Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_L01
(467 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 122 1e-28
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 122 1e-28
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 122 1e-28
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 108 2e-24
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 108 2e-24
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 108 2e-24
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 93 1e-19
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 93 1e-19
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 92 2e-19
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 92 2e-19
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 65 2e-11
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 50 6e-07
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 50 6e-07
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 49 1e-06
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 48 3e-06
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 48 3e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 48 4e-06
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 47 8e-06
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 46 1e-05
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 46 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 45 2e-05
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 45 2e-05
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 44 4e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 44 5e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 44 5e-05
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 43 1e-04
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 43 1e-04
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 42 2e-04
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 42 3e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 41 4e-04
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 41 4e-04
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 7e-04
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 7e-04
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 40 7e-04
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 7e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 40 7e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 40 7e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 40 7e-04
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 40 9e-04
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 39 0.002
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 39 0.002
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 39 0.002
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 39 0.002
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 38 0.003
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 38 0.004
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 38 0.004
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 38 0.004
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 36 0.011
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 36 0.014
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 36 0.019
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 36 0.019
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 36 0.019
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 35 0.025
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 34 0.058
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 34 0.058
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 34 0.058
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.10
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.10
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.10
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 32 0.18
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 32 0.18
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 32 0.18
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 32 0.18
AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine r... 31 0.41
Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical p... 31 0.54
Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical p... 31 0.54
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 31 0.54
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 30 0.72
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 30 0.72
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 30 0.95
Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical pr... 29 1.3
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 29 1.3
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 29 1.3
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 29 1.3
Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 28 2.9
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 28 2.9
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 2.9
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 2.9
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 3.8
Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical pr... 27 6.7
AF100663-3|AAC68980.1| 529|Caenorhabditis elegans Udp-glucurono... 27 6.7
AF100663-2|AAC68981.2| 532|Caenorhabditis elegans Udp-glucurono... 27 6.7
Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical pr... 27 8.9
U88311-3|AAB42345.1| 526|Caenorhabditis elegans Udp-glucuronosy... 27 8.9
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 27 8.9
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical... 27 8.9
AC006642-7|AAF39828.1| 154|Caenorhabditis elegans Hypothetical ... 27 8.9
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 122 bits (294), Expect = 1e-28
Identities = 54/95 (56%), Positives = 70/95 (73%)
Frame = +2
Query: 173 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI ++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 353 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
S VD A RPH IDG+ V+PKRAVPR++ R
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR 106
