Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_L01
         (467 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   0.61 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   1.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   1.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.3  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   4.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   9.9  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    20   9.9  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   9.9  

>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 0.61
 Identities = 11/49 (22%), Positives = 23/49 (46%)
 Frame = -1

Query: 335 ILLISWFLGLSLQLHVQFLPIAHRILLMKNLWFYSRVHR*KVYVCVQVL 189
           +++++W L +   L   FL    ++  M   W   +  + KVY+ +  L
Sbjct: 164 LVMLAWLLSILFSLPTVFLFEEKQVQSMPQCWIDLQTWQWKVYITLVAL 212


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +2

Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKG-FGFITYSQAHMVDEA 379
           TR   +  L+Y+ T ++   +   +          +P  K ++    F+T  Q H +DE 
Sbjct: 357 TRAYQVAVLEYKGTQTNYPSYEPTYDNSRREGKQLNPLNKGTEADSSFVTLPQLHSLDEW 416

Query: 380 QNNRPHKID 406
            +    K D
Sbjct: 417 DDTLKEKAD 425


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = -2

Query: 319 GFWVFHYNYMYN 284
           GFW+FH +++++
Sbjct: 665 GFWLFHCHFLFH 676


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 4/12 (33%), Positives = 11/12 (91%)
 Frame = -2

Query: 319 GFWVFHYNYMYN 284
           G+W+FH +++++
Sbjct: 665 GYWLFHCHFLFH 676


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 19/65 (29%), Positives = 25/65 (38%)
 Frame = -1

Query: 332 LLISWFLGLSLQLHVQFLPIAHRILLMKNLWFYSRVHR*KVYVCVQVLHSHRRFPKASYL 153
           L+   F   S    V F  +A R  L  N W    ++  K Y     LH   R+  A  +
Sbjct: 93  LITPLFFFHSFMTSVLFSQVASRWPLFLNEWTKIEINLLKHYQSTTDLHKKIRY-SAFGM 151

Query: 152 IFTRL 138
           IF  L
Sbjct: 152 IFVAL 156


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +2

Query: 302 MKDPKTKRSKGFGFITYSQA 361
           +  P + +S   GF+TY++A
Sbjct: 72  ISSPSSTKSGSPGFLTYTKA 91


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 372 MKLKIIGLTKLTEELSSQSEQF 437
           +K KI+G + + E+     EQF
Sbjct: 168 LKHKIVGESVIDEKAEEHKEQF 189


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +2

Query: 353 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKRP 460
           S++ +VD   +N P  ++ R + P  +  R  +  P
Sbjct: 4   SRSFLVDSLISNTPKDMNARYLPPSLSDTRPMLPYP 39


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,568
Number of Sequences: 336
Number of extensions: 2300
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10826639
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)