Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_L13
         (447 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p pro...   131   5e-31
AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-P...   131   5e-31
AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-P...   131   5e-31
AY071651-1|AAL49273.1|  608|Drosophila melanogaster RE72625p pro...    28   6.6  
AE014296-2796|AAF49415.1|  608|Drosophila melanogaster CG13025-P...    28   6.6  

>AY071683-1|AAL49305.2|  147|Drosophila melanogaster RH08962p
           protein.
          Length = 147

 Score =  131 bits (316), Expect = 5e-31
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
 Frame = +3

Query: 45  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 221
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G  L           
Sbjct: 16  MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 75

Query: 222 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIQYNRRFVNVVQT 401
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+K    TGRAKR IQYNRRFVN VQ 
Sbjct: 76  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 135

Query: 402 FGRRRGPNSNS 434
           FGRRRGPN+NS
Sbjct: 136 FGRRRGPNANS 146


>AE014297-2878|AAN13838.1|  132|Drosophila melanogaster CG15697-PB,
           isoform B protein.
          Length = 132

 Score =  131 bits (316), Expect = 5e-31
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
 Frame = +3

Query: 45  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 221
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G  L           
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 222 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIQYNRRFVNVVQT 401
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+K    TGRAKR IQYNRRFVN VQ 
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120

Query: 402 FGRRRGPNSNS 434
           FGRRRGPN+NS
Sbjct: 121 FGRRRGPNANS 131


>AE014297-2877|AAF55815.1|  132|Drosophila melanogaster CG15697-PA,
           isoform A protein.
          Length = 132

 Score =  131 bits (316), Expect = 5e-31
 Identities = 68/131 (51%), Positives = 82/131 (62%), Gaps = 1/131 (0%)
 Frame = +3

Query: 45  MQLHIRGQST-HVLDVNGQESIGQIKERIRTLAAVGDEDLTLSLCGAPLHXXXXXXXXXX 221
           MQL +RG  T   L+V+   +I  +K ++  +     E+ +L   G  L           
Sbjct: 1   MQLFVRGLETIEALEVSQDATIAGVKNQLAQIHGFNAEEFSLDCEGITLANETPVTALSS 60

Query: 222 XXXXXTVPLLGGKVHGSLARAGKVKGQTPKVEKQQKXXXXTGRAKRTIQYNRRFVNVVQT 401
                 +P+LGGKVHGSLARAGKVKGQTPKVEKQ+K    TGRAKR IQYNRRFVN VQ 
Sbjct: 61  FELDLNIPMLGGKVHGSLARAGKVKGQTPKVEKQEKKKKKTGRAKRRIQYNRRFVNFVQG 120

Query: 402 FGRRRGPNSNS 434
           FGRRRGPN+NS
Sbjct: 121 FGRRRGPNANS 131


>AY071651-1|AAL49273.1|  608|Drosophila melanogaster RE72625p
           protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 5   FFTCQAWLIRFYNYAVAYQRAIDTRPGRQWP 97
           F  CQ   + FY YA A   A+ TR   + P
Sbjct: 445 FLVCQLTALTFYEYAAASDTAVPTRLNVEGP 475


>AE014296-2796|AAF49415.1|  608|Drosophila melanogaster CG13025-PA
           protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 5   FFTCQAWLIRFYNYAVAYQRAIDTRPGRQWP 97
           F  CQ   + FY YA A   A+ TR   + P
Sbjct: 445 FLVCQLTALTFYEYAAASDTAVPTRLNVEGP 475


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,317,067
Number of Sequences: 53049
Number of extensions: 354322
Number of successful extensions: 886
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 886
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1435027293
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)