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/98 (21%), Positives = 53/98 (54%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 344 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
+T+ VD+ + H ++G + ++ + ++E+ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 197
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 122 bits (294), Expect = 1e-28
Identities = 54/95 (56%), Positives = 70/95 (73%)
Frame = +2
Query: 173 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI ++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 353 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
S VD A RPH IDG+ V+PKRAVPR++ R
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR 106
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/98 (21%), Positives = 53/98 (54%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 344 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
+T+ VD+ + H ++G + ++ + ++E+ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 197
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 122 bits (294), Expect = 1e-28
Identities = 54/95 (56%), Positives = 70/95 (73%)
Frame = +2
Query: 173 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
SGD EPE+ RK+F+GGL TTD ++EFY Q+GEI ++VM+DP TKRS+GFGF+T+
Sbjct: 12 SGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Query: 353 SQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
S VD A RPH IDG+ V+PKRAVPR++ R
Sbjct: 72 SGKTEVDAAMKQRPHIIDGKTVDPKRAVPRDDKNR 106
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/98 (21%), Positives = 53/98 (54%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 100 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 159
Query: 344 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
+T+ VD+ + H ++G + ++ + ++E+ +
Sbjct: 160 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 197
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 108 bits (260), Expect = 2e-24
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 185 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAH 364
++ P RKLFIGGL + TTD L ++ QWG +V +V++DP TK S+GFGF+T++
Sbjct: 42 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 101
Query: 365 MVDEAQNNRPHKIDGRIVEPKRAVPREEI 451
+ A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 102 SAESAMNDRPHKLGGKTVDSKRAIPREQM 130
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 108 bits (260), Expect = 2e-24
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 185 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAH 364
++ P RKLFIGGL + TTD L ++ QWG +V +V++DP TK S+GFGF+T++
Sbjct: 62 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 121
Query: 365 MVDEAQNNRPHKIDGRIVEPKRAVPREEI 451
+ A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 122 SAESAMNDRPHKLGGKTVDSKRAIPREQM 150
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 108 bits (260), Expect = 2e-24
Identities = 42/89 (47%), Positives = 63/89 (70%)
Frame = +2
Query: 185 YEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAH 364
++ P RKLFIGGL + TTD L ++ QWG +V +V++DP TK S+GFGF+T++
Sbjct: 63 HDSPPQLRKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIF 122
Query: 365 MVDEAQNNRPHKIDGRIVEPKRAVPREEI 451
+ A N+RPHK+ G+ V+ KRA+PRE++
Sbjct: 123 SAESAMNDRPHKLGGKTVDSKRAIPREQM 151
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 254 LKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 433
++EFY Q+GEI ++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 434 VPREEIKR 457
VPR++ R
Sbjct: 61 VPRDDKNR 68
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/98 (21%), Positives = 53/98 (54%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 344 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
+T+ VD+ + H ++G + ++ + ++E+ +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 159
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 92.7 bits (220), Expect = 1e-19
Identities = 39/68 (57%), Positives = 52/68 (76%)
Frame = +2
Query: 254 LKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRA 433
++EFY Q+GEI ++VM+DP TKRS+GFGF+T+S VD A RPH IDG+ V+PKRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 434 VPREEIKR 457
VPR++ R
Sbjct: 61 VPRDDKNR 68
Score = 56.0 bits (129), Expect = 1e-08
Identities = 21/98 (21%), Positives = 53/98 (54%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P + + E T++L++ G+ T+ L E++ ++G + ++ D T++ +GFGF
Sbjct: 62 PRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGF 121
Query: 344 ITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREEIKR 457
+T+ VD+ + H ++G + ++ + ++E+ +
Sbjct: 122 VTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDEMSK 159
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 92.3 bits (219), Expect = 2e-19
Identities = 38/92 (41%), Positives = 64/92 (69%)
Frame = +2
Query: 167 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFI 346
++S D + K+FIGGL ++TT +L++++ ++GE+ +VM+DP TKR++GFGFI
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 347 TYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 442
T+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 72.1 bits (169), Expect = 2e-13
Identities = 30/81 (37%), Positives = 54/81 (66%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
T+K+FIGGL +T +K+++E +G++ ++M D T+R +GFGF+T+ + D+
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 383 NNRPHKIDGRIVEPKRAVPRE 445
H+I+G++VE K+A P+E
Sbjct: 193 EIHFHEINGKMVECKKAQPKE 213
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 92.3 bits (219), Expect = 2e-19
Identities = 38/92 (41%), Positives = 64/92 (69%)
Frame = +2
Query: 167 SESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFI 346
++S D + K+FIGGL ++TT +L++++ ++GE+ +VM+DP TKR++GFGFI
Sbjct: 32 ADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFI 91
Query: 347 TYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPR 442
T+ VD+ NNR H++DG+ ++PK A P+
Sbjct: 92 TFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 72.1 bits (169), Expect = 2e-13
Identities = 30/81 (37%), Positives = 54/81 (66%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
