Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP04_F_K14
         (570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-li...   167   2e-41
BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse) pr...   130   4e-30
AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens ...   130   4e-30
BC020192-1|AAH20192.1|  258|Homo sapiens FRAS1 protein protein.        31   2.9  
U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog pro...    30   6.6  
AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking r...    30   6.6  
AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking r...    30   6.6  

>BC035727-1|AAH35727.1|  337|Homo sapiens Lix1 homolog (mouse)-like
           protein.
          Length = 337

 Score =  167 bits (407), Expect = 2e-41
 Identities = 81/127 (63%), Positives = 90/127 (70%)
 Frame = +3

Query: 165 VNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQNCPTK 344
           VNVVEALQEFWQ+K           LV+YE VP+  PPYVCYVTLPGG+CFGSFQ CPTK
Sbjct: 98  VNVVEALQEFWQMKQSRGADLKNGALVVYEMVPSNSPPYVCYVTLPGGSCFGSFQFCPTK 157

Query: 345 AEARRSAAKIALMNSVFNEHESRRISDHFIEXXXXXXXXXXXGDTSNPHQDPSAGIAAFR 524
           AEARRSAAKIALMNSVFNEH SRRI+D FIE           G+      +P+ GI AFR
Sbjct: 158 AEARRSAAKIALMNSVFNEHPSRRITDEFIEKSVSEALASFNGNREEA-DNPNTGIGAFR 216

Query: 525 FMLESEQ 545
           FMLES +
Sbjct: 217 FMLESNK 223


>BC036467-1|AAH36467.1|  282|Homo sapiens Lix1 homolog (mouse)
           protein.
          Length = 282

 Score =  130 bits (313), Expect = 4e-30
 Identities = 63/129 (48%), Positives = 81/129 (62%)
 Frame = +3

Query: 153 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 332
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 333 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEXXXXXXXXXXXGDTSNPHQDPSAGI 512
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI            G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 513 AAFRFMLES 539
            A+ +MLES
Sbjct: 143 GAYHYMLES 151


>AK098400-1|BAC05298.1|  282|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25534 fis, clone CBR08513. ).
          Length = 282

 Score =  130 bits (313), Expect = 4e-30
 Identities = 63/129 (48%), Positives = 81/129 (62%)
 Frame = +3

Query: 153 VLSTVNVVEALQEFWQVKXXXXXXXXXXXLVIYESVPAAHPPYVCYVTLPGGACFGSFQN 332
           V   +NVV  LQEFW+ K           +V+YES+PA  PP+V YVTLPGG+CFG+FQ 
Sbjct: 24  VFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLPAPGPPFVSYVTLPGGSCFGNFQC 83

Query: 333 CPTKAEARRSAAKIALMNSVFNEHESRRISDHFIEXXXXXXXXXXXGDTSNPHQDPSAGI 512
           C ++AEARR AAK+AL+NS+FNE  SRRI+  FI            G T +   DPS  +
Sbjct: 84  CLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTSG-TLDDADDPSTSV 142

Query: 513 AAFRFMLES 539
            A+ +MLES
Sbjct: 143 GAYHYMLES 151


>BC020192-1|AAH20192.1|  258|Homo sapiens FRAS1 protein protein.
          Length = 258

 Score = 31.1 bits (67), Expect = 2.9
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = -3

Query: 568 GIPASSDLCSLSSMNLNAAIPALGSWCGLLVSPAKXARASATAFSMKW 425
           G   +  LC +S ++L A +  +  W G+L+ PA  A A+    +  W
Sbjct: 197 GFYQAGSLCLVSGVSLPAPVLHVYQWAGVLILPASPADAARAVCAYLW 244


>U67615-1|AAB41309.1| 3801|Homo sapiens beige protein homolog protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 249  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 347
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL390765-1|CAI14952.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 249  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 347
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


>AL121997-1|CAI18987.1| 3801|Homo sapiens lysosomal trafficking
            regulator protein.
          Length = 3801

 Score = 29.9 bits (64), Expect = 6.6
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +3

Query: 249  YESVPAAHPPYVCYVTLPGGACFGSFQNCPTKA 347
            Y   P+A  P VC+ + P G  FGS Q  PT+A
Sbjct: 3472 YVGSPSAPVPVVCF-SQPHGERFGSLQALPTRA 3503


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,293,458
Number of Sequences: 237096
Number of extensions: 1131929
Number of successful extensions: 3013
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2896
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3010
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)