Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_L04
(583 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC824.06 |tim14||TIM23 translocase complex subunit Tim14|Schiz... 55 9e-09
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 33 0.023
SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces pom... 32 0.070
SPAC14C4.13 |rad17||RFC related checkpoint protein Rad17|Schizos... 32 0.070
SPAC1071.09c |||DNAJ domain protein, DNAJC9 family|Schizosacchar... 31 0.093
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 31 0.16
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 30 0.21
SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1 type|Schizosaccharom... 30 0.21
SPBC11B10.05c |rsp1||random septum position protein Rsp1|Schizos... 29 0.50
SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase |Schizos... 27 2.0
SPAC23E2.03c |ste7||meiotic suppressor protein Ste7|Schizosaccha... 27 2.6
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 27 2.6
SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces pomb... 27 2.6
SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces po... 26 3.5
SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr 2... 26 4.6
SPAC926.05c |||diphthamide biosynthesis protein Dph4 |Schizosacc... 25 6.1
>SPAC824.06 |tim14||TIM23 translocase complex subunit
Tim14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 140
Score = 54.8 bits (126), Expect = 9e-09
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +1
Query: 109 SSIILAGLGMAAVGFAGRYVLKQMPNASMKFAEXVKNLPKFDSETLANSKYYKGGFEPKM 288
SS IL G+G+AA AG+ + +A K+ + F KGGFE KM
Sbjct: 2 SSAILLGVGIAATAAAGKIGV----DAFRKYRNLNGGVKAF----------LKGGFESKM 47
Query: 289 TKREAALILGVSP-TASKAXIRDAHRKIMLLNHPDRG 396
++ EA IL ++ T ++ I++AHR++ML NHPDRG
Sbjct: 48 SRAEAIQILSLNNRTLTRQKIKEAHRRLMLANHPDRG 84
Score = 29.1 bits (62), Expect = 0.50
Identities = 11/20 (55%), Positives = 17/20 (85%)
Frame = +2
Query: 401 SPLIAAKINEAKDLLESGKS 460
SP +A+K+NEAK LL++ +S
Sbjct: 86 SPYVASKVNEAKSLLDADRS 105
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 33.5 bits (73), Expect = 0.023
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 283 KMTKREAALILGVSPTASKAXIRDAHRKIMLLNHPDR 393
K +++ ILGVS A+ I+ A+RK+ L+ HPD+
Sbjct: 344 KSKRKDHYKILGVSKEATDIEIKKAYRKLALVYHPDK 380
>SPBC1734.11 |||DNAJ domain protein Mas5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 407
Score = 31.9 bits (69), Expect = 0.070
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDR 393
+L V TAS+A ++ A+RK+ L HPD+
Sbjct: 10 VLNVDVTASQAELKKAYRKLALKYHPDK 37
>SPAC14C4.13 |rad17||RFC related checkpoint protein
Rad17|Schizosaccharomyces pombe|chr 1|||Manual
Length = 606
Score = 31.9 bits (69), Expect = 0.070
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 190 SMKFAEXVKNLPKFDSETLANSKYYKGGFEPKMTKRE 300
S++ A+ ++ L K DSE A K YK + PK K E
Sbjct: 351 SLEAAQVLERLSKSDSEAYARFKNYKSAYIPKSDKNE 387
>SPAC1071.09c |||DNAJ domain protein, DNAJC9
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 31.5 bits (68), Expect = 0.093
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDR 393
+LGV AS IR A+RK L +HPDR
Sbjct: 35 VLGVEKDASDELIRRAYRKKALQHHPDR 62
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 30.7 bits (66), Expect = 0.16
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +1
Query: 313 LGVSPTASKAXIRDAHRKIMLLNHPDR 393
L V P AS+A ++ A+RK+ L HPD+
Sbjct: 11 LEVRPEASEAELKKAYRKLALKYHPDK 37
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 30.3 bits (65), Expect = 0.21
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDR 393
ILGVS AS++ IR A+R++ HPD+
Sbjct: 11 ILGVSKDASESEIRKAYRQLTKQWHPDK 38
>SPAC4H3.01 |||DNAJ domain protein Caj1/Djp1
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 392
Score = 30.3 bits (65), Expect = 0.21
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDRGWVTPHSSKDQ 426
+LG+S A+ I+ A+RK+ + HPD+ P + ++
Sbjct: 12 LLGISTDATAVDIKKAYRKLAVKYHPDKNPDDPQGASEK 50
>SPBC11B10.05c |rsp1||random septum position protein
Rsp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 494
Score = 29.1 bits (62), Expect = 0.50
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDR 393
ILG T+S IR + K++L HPDR
Sbjct: 16 ILGAESTSSYVEIRQQYLKLVLRYHPDR 43
>SPAC22F8.05 |||alpha,alpha-trehalose-phosphate synthase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 891
Score = 27.1 bits (57), Expect = 2.0
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 44 VHTSDYEFVCYQNHLIRRLLW 106
V+TSD F + NH R++LW
Sbjct: 225 VYTSDSNFEGHYNHYCRKILW 245
>SPAC23E2.03c |ste7||meiotic suppressor protein
Ste7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 569
Score = 26.6 bits (56), Expect = 2.6
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = +1
Query: 184 NASMKFAEXVKNLPKFDSETLANSKYYKGGF--EPKMTKREAALILGVSPTASKAXIRDA 357
N+S + LP+FDS T + S Y + F P +A T+S + +
Sbjct: 160 NSSFGSSAKTFQLPEFDSVTPSASLYKQPSFNSNPAPITTSSATHTSQFSTSSSSSVNSV 219
Query: 358 HRKIMLLN 381
H +M+ N
Sbjct: 220 HTPVMVPN 227
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 26.6 bits (56), Expect = 2.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 313 LGVSPTASKAXIRDAHRKIMLLNHPD 390
LGVS +AS + I+ A+ K+ HPD
Sbjct: 91 LGVSKSASASEIKSAYYKLAKQYHPD 116
>SPBC1734.05c |spf31||DNAJ protein Spf31|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 209
Score = 26.6 bits (56), Expect = 2.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 292 KREAALILGVSPTASKAXIRDAHRKIMLLNHPDRGWVTPHSS 417
K A +L + P S IR+ +RK L+ HPD+ P ++
Sbjct: 29 KLNAYDVLDILPGMSVDDIRNLYRKKSLMIHPDKNRDNPKAA 70
>SPAC3A12.06c |||sodium/calcium exchanger |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 743
Score = 26.2 bits (55), Expect = 3.5
Identities = 11/18 (61%), Positives = 14/18 (77%)
Frame = -2
Query: 459 DFPLSSRSLASLIFAAMR 406
DFPL S SL+SL+F +R
Sbjct: 452 DFPLPSPSLSSLLFPTLR 469
>SPBC405.06 |||DNAJ protein Xdj1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 4.6
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = +1
Query: 310 ILGVSPTASKAXIRDAHRKIMLLNHPDR 393
IL V AS I+ +++++ LL+HPD+
Sbjct: 10 ILEVHFEASAEEIKKSYKRLALLHHPDK 37
>SPAC926.05c |||diphthamide biosynthesis protein Dph4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 139
Score = 25.4 bits (53), Expect = 6.1
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +1
Query: 346 IRDAHRKIMLLNHPDR 393
I++A+RK +LL HPD+
Sbjct: 20 IKEAYRKALLLFHPDK 35
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,155,277
Number of Sequences: 5004
Number of extensions: 39936
Number of successful extensions: 105
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 105
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 250133048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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