T+K+FIGGL +T +K+++E +G++ ++M D T+R +GFGF+T+ + D+
Sbjct: 133 TKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVC 192
Query: 383 NNRPHKIDGRIVEPKRAVPRE 445
H+I+G++VE K+A P+E
Sbjct: 193 EIHFHEINGKMVECKKAQPKE 213
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
K+F+GGL Y T+D +L E++EQ+G+I VV+ D T++S+G+GF+T + A +
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 389 RPHKIDGR 412
IDGR
Sbjct: 96 PNPIIDGR 103
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
+K+F+GG+ + L + Q+GE+ V D RS+GF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 386 NRPHKIDGRIVEPKRAVPREEIK 454
R I G+ VE K A RE K
Sbjct: 89 AREQTIKGKSVEVKPAKSRENKK 111
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
+K+F+GGL ++ L+ +EQ+G++ + D +TK + F FI + + D+A +
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 386 NRPHKIDGRIVEPKRAVPR 442
R + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 50.4 bits (115), Expect = 6e-07
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
+K+F+GG+ + L + Q+GE+ V D RS+GF F+ ++ A
Sbjct: 29 KKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALA 88
Query: 386 NRPHKIDGRIVEPKRAVPREEIK 454
R I G+ VE K A RE K
Sbjct: 89 AREQTIKGKSVEVKPAKSRENKK 111
Score = 49.2 bits (112), Expect = 1e-06
Identities = 22/79 (27%), Positives = 42/79 (53%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
+K+F+GGL ++ L+ +EQ+G++ + D +TK + F FI + + D+A +
Sbjct: 110 KKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKASS 169
Query: 386 NRPHKIDGRIVEPKRAVPR 442
R + K+AVP+
Sbjct: 170 QTKQTFGTRECDVKKAVPQ 188
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.2 bits (112), Expect = 1e-06
Identities = 21/75 (28%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 161 KPSESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKG 334
+P E G++ +PE +R +F+G L + L+E + ++GE+ +++D T + KG
Sbjct: 115 EPREPGENRSKPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKG 174
Query: 335 FGFITYSQAHMVDEA 379
+GF++Y + + A
Sbjct: 175 YGFVSYPRREDAERA 189
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L I L Y+TT + L+ +E++G+I V + +D +++SKGFGF+ + + + A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 392 PHK-IDGR 412
K +DGR
Sbjct: 81 DGKLVDGR 88
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 48.0 bits (109), Expect = 3e-06
Identities = 23/68 (33%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L I L Y+TT + L+ +E++G+I V + +D +++SKGFGF+ + + + A +
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 392 PHK-IDGR 412
K +DGR
Sbjct: 81 DGKLVDGR 88
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 47.6 bits (108), Expect = 4e-06
Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRS 328
I P+E+ E+P T LF+G ++Y T++S L+ +E +G+I + ++ D + +
Sbjct: 87 IATWNPAENPRASEDPYRT--LFVGRINYETSESKLRREFEAYGKIKKLTMVHD-EAGKP 143
Query: 329 KGFGFITYSQAHMVDEAQNNRPH-KIDGRIVEPKRAV 436
+G+ FI YS D+A+ + + K DG V+ KR V
Sbjct: 144 RGYAFIEYS-----DKAEMHTAYKKADGIKVDGKRLV 175
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 46.8 bits (106), Expect = 8e-06
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Frame = +2
Query: 194 PEHT-RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMV 370
P++T + +++ + + T S L+ +++++G I V + DP T +GF IT+
Sbjct: 20 PKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGA 79
Query: 371 DEAQNNRPHKIDGRIVEPKRAVP 439
++A RPH IDG V+ + +P
Sbjct: 80 NKAIEQRPHVIDGDRVDVEPYIP 102
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 46.0 bits (104), Expect = 1e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L + G+D++TTD ++++E G +V + K SKGFGF+ S ++
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEI-KRKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 392 PHKIDGRIVEPKRAVPREEIKRP 460
H IDGR + K R++ RP
Sbjct: 234 QHMIDGRRCDVKVPDGRDKQGRP 256
Score = 31.9 bits (69), Expect = 0.24
Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 155 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKE-FYEQWGEIVHVVVMKDPKT-KRS 328
++K + D P +R +F+G L + + L++ F ++ + V+ D K
Sbjct: 243 DVKVPDGRDKQGRPSISR-IFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPF 301
Query: 329 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKRAVPREE 448
+GF F+T S A + + ++G V A PREE
Sbjct: 302 RGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 46.0 bits (104), Expect = 1e-05
Identities = 18/59 (30%), Positives = 35/59 (59%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++IGGL Y ++ + + Q+GE++++ +++D T +SKGF F+ Y A +N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA-Q 382
R +F+G + Y ++ +++ + + G ++ + ++ D +T + KG+GFI + + A +
Sbjct: 18 RSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIR 77
Query: 383 NNRPHKIDGRIV 418
N +++ GRI+
Sbjct: 78 NLNGYELSGRIL 89
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
E G + + TR +F+G L + L+E ++ +G++ V++D T +SKG+GF
Sbjct: 8 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 67
Query: 344 ITYSQAHMVDEA 379
++Y + + A
Sbjct: 68 VSYPKREEAERA 79
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
E G + + TR +F+G L + L+E ++ +G++ V++D T +SKG+GF
Sbjct: 18 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 77
Query: 344 ITYSQAHMVDEA 379
++Y + + A
Sbjct: 78 VSYPKREEAERA 89
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
E G + + TR +F+G L + L+E ++ +G++ V++D T +SKG+GF
Sbjct: 121 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 180
Query: 344 ITYSQAHMVDEA 379
++Y + + A
Sbjct: 181 VSYPKREEAERA 192
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 45.2 bits (102), Expect = 2e-05
Identities = 20/72 (27%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +2
Query: 170 ESGDDYEEPEHTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
E G + + TR +F+G L + L+E ++ +G++ V++D T +SKG+GF
Sbjct: 89 EPGQQQSKIDTTRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGF 148
Query: 344 ITYSQAHMVDEA 379
++Y + + A
Sbjct: 149 VSYPKREEAERA 160
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 45.2 bits (102), Expect = 2e-05
Identities = 17/58 (29%), Positives = 34/58 (58%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+ +FIG +D+ +T ++E ++ G+IV + KD TK+ K F +I + + ++ A
