Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M06
(631 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p pro... 29 5.2
AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-P... 29 5.2
AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymera... 29 5.2
AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p pro... 29 6.9
AL021728-3|CAA16820.1| 1042|Drosophila melanogaster EG:95B7.8,FB... 29 6.9
AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB prot... 29 6.9
AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA ... 29 6.9
AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-P... 29 6.9
AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-P... 29 6.9
>AY061331-1|AAL28879.1| 403|Drosophila melanogaster LD25702p
protein.
Length = 403
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 488 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 616
++DLP + E + ++ D PP A++ PF S LR
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213
>AE014296-1025|AAF50735.1| 525|Drosophila melanogaster CG10489-PA
protein.
Length = 525
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 488 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 616
++DLP + E + ++ D PP A++ PF S LR
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 335
>AB102715-1|BAD10843.1| 403|Drosophila melanogaster DNA polymerase
epsilon secondsubunit protein.
Length = 403
Score = 29.1 bits (62), Expect = 5.2
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 488 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLR 616
++DLP + E + ++ D PP A++ PF S LR
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELR 213
>AY069653-1|AAL39798.1| 713|Drosophila melanogaster LD42374p
protein.
Length = 713
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 588 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 466
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AL021728-3|CAA16820.1| 1042|Drosophila melanogaster
EG:95B7.8,FBgn0000928;fs(1)Yb protein.
Length = 1042
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 452 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 619
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 620 FE 625
F+
Sbjct: 280 FQ 281
>AF141673-1|AAD32687.1| 1042|Drosophila melanogaster fs(1)YB
protein.
Length = 1042
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 452 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 619
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 620 FE 625
F+
Sbjct: 280 FQ 281
>AE014298-454|AAF45815.1| 1042|Drosophila melanogaster CG2706-PA
protein.
Length = 1042
Score = 28.7 bits (61), Expect = 6.9
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Frame = +2
Query: 452 KQENIFSNWLEEKVDLPSIFENISEVPERVDPQPPAAVLAS----SPFVTSQPTEELLRE 619
K++ I + + V L + FE S VD PAA + SPFVT PT+ L E
Sbjct: 220 KEQEINLSVEDATVKLLASFELGSTDSAAVDESSPAAAKFNAPVYSPFVTENPTKSLDAE 279
Query: 620 FE 625
F+
Sbjct: 280 FQ 281
>AE013599-1154|AAF58768.1| 713|Drosophila melanogaster CG11883-PB,
isoform B protein.
Length = 713
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 588 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 466
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
>AE013599-1153|AAF58767.1| 732|Drosophila melanogaster CG11883-PA,
isoform A protein.
Length = 732
Score = 28.7 bits (61), Expect = 6.9
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = -2
Query: 588 VTKGLEARTAAGGCGSTRSGTSEMFSKIEGRSTFSSNQLEK 466
V++ R GCGS SG+ + + GRST S+QLEK
Sbjct: 83 VSQPQSPRHRGSGCGSV-SGSRIITHGLTGRSTSISSQLEK 122
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,689,477
Number of Sequences: 53049
Number of extensions: 518291
Number of successful extensions: 1519
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1519
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2621070450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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