Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M03
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0350 + 16899076-16900164                                         29   2.4  
03_01_0343 - 2699518-2700114                                           29   3.2  
04_04_1363 - 32898345-32898371,32898986-32899837,32900234-329005...    28   5.6  
10_05_0013 + 7986281-7986434,7986664-7986743,7987583-7987656,798...    28   7.5  
06_01_0007 + 130582-131544,132187-132264,132615-132732,133228-13...    28   7.5  
03_04_0174 - 18044516-18046327                                         28   7.5  
01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918     28   7.5  

>09_04_0350 + 16899076-16900164
          Length = 362

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -1

Query: 224 HSQWQRLVGCRKWRQWQRALRRTRFDHHMQH 132
           H +W++  GC +WR+   A+   R   H +H
Sbjct: 252 HGEWRQRSGCWQWRRLTEAVAGGRDSSHRRH 282


>03_01_0343 - 2699518-2700114
          Length = 198

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +3

Query: 420 HLRHMHRXTYSXRCSPKGSGCSKTCLRSSVQCHHCHCFLPHT 545
           H RH HR   S R  P  +G +    R  V C++ H +L ++
Sbjct: 50  HRRHRHRAMPSRR--PTATGTTSMVSRDDVDCYNQHRYLEYS 89


>04_04_1363 -
           32898345-32898371,32898986-32899837,32900234-32900500,
           32900723-32901025,32902329-32902433,32903361-32903548,
           32903628-32903721
          Length = 611

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +3

Query: 498 RSSVQCHHCHCFLPHTGIHSHPGTDTXTNRQDGVANSYGIST 623
           R + + HH HC     G  +  GT T  N++ G  N  G S+
Sbjct: 394 RDAHEEHHDHCHAQSQGSSNVAGTMTGKNQEQGNENPDGCSS 435


>10_05_0013 +
           7986281-7986434,7986664-7986743,7987583-7987656,
           7988186-7988252
          Length = 124

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/15 (66%), Positives = 11/15 (73%)
 Frame = -2

Query: 397 RCIICRLWLWGCRCR 353
           RCI  R +LW CRCR
Sbjct: 27  RCIPRRAYLWWCRCR 41


>06_01_0007 +
           130582-131544,132187-132264,132615-132732,133228-133271,
           133389-133448,133536-133588,133671-133837,133963-134167,
           134989-135046,135225-135281,135363-135608,135938-136002,
           136090-136158,136238-136331,136467-136607,137159-137304,
           137452-138110,138222-138335,138406-138560
          Length = 1163

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 507 VQCHHCHCFLPHTGIHSHPGTDTXTNRQDGVANSYGIS 620
           + C+HC+  +  +   +H G  T     D +  S G+S
Sbjct: 413 IYCNHCNRVVSPSAFEAHAGEGTRRKPYDNIFTSNGVS 450


>03_04_0174 - 18044516-18046327
          Length = 603

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 17/55 (30%), Positives = 21/55 (38%)
 Frame = +3

Query: 420 HLRHMHRXTYSXRCSPKGSGCSKTCLRSSVQCHHCHCFLPHTGIHSHPGTDTXTN 584
           H  H H  + S    P  S  S     SS   HH H    +   HSH   ++ TN
Sbjct: 13  HHHHQHAASPSPPDQPHKSYPSSRGSTSSPSSHHTHNHTYYHHSHSHYNNNSNTN 67


>01_06_1281 - 35966121-35966392,35966406-35966574,35966607-35966918
          Length = 250

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 218 QWQRLVGCRKWRQWQRALRRTR 153
           +W R+ G R+W +W+R+ R  R
Sbjct: 144 RWSRMAGRRRWLKWRRSGRCQR 165


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,789,286
Number of Sequences: 37544
Number of extensions: 219296
Number of successful extensions: 710
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 710
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)