Sbjct: 55 KSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENA 112
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 44.4 bits (100), Expect = 4e-05
Identities = 17/58 (29%), Positives = 33/58 (56%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+ +FIG +D+ +T ++E ++ G IV + KD TK+ K F +I + + ++ A
Sbjct: 61 KSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENA 118
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++F+GG TT++ L+E +E++ + V ++K +SKG+GFIT+ +E +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKL 125
Query: 389 RPHKIDGR 412
P +++ R
Sbjct: 126 TPKQLEFR 133
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 44.0 bits (99), Expect = 5e-05
Identities = 20/68 (29%), Positives = 40/68 (58%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++F+GG TT++ L+E +E++ + V ++K +SKG+GFIT+ +E +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKMVKS-LDGQSKGYGFITFETEDQAEEIRKL 126
Query: 389 RPHKIDGR 412
P +++ R
Sbjct: 127 TPKQLEFR 134
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 194 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVD 373
P+ ++L + + +R D LK +E++G + V ++ + + SKGFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 374 EA-QNNRPHKIDGRIVEPKRAVPREEIKR 457
A Q I+GR +E A R K+
Sbjct: 207 RARQELHGSMIEGRKIEVNCATARVHSKK 235
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +2
Query: 194 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVD 373
P+ ++L + + +R D LK +E++G + V ++ + + SKGFGF+T + +
Sbjct: 149 PDGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERG--SKGFGFVTMERPQDAE 206
Query: 374 EA-QNNRPHKIDGRIVEPKRAVPREEIKR 457
A Q I+GR +E A R K+
Sbjct: 207 RARQELHGSMIEGRKIEVNCATARVHSKK 235
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 42.3 bits (95), Expect = 2e-04
Identities = 16/56 (28%), Positives = 34/56 (60%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+F+G L ++ LK + ++GE+ V++D +T++SKG+GF+++ + A
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENA 192
Score = 31.1 bits (67), Expect = 0.41
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+++G + +TTD+ L++ + +G+I V + KT+R + F+ Y + +A
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIF---KTQR---YAFVRYEKKECATKA 288
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
KLF+G + + L+ +EQ+G+I ++KD T KG F+TY
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 33.1 bits (72), Expect = 0.10
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHT---RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTK 322
+ +KP+++ P+ +KLFIG L + ++ ++ + +GE+ V V++
Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADG 161
Query: 323 RSKGFGFITYS---QAHMVDEA 379
SKG F+ Y AHM A
Sbjct: 162 ASKGCAFVKYKHGLDAHMAISA 183
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 41.5 bits (93), Expect = 3e-04
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
KLF+G + + L+ +EQ+G+I ++KD T KG F+TY
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 33.1 bits (72), Expect = 0.10
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHT---RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTK 322
+ +KP+++ P+ +KLFIG L + ++ ++ + +GE+ V V++
Sbjct: 103 MQVKPADTDSRPASPKDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVLRG-ADG 161
Query: 323 RSKGFGFITYS---QAHMVDEA 379
SKG F+ Y AHM A
Sbjct: 162 ASKGCAFVKYKHGLDAHMAISA 183
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+++GGLD + ++S L E Q G +V V + KD T +GFGF+ + D A
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 70
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVV-VMKDPKTKRSKGFGFITYSQAHMVDEA 379
+F+G LD + L + + +G I+ V +M+D + SKGF FI ++ D A
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 158
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.1 bits (92), Expect = 4e-04
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+++GGLD + ++S L E Q G +V V + KD T +GFGF+ + D A
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYA 80
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVV-VMKDPKTKRSKGFGFITYSQAHMVDEA 379
+F+G LD + L + + +G I+ V +M+D + SKGF FI ++ D A
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTA 168
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 40.3 bits (90), Expect = 7e-04
Identities = 22/68 (32%), Positives = 40/68 (58%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 GFGFITYS 355
G F+T++
Sbjct: 183 GCAFVTFT 190
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 306
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 303
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 40.3 bits (90), Expect = 7e-04
Identities = 19/49 (38%), Positives = 28/49 (57%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
L++ LD D LK+ +E +G I VM D + RSKGFGF+ + +
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEK 366
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 39.9 bits (89), Expect = 9e-04
Identities = 20/67 (29%), Positives = 34/67 (50%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
L + E E+ T +LF+ L Y T + L+ ++++GE+ V V+ D KT K
Sbjct: 261 LESRDKEEETVREKILETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACK 320
Query: 332 GFGFITY 352
GF + +
Sbjct: 321 GFAIVEF 327
Score = 32.3 bits (70), Expect = 0.18
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Frame = +2
Query: 161 KPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLK-EFYEQWGEIVHVVVMK------DPKT 319
K S +E E LF+ L + TTD SL+ F +++G++V + +P
Sbjct: 626 KKSSKKQSEKEIESGSTLFVKNLAFDTTDGSLEFLFRKRYGDLVKSAQISKKLNPAEPTK 685
Query: 320 KRSKGFGFITYSQAHMVDEA-QNNRPHKIDGRIVEPK 427
S GFGF+ + A A ++ + +DG +E K
Sbjct: 686 PLSMGFGFVQFYTAFDAKTALKDMQGELLDGHSLELK 722
Score = 30.7 bits (66), Expect = 0.54
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
T +L + L T+ L++F+E++G+I +K K + +GF F+ +
Sbjct: 2 TTRLIVKNLPSTCTEQQLRKFFEKYGQISD-ASLKYTKEGKFRGFAFVGF 50
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/49 (30%), Positives = 31/49 (63%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
+++G ++TT+ L F+ G+I +V ++ D +T R +GF FI +++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAE 55
