorhabditis elegans Hypothetical
protein B0212.4c protein.
Length = 313
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 335 LMTTFVYFGITSLTTSILIYSVVIVATGA 421
++T ++ +G+T +T+S+++YS+ VA A
Sbjct: 243 ILTVYLVYGVTLVTSSVVVYSLFPVAPPA 271
>AF045639-3|AAL11098.1| 383|Caenorhabditis elegans Hypothetical
protein B0212.4b protein.
Length = 383
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 335 LMTTFVYFGITSLTTSILIYSVVIVATGA 421
++T ++ +G+T +T+S+++YS+ VA A
Sbjct: 313 ILTVYLVYGVTLVTSSVVVYSLFPVAPPA 341
>AF045639-2|AAC02568.2| 382|Caenorhabditis elegans Hypothetical
protein B0212.4a protein.
Length = 382
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/29 (34%), Positives = 22/29 (75%)
Frame = +2
Query: 335 LMTTFVYFGITSLTTSILIYSVVIVATGA 421
++T ++ +G+T +T+S+++YS+ VA A
Sbjct: 312 ILTVYLVYGVTLVTSSVVVYSLFPVAPPA 340
>Z74029-3|CAE17749.1| 113|Caenorhabditis elegans Hypothetical
protein C45B11.5 protein.
Length = 113
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Frame = +2
Query: 275 STELAFNVILLCAVYRKD---LCLMTTFVYFGITSLTTSILIYSV 400
+TE+ NV +L + Y+ D CL+ TF+ GI L + IY++
Sbjct: 4 TTEVFDNVEVLISRYQNDQLLFCLVVTFITIGIFLLCGAWCIYAI 48
>Z81066-1|CAB02970.1| 919|Caenorhabditis elegans Hypothetical
protein F17B5.2 protein.
Length = 919
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 600 TWVSASCTIRACLLRRRELITTVG 529
TW+ ASCTIR C+ + T G
Sbjct: 833 TWLGASCTIRGCVWTDWNTVGTEG 856
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 256 WFCCVVLKETVLN*LY-DGRITFIADSYYR 170
W C +VLKE VL LY + A S YR
Sbjct: 486 WLCYIVLKEKVLKTLYSENAFLLSASSEYR 515
>AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical
protein Y44A6B.1 protein.
Length = 319
Score = 27.5 bits (58), Expect = 8.2
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = +2
Query: 272 YSTELAFNVILLCAVYRK--DLCLMTTFVYFGITSLTTSILIYSVVIV 409
+S L FN+ L C +Y + L T ++Y I S + I++ + +
Sbjct: 12 FSVSLVFNLYLFCVIYAQPDKNKLPTVYIYNMIISSSVDIIVMFITFI 59
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = -1
Query: 256 WFCCVVLKETVLN*LY-DGRITFIADSYYR 170
W C +VLKE VL LY + A S YR
Sbjct: 486 WLCYIVLKEKVLKTLYSENAFLLSASSEYR 515
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,382,009
Number of Sequences: 27780
Number of extensions: 223621
Number of successful extensions: 484
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 484
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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