Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_M02
         (591 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    25   0.73 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    25   0.73 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    25   0.73 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   3.9  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   3.9  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   3.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   9.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.0  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 504 YRTPRAVIFATSSNGFRLRGVTLVH 578
           Y   R  I +T++ GFR+ G+ L H
Sbjct: 399 YMVWRETISSTATLGFRVEGIKLAH 423


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 504 YRTPRAVIFATSSNGFRLRGVTLVH 578
           Y   R  I +T++ GFR+ G+ L H
Sbjct: 314 YMVWRETISSTATLGFRVEGIKLAH 338


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 24.6 bits (51), Expect = 0.73
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 504 YRTPRAVIFATSSNGFRLRGVTLVH 578
           Y   R  I +T++ GFR+ G+ L H
Sbjct: 633 YMVWRETISSTATLGFRVEGIKLAH 657


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 51  CFNKNRTHERHALK 10
           C+N++RT ERH ++
Sbjct: 329 CWNEHRTLERHNIR 342


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 51  CFNKNRTHERHALK 10
           C+N++RT ERH ++
Sbjct: 329 CWNEHRTLERHNIR 342


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 51  CFNKNRTHERHALK 10
           C+N++RT ERH ++
Sbjct: 329 CWNEHRTLERHNIR 342


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 424 HNYTREIVRLMTTLPVPSNRNTLSQ 498
           H+Y+R+  R +TT  V +  + L +
Sbjct: 329 HDYSRQFPRDLTTQTVSTTADVLQE 353


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 378 PQDVSSHSSVEPLF 419
           P DVSS+  V PL+
Sbjct: 265 PLDVSSNDKVHPLY 278


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,338
Number of Sequences: 438
Number of extensions: 2922
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)