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.1 bits (87), Expect = 0.002
Identities = 13/49 (26%), Positives = 31/49 (63%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
+++G ++TT+ L ++ Q G + +V ++ D +T R +GF F+ +++
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P++ + R+L + + ++ + L +E+ G +V V ++ + + SKGFGF
Sbjct: 86 PNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGF 143
Query: 344 ITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIKR 457
+T D A+ I+GR VE A R K+
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKK 182
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 1/99 (1%)
Frame = +2
Query: 164 PSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGF 343
P++ + R+L + + ++ + L +E+ G +V V ++ + + SKGFGF
Sbjct: 86 PNDRSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERG--SKGFGF 143
Query: 344 ITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPREEIKR 457
+T D A+ I+GR VE A R K+
Sbjct: 144 VTMQNPDDADRARAEFNGTTIEGRRVEVNLATQRVHNKK 182
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++++ + + + L + +G ++ V ++ + + SKGFGF+T ++A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAA 109
Query: 389 -RPHKIDGRIVEPKRAVP--REEIKRP 460
+ GRI+E +RA P R+ I P
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLINNP 136
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 38.7 bits (86), Expect = 0.002
Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
++++ + + + L + +G ++ V ++ + + SKGFGF+T ++A+
Sbjct: 52 RIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRG--SKGFGFVTLDSIESCEKARAA 109
Query: 389 -RPHKIDGRIVEPKRAVP--REEIKRP 460
+ GRI+E +RA P R+ I P
Sbjct: 110 LHESHVQGRIIEVRRATPTRRKLINNP 136
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/58 (31%), Positives = 34/58 (58%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYS 355
D E P+ ++ L + L TT+ L++ + ++GEI ++ D + S+GFGFI ++
Sbjct: 68 DRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFN 125
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKD----------PKTKRSKGFGFITYS 355
RK+ + + + T S L+ F+ Q+G+I ++ ++ PK R+ G IT+
Sbjct: 112 RKIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEKKTSVFGTLPKHSRNCGTATITFK 171
Query: 356 QAHMVDEAQNNRPHKI 403
++ D A+N P ++
Sbjct: 172 KSEHADRAKNANPEEL 187
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 37.9 bits (84), Expect = 0.004
Identities = 15/58 (25%), Positives = 32/58 (55%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 382
K+F+G + + ++ + +E++G + +++D T+ SKG F+T+ EAQ
Sbjct: 56 KMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYHRKDAIEAQ 113
Score = 33.9 bits (74), Expect = 0.058
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +2
Query: 152 LNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSK 331
+ MKP+++ E + RKLFIG L + + +L+E + ++G I V++D K S+
Sbjct: 129 VQMKPADT-----ENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQDGK-SR 182
Query: 332 G 334
G
Sbjct: 183 G 183
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 37.9 bits (84), Expect = 0.004
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 3/89 (3%)
Frame = +2
Query: 200 HTRK--LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVD 373
H RK L++GG T+ L + +G++V + + D ++ + +GFGF+ + A
Sbjct: 7 HNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAA 66
Query: 374 EA-QNNRPHKIDGRIVEPKRAVPREEIKR 457
A N ++ G+ + A P + +R
Sbjct: 67 MAIDNMNESELFGKTIRVNFARPPKATER 95
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 37.5 bits (83), Expect = 0.005
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 194 PEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
P + L+I GL T D L+E ++G I + D T KG+GF+ +
Sbjct: 77 PLSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 129
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 36.7 bits (81), Expect = 0.008
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +2
Query: 173 SGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
+ ++ + L+I GL T D L+E ++G I + D T KG+GF+ +
Sbjct: 96 ASSNFNTTPSSTNLYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDF 155
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 36.3 bits (80), Expect = 0.011
Identities = 22/83 (26%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYS----QAHMVDEA 379
+F+ L Y T + +KE ++G+I ++ K + SKG F+ +S ++ ++
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPIEASNCIEGV 324
Query: 380 QNNRPHKIDGRIVEPKRAVPREE 448
++ ID R+V+ A+PR+E
Sbjct: 325 EDG--VIIDNRLVKANLAIPRKE 345
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 36.3 bits (80), Expect = 0.011
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQ 358
+++G + Y+ T+ + ++ G + +V ++ D +T R +GF F+ +S+
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 36.3 bits (80), Expect = 0.011
Identities = 17/48 (35%), Positives = 31/48 (64%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYS 355
LF+ L T D+ L + + Q+G IV+V +++D T++ KG+ F++ S
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRD-LTQQCKGYAFVSMS 422
Score = 33.5 bits (73), Expect = 0.077
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
L++ G+ T L+ + +G+I+ ++ D T SKG GF+ + + D A
Sbjct: 130 LYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVA 185
Score = 30.7 bits (66), Expect = 0.54
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
E L I L T ++ + GEI +++D T +S G+GF+ Y
Sbjct: 39 ESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNY 90
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 36.3 bits (80), Expect = 0.011
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 5/95 (5%)
Frame = +2
Query: 179 DDYEEPEHTRKLFIGGLDYRTTDSSLKEFYE-QWGEIVHVVVMKDPKTKRSKGFGFITYS 355
+D +H R +FIGG+ T L E +G++ +V + DP+ K KG +T+S
Sbjct: 356 NDNSSVDHRRTVFIGGVPRPTRAQDLARCLEGHYGKVSYVGIDIDPELKYPKGAARVTFS 415
Query: 356 QAHMVDEAQNNR----PHKIDGRIVEPKRAVPREE 448
+ A + R H + + VE K V E+
Sbjct: 416 TSQAFVRAISGRFVQVNHAENNKRVEIKPYVMEEQ 450
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 35.9 bits (79), Expect = 0.014
Identities = 17/77 (22%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Frame = +2
