Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M12
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 313 8e-86
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 313 8e-86
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 189 5e-65
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 242 1e-64
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 181 5e-46
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 181 5e-46
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 169 1e-42
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 86 2e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 86 2e-17
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 84 7e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 79 4e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 79 4e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 79 4e-15
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 52 5e-07
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 41 7e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 40 0.002
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 40 0.002
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 36 0.025
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.18
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 33 0.23
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 33 0.23
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 31 0.71
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 31 0.71
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 31 0.94
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 31 0.94
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 30 1.6
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 1.6
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 2.2
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 2.2
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 2.2
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 2.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 28 5.0
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 28 5.0
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 313 bits (768), Expect = 8e-86
Identities = 148/171 (86%), Positives = 153/171 (89%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+V GTGEFE GIS NGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 499 KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIKKIGYNPAAVAFVPISGW 651
KQLIV NKMDSTEPP+SE F EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 313 bits (768), Expect = 8e-86
Identities = 148/171 (86%), Positives = 153/171 (89%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+V GTGEFE GIS NGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 499 KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIKKIGYNPAAVAFVPISGW 651
KQLIV NKMDSTEPP+SE F EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 146 KQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 196
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 189 bits (460), Expect(2) = 5e-65
Identities = 86/91 (94%), Positives = 88/91 (96%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+V
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVV 116
Score = 77.0 bits (181), Expect(2) = 5e-65
Identities = 35/49 (71%), Positives = 39/49 (79%)
Frame = +1
Query: 505 LIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIKKIGYNPAAVAFVPISGW 651
L+V NKMDSTEPP+SE F EI EVS +IKKIGYNP AV FVPISG+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGF 162
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 242 bits (593), Expect = 1e-64
Identities = 113/124 (91%), Positives = 116/124 (93%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVLDKLKAERERGITIDIALWKFET KY
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAKY 85
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
Y+TIIDAPGHRDFIKNMITGTSQADCAVL+V GTGEFE GIS NGQTREHALLA TLGV
Sbjct: 86 YITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGV 145
Query: 499 KQLI 510
KQL+
Sbjct: 146 KQLV 149
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 181 bits (440), Expect = 5e-46
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HL++ +D RTI KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET
Sbjct: 189 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 248
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 249 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 308
Query: 499 KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYI-KKIGYNPAAVAFVPISGW 651
QLIV VNK+D+ + +S+ F+EI +S ++ ++ G++ FVP+SG+
Sbjct: 309 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 356
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 72 EKTHINIVVIGHVDSGKSTTTGSL 143
+K IN++V+GHVD+GKST G L
Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHL 190
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 181 bits (440), Expect = 5e-46
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 318
HL++ +D RTI KF+ EA GK SF YAWVLD+ + ERERG+T+DI FET
Sbjct: 207 HLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERERGVTMDIGRTSFETSHR 266
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
+ ++DAPGH+DFI NMITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV
Sbjct: 267 RIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGV 326
