Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K17
         (635 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical pr...   144   4e-35
AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical ...    27   8.5  

>Z80216-6|CAB02285.2|  313|Caenorhabditis elegans Hypothetical
           protein F10G8.6 protein.
          Length = 313

 Score =  144 bits (350), Expect = 4e-35
 Identities = 67/137 (48%), Positives = 99/137 (72%), Gaps = 1/137 (0%)
 Frame = +3

Query: 228 KVGLLXIXLCGPSVPYILNLEGHDVHXSAEGWVPVYMDSEQRLGVLSIGFLLTSRNDSVV 407
           +V +L + +CGPS P ++ +E  +VH SA+GW PV +  +  L ++SI FLL  +ND+V+
Sbjct: 90  QVAILDVDICGPSQPRMMGVEDEEVHNSADGWTPVGI--QPNLTLMSIAFLLGDKNDAVI 147

Query: 408 LRGPKKTSIIKQFLQXVYWQELXFLVIDTPPGTSDEHITVMXNLRQV-PQCSAILVTTPQ 584
            RG +K  +IKQFL+ V W E+ +L+IDTPPGTSDEHI+++  L Q  P   A++V+TPQ
Sbjct: 148 WRGARKNGMIKQFLKDVDWGEVDYLLIDTPPGTSDEHISLVQFLLQAGPLDGALIVSTPQ 207

Query: 585 EVAIXXVRKEITFCTKT 635
           EV++  VRKE++FC KT
Sbjct: 208 EVSLLDVRKEVSFCVKT 224


>AF077533-1|AAZ91357.1| 1126|Caenorhabditis elegans Hypothetical
            protein F54G2.1a protein.
          Length = 1126

 Score = 27.5 bits (58), Expect = 8.5
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 423  KTSIIKQFLQXVYWQELXFLVIDTPPGTSDEHITVM 530
            KT ++ + L  ++ +   F +   PP T+  H TVM
Sbjct: 1018 KTKVVSKSLNPIFDETFEFHIPPNPPSTAMLHFTVM 1053


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,066,397
Number of Sequences: 27780
Number of extensions: 255106
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 427
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)