Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M14
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical pr... 177 6e-45
Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical p... 132 2e-31
Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical pr... 28 6.7
U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,... 28 6.7
L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorte... 28 6.7
Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical p... 27 8.8
Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical p... 27 8.8
AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical... 27 8.8
>L25599-6|AAA28051.1| 213|Caenorhabditis elegans Hypothetical
protein F54H12.6 protein.
Length = 213
Score = 177 bits (431), Expect = 6e-45
Identities = 91/177 (51%), Positives = 118/177 (66%), Gaps = 3/177 (1%)
Frame = +1
Query: 127 LAXKSYVSGYTPSQADVQVFEQVGKAP-AANLPHVLRWYNQIASYTPAERKTWSQ--GTS 297
LA +++ +G+ S D Q+F +G AP A+ P+V RWY +ASYT AERKTW+ G++
Sbjct: 18 LAEQAFATGFVLSGEDAQLFAALGSAPNASTYPNVARWYANVASYTDAERKTWASAGGSA 77
Query: 298 PLXXXXXXXXXXXXXXXXXXXXVDLFGSGDEEXDAQXERIREXRLKAYADXKSKKPALIA 477
P DLFGS DEE DA+ +I E RL AYA+ K+KK IA
Sbjct: 78 PAAAAADGDDF------------DLFGSDDEEEDAEKAKIVEERLAAYAEKKAKKAGPIA 125
Query: 478 KSSILLDVKPWDDETDMXEMENQVRTIEMEGLLWGASKLVPVGYGINKLQIMCVIED 648
KSS++LDVKPWDDETD+ EME VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED
Sbjct: 126 KSSVILDVKPWDDETDLGEMEKLVRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIED 182
>Z95559-20|CAB63360.2| 263|Caenorhabditis elegans Hypothetical
protein Y41E3.10a protein.
Length = 263
Score = 132 bits (320), Expect = 2e-31
Identities = 60/94 (63%), Positives = 75/94 (79%)
Frame = +1
Query: 367 DLFGSGDEEXDAQXERIREXRLKAYADXKSKKPALIAKSSILLDVKPWDDETDMXEMENQ 546
DLFGS DEE D + +++ E RL AYA K+ K IAKSS++LDVKPWDDETD+ EME
Sbjct: 139 DLFGSEDEEEDEEKKKVVEERLAAYAAKKATKAGPIAKSSVILDVKPWDDETDLGEMEKL 198
Query: 547 VRTIEMEGLLWGASKLVPVGYGINKLQIMCVIED 648
VR+IEM+GL+WG +KL+P+GYGI KLQI+ VIED
Sbjct: 199 VRSIEMDGLVWGGAKLIPIGYGIKKLQIITVIED 232
>Z71177-2|CAA94867.1| 425|Caenorhabditis elegans Hypothetical
protein AC3.3 protein.
Length = 425
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -2
Query: 268 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFXQ 131
QP CM + + VV+ PAP Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAPVQCVPQCQQQCQQQCVQTQPIQQ 171
>Z71177-9|CAA94868.2| 425|Caenorhabditis elegans Hypothetical
protein AC3.4 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -2
Query: 268 QPECMKQFDYTIVVRGEG*RPAPCQLAQILEHQLEKECIQTRSFXQ 131
QP CM + + VV+ PA Q + Q +++C+QT+ Q
Sbjct: 130 QPSCMPACEQSCVVQ----TPAAVQCVPQCQQQCQQQCVQTQPIQQ 171
>U42835-6|AAA83589.2| 816|Caenorhabditis elegans Dehydrogenases,
short chain protein27 protein.
Length = 816
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/42 (40%), Positives = 23/42 (54%)
Frame = +1
Query: 484 SILLDVKPWDDETDMXEMENQVRTIEMEGLLWGASKLVPVGY 609
SI+L VKP DDE + ++ NQ M G LW A++ Y
Sbjct: 436 SIMLCVKPADDEI-VQKIRNQ-----MSGALWSAAQFAVTSY 471
>L12018-10|AAA65466.2| 683|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 19 protein.
Length = 683
Score = 27.9 bits (59), Expect = 6.7
Identities = 23/77 (29%), Positives = 37/77 (48%)
Frame = -3
Query: 498 IKENRGLGNEGWFLRLXVSICFQTXFSNSFXLCILFLVTRTK*INVVVIVVFRCWGGSRG 319
++ G+GN +F V I T S+ F L +L V+ + + ++ C+ + G
Sbjct: 153 VESCEGIGNPHYFYITGVFIVAGTVASSIFYLGVL--VSDSIFGGFLSVL---CFAFNHG 207
Query: 318 FSTGGQWAGALRPSFAF 268
+T QW LR SFAF
Sbjct: 208 EATRVQWTPPLRESFAF 224
>Z81475-11|CAB03915.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 223 HVLRWYNQIASYTPAERKTWSQGTSP 300
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
>Z81127-9|CAB03394.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 585 LQTCACWVWHK*TANYVCH 641
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>Z81056-11|CAB02911.3| 735|Caenorhabditis elegans Hypothetical
protein F09F3.9 protein.
Length = 735
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 585 LQTCACWVWHK*TANYVCH 641
LQ CA W+WHK NY+ +
Sbjct: 187 LQRCA-WLWHKLNENYITY 204
>AL032627-23|CAA21551.1| 1820|Caenorhabditis elegans Hypothetical
protein C24H11.7 protein.
Length = 1820
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 223 HVLRWYNQIASYTPAERKTWSQGTSP 300
H+L +Q+ S TPA W+QG SP
Sbjct: 1524 HLLDLCSQLHSQTPAIFAKWAQGASP 1549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,510,799
Number of Sequences: 27780
Number of extensions: 251935
Number of successful extensions: 645
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 643
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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