Query: 499 KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYI-KKIGYNPAAVAFVPISGW 651
QLIV VNK+D+ + +S+ F+EI +S ++ ++ G++ FVP+SG+
Sbjct: 327 TQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAGFSKP--KFVPVSGF 374
Score = 35.1 bits (77), Expect = 0.044
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 72 EKTHINIVVIGHVDSGKSTTTGSL 143
+K IN++V+GHVD+GKST G L
Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHL 208
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 169 bits (412), Expect = 1e-42
Identities = 77/170 (45%), Positives = 114/170 (67%), Gaps = 1/170 (0%)
Frame = +1
Query: 142 LIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYY 321
L++ G +DKRT+ K+E+EA E G+ S+ +W +D ERE+G T+++ FET K +
Sbjct: 129 LMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEEREKGKTVEVGRAYFETEKRH 188
Query: 322 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVK 501
TI+DAPGH+ F+ NMI G +QAD AVL++ A GEFE G GQTREH++L T GVK
Sbjct: 189 FTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVK 248
Query: 502 QLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIKKIGYNPAA-VAFVPISG 648
L++ VNKMD + E F+EI +++ +++K+G+NP + +VP SG
Sbjct: 249 HLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKLGFNPKTDITYVPCSG 298
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = +3
Query: 66 GKEKTHINIVVIGHVDSGKSTTTGSL 143
G K HIN+V +GHVD+GKST G L
Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQL 129
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 85.8 bits (203), Expect = 2e-17
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++ A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 421 TGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIK 600
G E QT+EH +LA +GVK + + +NK D E E + + E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 601 KIGYNPAAVAFV 636
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 75 KTHINIVVIGHVDSGKSTTTGSL 143
K ++N+ IGH+D GK+T T ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAI 65
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 85.8 bits (203), Expect = 2e-17
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+DK K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++ A
Sbjct: 83 IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAAT 142
Query: 421 TGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIK 600
G E QT+EH +LA +GVK + + +NK D E E + + E +
Sbjct: 143 DGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----EDDLDLVEMEARELLS 191
Query: 601 KIGYNPAAVAFV 636
G+N A +
Sbjct: 192 LHGFNGDATPVI 203
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 75 KTHINIVVIGHVDSGKSTTTGSL 143
K ++N+ IGH+D GK+T T ++
Sbjct: 43 KINVNVGTIGHIDHGKTTLTSAI 65
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 84.2 bits (199), Expect = 7e-17
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +1
Query: 139 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAER 264
HLIYKCGGIDKRTI KFEKEA EMGKGSFKYAWVLDKLK +
Sbjct: 26 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
Score = 55.2 bits (127), Expect = 4e-08
Identities = 25/27 (92%), Positives = 25/27 (92%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
MGKEK HINIVVIGHVDSGKSTTTG L
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHL 27
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 87 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 146
Query: 421 TGEFEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E E + ++
Sbjct: 147 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 196
Query: 595 IKKIGY 612
+ + GY
Sbjct: 197 LNEFGY 202
Score = 34.3 bits (75), Expect = 0.077
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTTGSL 143
++K H+N+ IGHVD GK+T T ++
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAI 69
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 421 TGEFEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E E + ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 595 IKKIGY 612
+ + GY
Sbjct: 198 LNEFGY 203
Score = 34.3 bits (75), Expect = 0.077
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTTGSL 143
++K H+N+ IGHVD GK+T T ++
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAI 70
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/126 (38%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+D E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+V A
Sbjct: 88 IDNAPEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAAT 147
Query: 421 TGEFEXGISXNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPXFEEIXKEVSSY 594
G QTREH LLA +GV ++V +NK+D E P +E E + ++
Sbjct: 148 DGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQ 197
Query: 595 IKKIGY 612
+ + GY
Sbjct: 198 LNEFGY 203
Score = 34.3 bits (75), Expect = 0.077
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +3
Query: 69 KEKTHINIVVIGHVDSGKSTTTGSL 143
++K H+N+ IGHVD GK+T T ++
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAI 70
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 51.6 bits (118), Expect = 5e-07
Identities = 34/98 (34%), Positives = 48/98 (48%)
Frame = +1
Query: 238 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 417
+LDKL+ ERERGIT+ Y + +ID PGH DF + + D +L+V A
Sbjct: 76 MLDKLQVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAA 135
