Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_M06
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 3.6
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 29 3.6
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 29 3.6
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 29 3.6
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 29 3.6
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 29 3.6
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 3.6
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 28 4.8
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical pr... 27 8.4
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 27 8.4
AC025723-12|AAK29938.1| 215|Caenorhabditis elegans Hypothetical... 27 8.4
>Z93398-9|CAN99698.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>Z92788-9|CAN99699.1| 1497|Caenorhabditis elegans Hypothetical
protein ZK1151.1i protein.
Length = 1497
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 552 EKLDL--ILKRIEDVEARVDTSPPAAV 576
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical
protein ZK1151.1h protein.
Length = 3424
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical
protein ZK1151.1a protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical
protein ZK1151.1f protein.
Length = 3322
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical
protein ZK1151.1e protein.
Length = 3323
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 312 EKLDL--ILKRIEDVEARVDTSPPAAV 336
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical
protein ZK1151.1d protein.
Length = 3405
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 394 EKLDL--ILKRIEDVEARVDTSPPAAV 418
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +2
Query: 485 EKVDLPSIFENISEVPERVDPQPPAAV 565
EK+DL I + I +V RVD PPAAV
Sbjct: 425 EKLDL--ILKRIEDVEARVDTSPPAAV 449
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +2
Query: 419 NDLLQQLDSQCKQENIFSNWLEEKVDLPS 505
N +Q++D+ C +NI + K+D+P+
Sbjct: 103 NHWMQEVDTYCTNDNIIKMMVANKIDMPN 131
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 428 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 550
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
>Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical
protein R11.3 protein.
Length = 528
Score = 27.5 bits (58), Expect = 8.4
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 617 PAAVLQWAARSQKDLKLEPLPGVVGPRVQELQ--KCFRRSKGGQLFPLTSWRK 465
PA L WA RSQ + + P V P V + Q K +R+ KG L W +
Sbjct: 405 PAMKLAWALRSQLESEQAP-AAVFDPMVVDKQQRKKYRKKKGTNLDYKMIWEE 456
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +2
Query: 428 LQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVDPQ 550
+ Q++SQ E SN+ E++ P +N+S+ ++ PQ
Sbjct: 593 VSQVNSQADFEAFLSNYPEQRQAAPQNTQNVSQKTQQTRPQ 633
>AC025723-12|AAK29938.1| 215|Caenorhabditis elegans Hypothetical
protein Y54F10AM.1 protein.
Length = 215
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 77 KMLAKMAPSQD-KLVHLHKTPTSLEHQSLWHFYSHSWN*IITTMSASXKESWAAAI 241
K+ + P + L+H H +EH+ LWH HS + ++ T + K S+ I
Sbjct: 160 KVFTNLLPHVELPLLHHHDC---VEHELLWHREVHSSHCLVRTAGGAEKSSFTLKI 212
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,435,114
Number of Sequences: 27780
Number of extensions: 256714
Number of successful extensions: 781
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 781
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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