Query: 206 RKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQN 385
+ +++G +DY T +++ + G + V + D + KGF ++ +++ + A
Sbjct: 78 KSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALA 137
Query: 386 NRPHKIDGR--IVEPKR 430
+ GR V+PKR
Sbjct: 138 MTDSLLRGRQIKVDPKR 154
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L++ ++ D L++ + +G I VM D + RSKGFGF+ + + A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 392 PHKIDG 409
K+ G
Sbjct: 404 NSKMIG 409
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+F+ L + ++GEI VVM D + K KGFGF+ ++ +A
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFADQDAAGQA 294
Score = 30.7 bits (66), Expect = 0.54
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
+FI LD + S+ + + +G I+ V D + SKG+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTA---- 201
Query: 392 PHKIDGRIVEPKR 430
K++G ++ K+
Sbjct: 202 IEKVNGMLLSDKK 214
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 35.5 bits (78), Expect = 0.019
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
L++ ++ D L++ + +G I VM D + RSKGFGF+ + + A +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 392 PHKIDG 409
K+ G
Sbjct: 404 NSKMIG 409
Score = 33.1 bits (72), Expect = 0.10
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
+F+ L + ++GEI VVM D + K KGFGF+ ++ +A
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGK-PKGFGFVAFADQDAAGQA 294
Score = 30.7 bits (66), Expect = 0.54
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 212 LFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNNR 391
+FI LD + S+ + + +G I+ V D + SKG+GF+ + H A
Sbjct: 147 IFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGN-SKGYGFVHFETEHSAQTA---- 201
Query: 392 PHKIDGRIVEPKR 430
K++G ++ K+
Sbjct: 202 IEKVNGMLLSDKK 214
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 35.5 bits (78), Expect = 0.019
Identities = 12/33 (36%), Positives = 24/33 (72%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWG 280
DY P +RK+F+GG+ + T+++LK+ + ++G
Sbjct: 287 DYTSPTFSRKIFVGGVPWDITEAALKDSFGEFG 319
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 35.1 bits (77), Expect = 0.025
Identities = 14/55 (25%), Positives = 31/55 (56%)
Frame = +2
Query: 188 EEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
E E+ ++F G L +D L + + ++ V+++ +T +SKG+GF+++
Sbjct: 197 EWDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSF 251
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.058
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +2
Query: 149 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRS 328
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 224 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 281
Query: 329 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 430
+ FI + A ++A K+D +++ +R
Sbjct: 282 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 311
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 33.9 bits (74), Expect = 0.058
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +2
Query: 149 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRS 328
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 224 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 281
Query: 329 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 430
+ FI + A ++A K+D +++ +R
Sbjct: 282 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 311
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 33.9 bits (74), Expect = 0.058
Identities = 24/94 (25%), Positives = 47/94 (50%)
Frame = +2
Query: 149 ILNMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRS 328
IL M D PE+ LF+ L+ TTD L+ + ++G+I + +++D ++ S
Sbjct: 155 ILEMVGDLKDADEVPPENV--LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDS 212
Query: 329 KGFGFITYSQAHMVDEAQNNRPHKIDGRIVEPKR 430
+ FI + A ++A K+D +++ +R
Sbjct: 213 LQYAFIEFDNAKSCEQAF----FKMDNVLIDDRR 242
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 33.9 bits (74), Expect = 0.058
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
++++G + + +L +E+ G+I + +M DP + S+G+ F+TY
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTY 248
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
++++G + + + L+ ++ +G I + + DP T K F F+ Y
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
++++G + + + L+ ++ +G I + + DP T K F F+ Y
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.1 bits (72), Expect = 0.10
Identities = 13/57 (22%), Positives = 31/57 (54%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEA 379
++++ + +++ LK +E +GEIV + + P + +GFG++ ++ EA
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEA 264
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/48 (22%), Positives = 25/48 (52%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
++++G + + + L+ ++ +G I + + DP T K F F+ Y
Sbjct: 103 RIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEY 150
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 346
Query: 377 A 379
A
Sbjct: 347 A 347
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 346
Query: 377 A 379
A
Sbjct: 347 A 347
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 321
Query: 377 A 379
A
Sbjct: 322 A 322
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 32.3 bits (70), Expect = 0.18
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 197 EHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
+ K+FIGGL T+ +KE +G + + D + SKG+ F Y + D+
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQ-GNSKGYAFAEYLDPTLTDQ 324
Query: 377 A 379
A
Sbjct: 325 A 325
>AF078157-14|AAG24081.1| 348|Caenorhabditis elegans Serpentine
receptor, class h protein92 protein.
Length = 348
Score = 31.1 bits (67), Expect = 0.41
Identities = 17/77 (22%), Positives = 34/77 (44%)
Frame = -1
Query: 410 FRQFCEAYYFELHQPYGLENM**IQILLISWFLGLSLQLHVQFLPIAHRILLMKNLWFYS 231
F C YY + Y + L S+F+G++ Q V F+ I +++ + +
Sbjct: 229 FHGCCSLYYLYIEPSYAASTR--TRSLQRSFFIGITAQTCVPFIVIVTTYIIIILTFLFG 286
Query: 230 RVHR*KVYVCVQVLHSH 180
+ + VC+ ++ SH
Sbjct: 287 NLSQGLFNVCISIIGSH 303
>Z72502-15|CAN86590.1| 540|Caenorhabditis elegans Hypothetical
protein C08B6.1b protein.
