Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M03
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical p...    30   1.6  
AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effe...    30   1.6  
AF025458-5|AAB70974.1|  298|Caenorhabditis elegans Squat protein...    29   3.8  
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    28   6.7  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    27   8.8  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z83120-9|CAB05589.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRC-IICRLWLWGCRCRVG 347
           C  R  GVC + C+C I C     GC C  G
Sbjct: 544 CACRENGVCSYMCKCDINCSQRFPGCNCAAG 574


>Z81515-11|CAB04199.2|  773|Caenorhabditis elegans Hypothetical
           protein R06A4.7 protein.
          Length = 773

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRC-IICRLWLWGCRCRVG 347
           C  R  GVC + C+C I C     GC C  G
Sbjct: 544 CACRENGVCSYMCKCDINCSQRFPGCNCAAG 574


>AF011893-1|AAC27124.1|  773|Caenorhabditis elegans maternal-effect
           sterile 2 protein.
          Length = 773

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRC-IICRLWLWGCRCRVG 347
           C  R  GVC + C+C I C     GC C  G
Sbjct: 544 CACRENGVCSYMCKCDINCSQRFPGCNCAAG 574


>AF025458-5|AAB70974.1|  298|Caenorhabditis elegans Squat protein 2
           protein.
          Length = 298

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 20/66 (30%), Positives = 22/66 (33%)
 Frame = +3

Query: 417 PHLRHMHRXTYSXRCSPKGSGCSKTCLRSSVQCHHCHCFLPHTGIHSHPGTDTXTNRQDG 596
           PHL H  +  YS    P   G       S      C C     G    PG D     QDG
Sbjct: 70  PHLFHRQKRQYSSPNPPAAGGYGAPVTNSEPAPTCCSCQQGPAGPPGPPG-DDGNGGQDG 128

Query: 597 VANSYG 614
           V  + G
Sbjct: 129 VRGNDG 134


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
 Frame = -2

Query: 436 CI*RRCGVCRFSC----RCIICRLWLWGCRCRVGSSC 338
           C  RRC  C  +C     C  CR    GC C  G  C
Sbjct: 95  CCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGCGCGC 131


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRCIICRLWLWGCRCRVGSSC 338
           C  RRC  C  +C C  C      C C  G  C
Sbjct: 93  CCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGC 125


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRCIICRLWLWGCRCRVGSSC 338
           C  RRC  C  +C C  C      C C  G  C
Sbjct: 94  CCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGC 126


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRCIICRLWLWGCRCRVGSSC 338
           C  RRC  C  +C C  C      C C  G  C
Sbjct: 94  CCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGC 126


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = -2

Query: 436 CI*RRCGVCRFSCRCIICRLWLWGCRCRVGSSC 338
           C  RRC  C  +C C  C      C C  G  C
Sbjct: 95  CCCRRCCTCCRTCCCTRCCTCCRPCCCGCGCGC 127


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,488,657
Number of Sequences: 27780
Number of extensions: 177569
Number of successful extensions: 564
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)