Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M03
         (653 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   3.8  
AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory recept...    22   3.8  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    22   5.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   6.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.9  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 517 WHCTLLRKQVLLQ 479
           W CTLL+K  LL+
Sbjct: 93  WICTLLKKDKLLE 105


>AM292324-1|CAL23136.1|  398|Tribolium castaneum gustatory receptor
           candidate 3 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -2

Query: 517 WHCTLLRKQVLLQ 479
           W CTLL+K  LL+
Sbjct: 111 WICTLLKKDKLLE 123


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 92  TQNNYLQPSFTNIPR*NNKTLQRERPA 12
           TQN    PS+    R NN+  +R R A
Sbjct: 129 TQNKNDDPSYWEKRRKNNEAAKRSRDA 155


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = -1

Query: 227 YHSQWQRLVG 198
           +H QW+R VG
Sbjct: 710 FHGQWERTVG 719


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/24 (33%), Positives = 9/24 (37%)
 Frame = +3

Query: 459 CSPKGSGCSKTCLRSSVQCHHCHC 530
           C+ K     KTC      C H  C
Sbjct: 130 CNCKNGWKGKTCSLKDSHCDHTTC 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,676
Number of Sequences: 336
Number of extensions: 1992
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)