Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M15
         (490 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0507 + 3655570-3655573,3655648-3655832                           82   2e-16
04_04_0165 + 23247265-23247472,23248115-23248407,23249182-232492...    33   0.16 
02_02_0664 - 12747888-12747900,12748161-12748229,12748332-127483...    30   1.1  
04_04_1504 + 34035109-34035198,34035586-34036002,34038385-34039017     28   4.6  
04_04_0076 + 22558105-22558261,22558356-22558405,22559837-225600...    27   6.1  
02_05_0021 - 25101738-25101881,25119662-25120331,25122562-251237...    27   6.1  

>06_01_0507 + 3655570-3655573,3655648-3655832
          Length = 62

 Score = 82.2 bits (194), Expect = 2e-16
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = +2

Query: 254 GKVHGSLARAGKVKGQTPKVEXXXXXXXXTGRAXRRIQYNRRFVNVVQTFGRRRGPNSN 430
           GKVHGSLARAGKV+GQTPKV          GRA +R+QYNRRFV  V  FG++RGPNS+
Sbjct: 2   GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSS 60


>04_04_0165 +
           23247265-23247472,23248115-23248407,23249182-23249239,
           23249302-23250014
          Length = 423

 Score = 32.7 bits (71), Expect = 0.16
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 94  PGVHWSDQGTHSYSCCSWR*XPYSIIMWS 180
           PG+HW++Q    YS CS    P  I MW+
Sbjct: 378 PGIHWNNQWMRGYSDCSHWCLPGPIDMWN 406


>02_02_0664 -
           12747888-12747900,12748161-12748229,12748332-12748395,
           12749540-12749558,12749777-12749843,12749934-12749953,
           12750079-12750248,12751646-12751823
          Length = 199

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 85  RQWPGVHWSDQGTHSY 132
           R WPG+HWSD  T  Y
Sbjct: 51  RIWPGLHWSDSSTPLY 66


>04_04_1504 + 34035109-34035198,34035586-34036002,34038385-34039017
          Length = 379

 Score = 27.9 bits (59), Expect = 4.6
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +1

Query: 1   CFYLSGLVDNDFTTMQLHIRGQSDTRXGR 87
           CFY S L  NDF T+  H+  Q     GR
Sbjct: 101 CFYFSDLPSNDFNTL-FHLLPQQAAAAGR 128


>04_04_0076 +
           22558105-22558261,22558356-22558405,22559837-22560044,
           22560112-22560237,22560469-22560567,22560729-22561405,
           22561483-22561731,22561808-22561936,22562021-22562089,
           22562183-22562256,22563086-22563098,22563361-22563468,
           22563541-22563651,22563725-22563811,22564043-22564068,
           22564840-22564906,22565123-22565212,22565295-22565387,
           22565515-22565604,22565699-22565761,22566349-22566447
          Length = 894

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 38  QLCSCISEGNQTHVLDVNGQESIGQIKERIRTLAAVGDEXLT 163
           QLCS I E  Q H   V  ++++ + K +++   A  +  LT
Sbjct: 494 QLCSIIDEKEQLHTCAVEREKNLEEQKLQVQASLAATESQLT 535


>02_05_0021 -
           25101738-25101881,25119662-25120331,25122562-25123779,
           25123859-25124109
          Length = 760

 Score = 27.5 bits (58), Expect = 6.1
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = +2

Query: 53  ISEGNQTHVLDVNGQESIGQIKERIRTLAAVGDEXLTL 166
           I+E N+T V DVN QE  G +      L  V DE  T+
Sbjct: 618 IAEVNETSVKDVNAQEDGGVVAPVGIQLGGVADEGETV 655


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,618,387
Number of Sequences: 37544
Number of extensions: 196162
Number of successful extensions: 448
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 448
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1011709100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)