Length = 540
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 155 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
NM S DY P + +FIGG+ +T + ++W +++++
Sbjct: 254 NMVNSNRYLDYASPTLPKTVFIGGMQVKTKKQGTPKLNKEWDDLLNI 300
>Z72502-14|CAA96584.2| 536|Caenorhabditis elegans Hypothetical
protein C08B6.1a protein.
Length = 536
Score = 30.7 bits (66), Expect = 0.54
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 155 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
NM S DY P + +FIGG+ +T + ++W +++++
Sbjct: 254 NMVNSNRYLDYASPTLPKTVFIGGMQVKTKKQGTPKLNKEWDDLLNI 300
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 30.7 bits (66), Expect = 0.54
Identities = 10/45 (22%), Positives = 23/45 (51%)
Frame = +2
Query: 218 IGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
+ L + L++ + + G ++ + + +D T KGF F+T+
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 30.3 bits (65), Expect = 0.72
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 191 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
E R L I + T L+EF+ G + V ++ D +T RSKG ++ +
Sbjct: 20 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 73
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 30.3 bits (65), Expect = 0.72
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 191 EPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITY 352
E R L I + T L+EF+ G + V ++ D +T RSKG ++ +
Sbjct: 165 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEF 218
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.9 bits (64), Expect = 0.95
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +2
Query: 266 YEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN-RPHKIDGRIVEPKRAVPR 442
+E+ G +V V ++ + + SKGFGF+T D A+ I+GR VE A R
Sbjct: 2 FEKVGPVVDVEIIFNERG--SKGFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLATQR 59
Query: 443 EEIKR 457
K+
Sbjct: 60 VHNKK 64
>Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQA 361
DY P + +F+GG+ T S ++W +++ + KT FG YS +
Sbjct: 260 DYASPTLPKTVFVGGMQVNTKKSGKSTLSKEWNDVLSL-----RKTNVLVSFGSNAYS-S 313
Query: 362 HMVDE 376
M DE
Sbjct: 314 DMPDE 318
>Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQA 361
DY P + +F+GG+ T S ++W +++ + KT FG YS +
Sbjct: 260 DYASPTLPKTVFVGGMQVNTKKSGKSTLSKEWNDVLSL-----RKTNVLVSFGSNAYS-S 313
Query: 362 HMVDE 376
M DE
Sbjct: 314 DMPDE 318
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMV 370
+ K+F+GG+ + + +F+ Q+G + +K R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLV 259
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMV 370
+ K+F+GG+ + + +F+ Q+G + +K R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLV 259
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 29.5 bits (63), Expect = 1.3
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = +2
Query: 203 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMV 370
+ K+F+GG+ + + +F+ Q+G + +K R K +YS +V
Sbjct: 204 SNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSYLFLV 259
>Z75553-5|CAA99950.2| 533|Caenorhabditis elegans Hypothetical
protein ZC443.5 protein.
Length = 533
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 155 NMKPSESGDDYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
N+ S DY P + +F+GG+ T ++ K ++W I+++
Sbjct: 251 NLINSNQYIDYPSPALPKTVFVGGMQVNTNEAKTK-LSDEWNNILNI 296
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+++IG L R ++ ++ F+ +G+I V++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 389 RPHKIDGRIVEPKRAV 436
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+++IG L R ++ ++ F+ +G+I V++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 389 RPHKIDGRIVEPKRAV 436
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 28.3 bits (60), Expect = 2.9
Identities = 16/76 (21%), Positives = 38/76 (50%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+++IG L R ++ ++ F+ +G+I V++ GFGF+ + ++A
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDA--- 52
Query: 389 RPHKIDGRIVEPKRAV 436
H ++G+ + +R +
Sbjct: 53 -VHDLNGKELGGERVI 67
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+LF+G L ++ LKE + G+I + KGF F+ + A+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK-- 167
Query: 389 RPHKIDGRIVEPKR 430
IDGRI+ ++
Sbjct: 168 --EAIDGRIIHGRQ 179
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.3 bits (60), Expect = 2.9
Identities = 19/74 (25%), Positives = 32/74 (43%)
Frame = +2
Query: 209 KLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQAHMVDEAQNN 388
+LF+G L ++ LKE + G+I + KGF F+ + A+
Sbjct: 117 RLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTRAHAESAK-- 167
Query: 389 RPHKIDGRIVEPKR 430
IDGRI+ ++
Sbjct: 168 --EAIDGRIIHGRQ 179
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/32 (34%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +2
Query: 194 PE-HTRKLFIGGLDYRTTDSSLKEFYEQWGEI 286
PE ++RK+F+GGL +S + F+ ++G +
Sbjct: 83 PEVYSRKVFVGGLPSCVKESDILNFFSRYGRL 114
>Z70287-3|CAA94300.1| 1459|Caenorhabditis elegans Hypothetical
protein R09E10.5 protein.
