Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M06
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       23   2.8  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   2.8  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.8  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    23   2.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.8  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.7  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    22   4.9  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   4.9  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +1

Query: 124 SQNTNIIRTSIPLALLFAFVELNH 195
           SQN+N +  +IP +L+   V+ +H
Sbjct: 114 SQNSNDVCLAIPESLVIKLVDYHH 137


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 IITTMSASXKESWAAAIDLLTNDECR 268
           ++ + S++   + AAA+D  T+  CR
Sbjct: 27  MVPSFSSTASSALAAAVDAATDKSCR 52


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 IITTMSASXKESWAAAIDLLTNDECR 268
           ++ + S++   + AAA+D  T+  CR
Sbjct: 86  MVPSFSSTASSALAAAVDAATDKSCR 111


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 IITTMSASXKESWAAAIDLLTNDECR 268
           ++ + S++   + AAA+D  T+  CR
Sbjct: 27  MVPSFSSTASSALAAAVDAATDKSCR 52


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 8/26 (30%), Positives = 16/26 (61%)
 Frame = +2

Query: 191 IITTMSASXKESWAAAIDLLTNDECR 268
           ++ + S++   + AAA+D  T+  CR
Sbjct: 86  MVPSFSSTASSALAAAVDAATDKSCR 111


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
 Frame = +2

Query: 104 QDKLVH----LHKTPTSLEHQSLWHFYSHS 181
           Q+KL+     LHK    L+H  +W  Y  +
Sbjct: 101 QNKLIEVISKLHKLDNKLKHMLIWKSYKRT 130


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 444 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 542
           + AN+  F  TG    L  L  +K + KF+  W
Sbjct: 84  LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +3

Query: 444 VNANKRIFSPTG*RKKLTSLRSSKTFLKFLNAW 542
           + AN+  F  TG    L  L  +K + KF+  W
Sbjct: 84  LEANRLFFFLTGVMASLLFLNLAKRWPKFVKDW 116


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,174
Number of Sequences: 336
Number of extensions: 2660
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)