Query: 418 GTGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMD 531
G QT + LAF + Q+I +NK+D
Sbjct: 136 NQG-------VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 41.1 bits (92), Expect = 7e-04
Identities = 37/108 (34%), Positives = 46/108 (42%), Gaps = 1/108 (0%)
Frame = +1
Query: 211 GKGSFKYAWVLDKLKAERERGITIDIALWKFETXK-YYVTIIDAPGHRDFIKNMITGTSQ 387
GK + A ++ A GIT I + E K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 388 ADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMD 531
AD VL+V A G E QT + A V QL+V VNK+D
Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 39.9 bits (89), Expect = 0.002
Identities = 32/97 (32%), Positives = 43/97 (44%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAG 420
+D + ER+RGITI A + + IID PGH DF + D AVL++ G
Sbjct: 87 MDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CG 145
Query: 421 TGEFEXGISXNGQTREHALLAFTLGVKQLIVGVNKMD 531
G G+ T L + + I VNKMD
Sbjct: 146 VG----GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/63 (33%), Positives = 30/63 (47%)
Frame = +1
Query: 238 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 417
V D L ERERGIT+ A + + + +ID PGH DF + D V+++
Sbjct: 64 VTDFLDIERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDG 123
Query: 418 GTG 426
G
Sbjct: 124 SAG 126
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/96 (28%), Positives = 45/96 (46%)
Frame = +1
Query: 322 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVK 501
+ +ID PGH I+ ++ ++ D A++I+ G QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVIIDVVAG-------IQPQTAEHLLLASKFCPN 126
Query: 502 QLIVGVNKMDSTEPPYSEPXFEEIXKEVSSYIKKIG 609
++I+ +NK D E + E K+V +K +G
Sbjct: 127 RVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 84 INIVVIGHVDSGKSTTT 134
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 35.9 bits (79), Expect = 0.025
Identities = 23/85 (27%), Positives = 39/85 (45%)
Frame = +1
Query: 319 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGV 498
+V+ +D PGH + M+ G + D A L+V AG QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLV-AGNEP-----CPQPQTSEHLAAVEIMQL 181
Query: 499 KQLIVGVNKMDSTEPPYSEPXFEEI 573
L++ NK+D + + +E+I
Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +1
Query: 241 LDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 411
+D + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 58 MDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 244 DKLKAERERGITI-----DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 408
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
Query: 409 VXAGTG 426
V A G
Sbjct: 232 VDAHEG 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 32.7 bits (71), Expect = 0.23
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +1
Query: 244 DKLKAERERGITI-----DIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 408
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
Query: 409 VXAGTG 426
V A G
Sbjct: 107 VDAHEG 112
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 39 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGSL 143
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 31.1 bits (67), Expect = 0.71
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +3
Query: 39 FVIRD*PKMGKEKTHINIVVIGHVDSGKSTTTGSL 143
++IRD P K+ + V+G+VD+GKST G L
Sbjct: 127 WIIRD-PPTEKDFIEARVAVVGNVDAGKSTLLGVL 160
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 30.7 bits (66), Expect = 0.94
Identities = 24/77 (31%), Positives = 34/77 (44%)
Frame = +1
Query: 328 IIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEXGISXNGQTREHALLAFTLGVKQL 507
IID PGH F G+S D A+L+V + G+ QT E +L G
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604
Query: 508 IVGVNKMDSTEPPYSEP 558
++ +NK+D S P
Sbjct: 605 VIALNKIDRLYEYESNP 621
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 524 LFTPTMSCLTPRVKASKACSRV*PXLEIPXSNSPVPAXTMSTA 396
LF PT+SC+ + AS S P + P +N VP T+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAP-ANDDVPEATLSVS 54
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
M +++ N+ VI HVD GKST T SL
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 277 TIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 426
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 63 MGKEKTHINIVVIGHVDSGKSTTTGSL 143
M +++ N+ VI HVD GKST T SL
Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSL 39
Score = 29.9 bits (64), Expect = 1.6
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 277 TIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 426
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.2
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 587 PHTSRRLATTQLLSLSCPFLD 649
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 84 INIVVIGHVDSGKSTTT 134
+N+ ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 166 DKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
+KR + EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 166 DKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERE 267
+KR + EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,464,675
Number of Sequences: 27780
Number of extensions: 248913
Number of successful extensions: 660
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 653
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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