Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M06
         (631 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0307 - 2604863-2604931,2605177-2606136                           31   0.57 
05_03_0373 - 13194723-13195847,13196219-13196809                       30   1.7  
02_04_0311 + 21936812-21937861                                         29   2.3  
04_04_0057 + 22410167-22411330                                         29   3.0  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   5.3  
07_01_0551 - 4105721-4105774,4106090-4106159,4106880-4106945,410...    28   7.0  
01_06_0751 + 31690411-31690443,31692900-31694240                       28   7.0  
01_03_0163 + 13346586-13347809                                         28   7.0  
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120...    27   9.3  

>08_01_0307 - 2604863-2604931,2605177-2606136
          Length = 342

 Score = 31.5 bits (68), Expect = 0.57
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +2

Query: 53  ACAFTHNXKMLAKMAPSQDKLVHLHKTPTSLEHQSLWHFYSHS 181
           AC F H    ++   P++D+LV +H  P    + S+W   SH+
Sbjct: 202 ACPFDHPVITMSLSPPAKDELVLMHGWPPHRVNSSVWGNASHN 244


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 421 VSEFGGTWFQLRR*WRVETRSVIDFDXRCSAR 326
           V+E G  + QL+R WR + R ++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>02_04_0311 + 21936812-21937861
          Length = 349

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/44 (36%), Positives = 20/44 (45%)
 Frame = +2

Query: 476 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEE 607
           WLE  V  P    N+ + P    P PPA   +SSP   +   EE
Sbjct: 154 WLEGHVTCPLCRANLEKQPA---PSPPAVEFSSSPAAAAAAAEE 194


>04_04_0057 + 22410167-22411330
          Length = 387

 Score = 29.1 bits (62), Expect = 3.0
 Identities = 13/35 (37%), Positives = 17/35 (48%)
 Frame = +2

Query: 476 WLEEKVDLPSIFENISEVPERVDPQPPAAVLASSP 580
           WLE +V  P    N+ + P    P P AA  + SP
Sbjct: 164 WLESRVTCPLCRANLEKPPPPPPPPPAAAAASPSP 198


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +2

Query: 425 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 544
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


>07_01_0551 -
           4105721-4105774,4106090-4106159,4106880-4106945,
           4106985-4107479,4107491-4107672,4107728-4108222
          Length = 453

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +1

Query: 4   SFCXHAGFLVSNRLHTSVCLHAQXXNACQNGALTGQISPSS 126
           S C   G+L S R ++ VC HA      Q    TG  SP+S
Sbjct: 323 SLCVSPGWLPSIRGNSIVCFHAGENYLAQYHLGTGSWSPAS 363


>01_06_0751 + 31690411-31690443,31692900-31694240
          Length = 457

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +2

Query: 518 ISEVPERVD-PQPPAAVLASSPFVTSQPT 601
           I E+P+R + P PPAA     P  T Q T
Sbjct: 195 IDELPDRAEAPPPPAAASTEQPEATEQAT 223


>01_03_0163 + 13346586-13347809
          Length = 407

 Score = 27.9 bits (59), Expect = 7.0
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 224 SWAAAIDLLTNDECRLLLEVED 289
           SW AA+D +T DE R LLE  D
Sbjct: 115 SWDAALDGITADEARALLESID 136


>07_01_0172 -
           1201595-1201912,1202637-1202723,1202836-1202895,
           1203007-1203106,1203227-1203633,1204728-1204883,
           1204981-1205106,1205503-1205572,1205679-1205767
          Length = 470

 Score = 27.5 bits (58), Expect = 9.3
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 542 DPQPPAAVLAS--SPFVTSQPTEELLREFETV 631
           DP  PA V  S  SP +  QP  EL+RE  T+
Sbjct: 78  DPDHPAPVNLSLESPMLKVQPANELIREVATL 109


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,984,268
Number of Sequences: 37544
Number of extensions: 301584
Number of successful extensions: 851
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)