Length = 1459
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 403 NFVRPIILSFINHMGLRICNKSKSF*SLGFWVFHY 299
NF P IL+ N+MG+RI + S LG ++ Y
Sbjct: 514 NFTNPDILTNGNNMGVRISDDSMYGVQLGLYIVGY 548
>Z75529-1|CAA99782.1| 534|Caenorhabditis elegans Hypothetical
protein C44H9.1 protein.
Length = 534
Score = 27.1 bits (57), Expect = 6.7
Identities = 9/38 (23%), Positives = 20/38 (52%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
DY P + +FIGG+ T + ++W +++++
Sbjct: 260 DYPSPTLPKTVFIGGMQVNTNKHGKVKLEKEWDDLLNL 297
>Z71185-2|CAA94904.2| 522|Caenorhabditis elegans Hypothetical
protein C35A5.2 protein.
Length = 522
Score = 27.1 bits (57), Expect = 6.7
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIV 289
DY P T+ + IGG+ T K+ E++ +I+
Sbjct: 252 DYARPILTKTVLIGGISVNVTQLKQKKLNEKYDKII 287
>AF100663-3|AAC68980.1| 529|Caenorhabditis elegans
Udp-glucuronosyltransferase protein20 protein.
Length = 529
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
D+ P + + IGGL +T SLK E+W +I+ +
Sbjct: 255 DFPAPTFDKIIPIGGLSVKTDKKSLK-LEEKWSKILDI 291
>AF100663-2|AAC68981.2| 532|Caenorhabditis elegans
Udp-glucuronosyltransferase protein19 protein.
Length = 532
Score = 27.1 bits (57), Expect = 6.7
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHV 295
D+ P + + IGGL +T SLK E+W +I+ +
Sbjct: 258 DFPAPTFDKIIPIGGLSVKTDKKSLK-LEEKWSKILDI 294
>Z82269-3|CAB05207.2| 1319|Caenorhabditis elegans Hypothetical protein
F52G2.2a protein.
Length = 1319
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 413 FFRQFCEAYYFELHQPYGLEN 351
F QF AYYFELH+ N
Sbjct: 1088 FSDQFVSAYYFELHEILATSN 1108
>Z82269-2|CAJ76945.1| 1129|Caenorhabditis elegans Hypothetical
protein F52G2.2b protein.
Length = 1129
Score = 26.6 bits (56), Expect = 8.9
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = -1
Query: 413 FFRQFCEAYYFELHQPYGLEN 351
F QF AYYFELH+ N
Sbjct: 898 FSDQFVSAYYFELHEILATSN 918
>Z75530-3|CAA99793.1| 702|Caenorhabditis elegans Hypothetical
protein C47E8.5 protein.
Length = 702
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +2
Query: 251 SLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYS 355
+ K+FYEQ+G+ + + + +D T R K F+ YS
Sbjct: 404 NFKKFYEQFGKNLKLGIHED-STNRKKLSDFLRYS 437
>U88311-3|AAB42345.1| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein27 protein.
Length = 526
Score = 26.6 bits (56), Expect = 8.9
Identities = 18/69 (26%), Positives = 35/69 (50%)
Frame = +2
Query: 182 DYEEPEHTRKLFIGGLDYRTTDSSLKEFYEQWGEIVHVVVMKDPKTKRSKGFGFITYSQA 361
D+ P + + IGG+ T +E ++W H++ ++ S FG + +S +
Sbjct: 259 DFPRPILQKTVSIGGISVDTKKIKSQELDKEWN---HILNKRNLNMLIS--FGSMIHS-S 312
Query: 362 HMVDEAQNN 388
HM+D+A+ N
Sbjct: 313 HMLDDAKKN 321
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 26.6 bits (56), Expect = 8.9
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +2
Query: 167 SESGDDYEEPEHTRKLFIGGLDYRTTDSS 253
SE D+YEE KL G +DYR S+
Sbjct: 115 SEGSDEYEEYAPPCKLTKGDIDYRVDTST 143
>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
protein Y39B6A.18 protein.
Length = 1352
Score = 26.6 bits (56), Expect = 8.9
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 321 RDQKDLDLLHILKPIWLMKLKIIGLTKLTEELSSQSEQFQGKRLKDXK 464
R Q +++++ I+K I + I LTK+ E + QF+ RL K
Sbjct: 432 RTQSEMEVIEIVKNI---RSNNISLTKIQESVKGIENQFKAVRLDSLK 476
>AC006642-7|AAF39828.1| 154|Caenorhabditis elegans Hypothetical
protein F49H12.2 protein.
Length = 154
Score = 26.6 bits (56), Expect = 8.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 287 VHVVVMKDPKTKRSKGFGFITYSQAHMVDE 376
VH V K+P K+S I+ S H +DE
Sbjct: 98 VHKVEKKEPPPKKSSNITPISISDTHFMDE 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,334,548
Number of Sequences: 27780
Number of extensions: 207598
Number of successful extensions: 688
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 684
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 839684522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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