Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M14
(653 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 6.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.9
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 7.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.9
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 292 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLHYNINYIEQI 344
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 59 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 59 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 59 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 59 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 111
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = -3
Query: 90 LTSPTAIVSFSVATFF*ITTRLGEKMS 10
L PT ++SF F + GEK++
Sbjct: 240 LILPTVLISFLCVLVFYLPAEAGEKVT 266
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 292 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 292 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 292 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 344
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +1
Query: 37 YLEKSCYTKRNYGCRRR*NRPGLSMT*TNYLAXKSYVSGYTPSQADVQVFEQV 195
Y E S RN R + P + + +N +Y + Y P ++ EQ+
Sbjct: 281 YGETSKERSRNRTEREKSKEPKIISSLSNNYNYNNYNNNYKPLYYNINYIEQI 333
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,066
Number of Sequences: 438
Number of extensions: 2962
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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