Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M06
         (631 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1; B...    50   3e-05
UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,...    45   0.002
UniRef50_Q1ZXL5 Cluster: Putative uncharacterized protein; n=2; ...    35   1.9  
UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating...    33   5.7  
UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine liga...    33   5.7  
UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4...    33   5.7  
UniRef50_P74745 Cluster: Serine/threonine-protein kinase C; n=1;...    33   7.5  
UniRef50_Q9ULL0 Cluster: Uncharacterized protein KIAA1210; n=5; ...    33   7.5  
UniRef50_Q8IKD2 Cluster: Putative uncharacterized protein; n=3; ...    32   9.9  

>UniRef50_Q9GPH3 Cluster: Activating transcription factor; n=1;
           Bombyx mori|Rep: Activating transcription factor -
           Bombyx mori (Silk moth)
          Length = 236

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 24/24 (100%), Positives = 24/24 (100%)
 Frame = +2

Query: 560 AVLASSPFVTSQPTEELLREFETV 631
           AVLASSPFVTSQPTEELLREFETV
Sbjct: 18  AVLASSPFVTSQPTEELLREFETV 41


>UniRef50_UPI0000DB747D Cluster: PREDICTED: similar to CG8669-PA,
           isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar
           to CG8669-PA, isoform A - Apis mellifera
          Length = 357

 Score = 44.8 bits (101), Expect = 0.002
 Identities = 28/69 (40%), Positives = 39/69 (56%)
 Frame = +2

Query: 425 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTE 604
           LL++LD   K+E  FS+WLEEK++LP IFE +           P   +  +P      T+
Sbjct: 64  LLEKLDEWIKEEP-FSDWLEEKIELP-IFEELPITENGQIKTTPYNEITKAP--QQDDTQ 119

Query: 605 ELLREFETV 631
            LL+EFETV
Sbjct: 120 TLLQEFETV 128


>UniRef50_Q1ZXL5 Cluster: Putative uncharacterized protein; n=2;
           Dictyostelium discoideum|Rep: Putative uncharacterized
           protein - Dictyostelium discoideum AX4
          Length = 392

 Score = 34.7 bits (76), Expect = 1.9
 Identities = 21/60 (35%), Positives = 30/60 (50%)
 Frame = +2

Query: 425 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTE 604
           L QQL+ Q  +EN      EE  +L  I   I ++P +  PQP   V+ + P  T QP +
Sbjct: 242 LQQQLERQQNEEN-----QEEFDELVPILNEIPDIPVQTQPQPSIPVVKTKPPQTEQPPQ 296


>UniRef50_UPI00015B4E9A Cluster: PREDICTED: similar to activating
           transcription factor; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to activating transcription factor -
           Nasonia vitripennis
          Length = 434

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 16/29 (55%), Positives = 23/29 (79%)
 Frame = +2

Query: 434 QLDSQCKQENIFSNWLEEKVDLPSIFENI 520
           +L S  K+E+ F++WLEEK+DLP IFE +
Sbjct: 69  ELKSWIKEES-FADWLEEKIDLP-IFEEL 95


>UniRef50_UPI0000D9D19D Cluster: PREDICTED: tubulin tyrosine
           ligase-like family, member 4 isoform 2; n=2;
           Catarrhini|Rep: PREDICTED: tubulin tyrosine ligase-like
           family, member 4 isoform 2 - Macaca mulatta
          Length = 970

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +2

Query: 200 TMSASXKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 331
           T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 757 TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 800


>UniRef50_Q14679 Cluster: Tubulin--tyrosine ligase-like protein 4;
            n=26; Eumetazoa|Rep: Tubulin--tyrosine ligase-like
            protein 4 - Homo sapiens (Human)
          Length = 1199

 Score = 33.1 bits (72), Expect = 5.7
 Identities = 15/44 (34%), Positives = 27/44 (61%)
 Frame = +2

Query: 200  TMSASXKESWAAAIDLLTNDECRLLLEVEDFFNDDCDLLKNFPS 331
            T     ++ +A+ +D+LT D+ R+L+E+ED F+      + FPS
Sbjct: 986  TQKIPDQDFYASVLDVLTPDDVRILVEMEDEFSRRGQFERIFPS 1029


>UniRef50_P74745 Cluster: Serine/threonine-protein kinase C; n=1;
           Synechocystis sp. PCC 6803|Rep: Serine/threonine-protein
           kinase C - Synechocystis sp. (strain PCC 6803)
          Length = 535

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +2

Query: 500 PSIFENISEVPERVDPQP-PAAVLASSPFVTSQPTEELLREFE 625
           P++FE  S +P    P P P    + SP  TS PTE+ +   E
Sbjct: 395 PNLFETPSPIPTPATPSPEPTPSPSPSPETTSSPTEDTITPME 437


>UniRef50_Q9ULL0 Cluster: Uncharacterized protein KIAA1210; n=5;
           Amniota|Rep: Uncharacterized protein KIAA1210 - Homo
           sapiens (Human)
          Length = 1093

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 15/46 (32%), Positives = 28/46 (60%)
 Frame = +2

Query: 419 NDLLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQPP 556
           ND +QQL S+C  + I +  ++++V   S+  +I +  + V+P PP
Sbjct: 287 NDFMQQLPSRCPSQPIMNPTVQQQVPTSSVGTSIKQ-SDSVEPIPP 331


>UniRef50_Q8IKD2 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 532

 Score = 32.3 bits (70), Expect = 9.9
 Identities = 11/32 (34%), Positives = 20/32 (62%)
 Frame = +2

Query: 419 NDLLQQLDSQCKQENIFSNWLEEKVDLPSIFE 514
           N + Q  ++ C  +N  S W+E + D+P++FE
Sbjct: 330 NKINQDDNNTCSDKNTSSEWIENEEDIPNVFE 361


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 579,065,158
Number of Sequences: 1657284
Number of extensions: 10638054
Number of successful extensions: 29434
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 28555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29425
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)