Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP04_F_K08
(652 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription ... 164 8e-41
AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p pro... 164 8e-41
AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-P... 164 8e-41
AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-P... 164 8e-41
AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-P... 164 8e-41
U06450-1|AAC46479.1| 160|Drosophila melanogaster TFIID 22 kDa s... 164 1e-40
AY752880-1|AAV33345.1| 138|Drosophila melanogaster TAF-like pro... 42 0.001
AE014134-766|AAF50987.1| 138|Drosophila melanogaster CG15632-PA... 41 0.001
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro... 32 0.59
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P... 32 0.59
DQ138728-1|ABA86334.1| 169|Drosophila melanogaster CG4185 protein. 29 4.1
AF302257-1|AAG15388.1| 183|Drosophila melanogaster NC2beta prot... 29 4.1
AE014134-2547|AAF53428.1| 183|Drosophila melanogaster CG4185-PA... 29 4.1
AY118668-1|AAM50528.1| 601|Drosophila melanogaster AT01616p pro... 29 7.2
AE014296-3258|AAF49085.2| 601|Drosophila melanogaster CG17736-P... 29 7.2
>U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription
initiation factorTFIID 28 kDa subunit protein.
Length = 196
Score = 164 bits (399), Expect = 8e-41
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 120 SNNSLAQAANM---PTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAK 290
++NS + A+ + P + + Q + NN S Q + G + P+ S+ +
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 291 VGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAK 470
AG +++ +L++PRL ELVREVD T QLDE+V E+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 471 HRHAPNVXLXDVQLHLXRQWNMWIPGFGNDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
HR + + + DVQLH R++NMWIPGFG DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p
protein.
Length = 196
Score = 164 bits (399), Expect = 8e-41
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 120 SNNSLAQAANM---PTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAK 290
++NS + A+ + P + + Q + NN S Q + G + P+ S+ +
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 291 VGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAK 470
AG +++ +L++PRL ELVREVD T QLDE+V E+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 471 HRHAPNVXLXDVQLHLXRQWNMWIPGFGNDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
HR + + + DVQLH R++NMWIPGFG DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-PC,
isoform C protein.
Length = 196
Score = 164 bits (399), Expect = 8e-41
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 120 SNNSLAQAANM---PTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAK 290
++NS + A+ + P + + Q + NN S Q + G + P+ S+ +
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 291 VGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAK 470
AG +++ +L++PRL ELVREVD T QLDE+V E+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 471 HRHAPNVXLXDVQLHLXRQWNMWIPGFGNDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
HR + + + DVQLH R++NMWIPGFG DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-PB,
isoform B protein.
Length = 196
Score = 164 bits (399), Expect = 8e-41
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 120 SNNSLAQAANM---PTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAK 290
++NS + A+ + P + + Q + NN S Q + G + P+ S+ +
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 291 VGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAK 470
AG +++ +L++PRL ELVREVD T QLDE+V E+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 471 HRHAPNVXLXDVQLHLXRQWNMWIPGFGNDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
HR + + + DVQLH R++NMWIPGFG DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-PA,
isoform A protein.
Length = 196
Score = 164 bits (399), Expect = 8e-41
Identities = 84/178 (47%), Positives = 117/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 120 SNNSLAQAANM---PTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAK 290
++NS + A+ + P + + Q + NN S Q + G + P+ S+ +
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 291 VGQGGAGDQSSQLLSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAK 470
AG +++ +L++PRL ELVREVD T QLDE+V E+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 471 HRHAPNVXLXDVQLHLXRQWNMWIPGFGNDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
HR + + + DVQLH R++NMWIPGFG DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIKKY 196
>U06450-1|AAC46479.1| 160|Drosophila melanogaster TFIID 22 kDa
subunit protein.
Length = 160
Score = 164 bits (398), Expect = 1e-40
Identities = 79/150 (52%), Positives = 104/150 (69%)
Frame = +3
Query: 195 NNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDP 374
NN S Q + G + P+ S+ + AG +++ +L++PRL ELVREVD
Sbjct: 12 NNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTELVREVDT 70
Query: 375 TVQLDEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQLHLXRQWNMWIPGFG 554
T QLDE+V E+LLQ+ DF++ T+ S A AKHR + + + DVQLH R++NMWIPGFG
Sbjct: 71 TTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERKYNMWIPGFG 130
Query: 555 NDELRPYKRAAVTEAHRQRMALIRKSIKKY 644
DELRPYKRAAVTEAH+QR+ALIRK+IKKY
Sbjct: 131 TDELRPYKRAAVTEAHKQRLALIRKTIKKY 160
>AY752880-1|AAV33345.1| 138|Drosophila melanogaster TAF-like
protein protein.
Length = 138
Score = 41.5 bits (93), Expect = 0.001
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +3
Query: 210 SPQLQNTSIQGSPSQHSPMGT-QSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDPTVQL 386
S + +TSI S + P +SQ GG+ D ++S+ + + V+++D L
Sbjct: 32 SSRSSDTSIDTSSVEKEPASVIESQSVP---GGSYD----IISKTNMLQFVQKIDANSSL 84
Query: 387 DEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQLHLXRQWNMWIP 545
D++ +M+ ++A F++ LAK+R + +V + D++ L R++NM P
Sbjct: 85 DDQGCDMMARIADAFVNDVSMRMVKLAKYRKS-DVSVLDLKFILKREFNMEFP 136
>AE014134-766|AAF50987.1| 138|Drosophila melanogaster CG15632-PA
protein.
Length = 138
Score = 41.1 bits (92), Expect = 0.001
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 1/113 (0%)
Frame = +3
Query: 210 SPQLQNTSIQGSPSQHSPMGT-QSQVAKVGQGGAGDQSSQLLSRPRLQELVREVDPTVQL 386
S + +TSI S + P +SQ GG+ D ++S+ + + V+++D L
Sbjct: 32 SSRSSDTSIDTSSVEKEPASVIESQSVP---GGSYD----IISKTNMLQFVQKIDANSSL 84
Query: 387 DEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQLHLXRQWNMWIP 545
D++ +M+ ++A F++ LAK+R + +V + D++ L R++NM P
Sbjct: 85 DDQGCDMMARIADAFVNDISMRIVKLAKYRKS-DVSVLDLKFILKREFNMEFP 136
>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p
protein.
Length = 1051
Score = 32.3 bits (70), Expect = 0.59
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +3
Query: 141 AANMPTIGTVGQGAIQYVNNL--MQSPQLQNTSIQG--SPS----QHSPMGTQSQVAKVG 296
A P +G G G + L + +PQ N + G SPS SP+G+
Sbjct: 385 ATQSPGVGGSGGGVGGGLATLASLYAPQFTNLLLGGGGSPSASTQSSSPLGSLLGAFAGA 444
Query: 297 QGGAGDQSSQL-LSRPRLQELVREVDPTVQLDE 392
QGGAG QS L SRP +L+R ++ + D+
Sbjct: 445 QGGAGQQSGGLGGSRPPNTQLIRALENIARNDD 477
>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
protein.
Length = 1051
Score = 32.3 bits (70), Expect = 0.59
Identities = 30/93 (32%), Positives = 43/93 (46%), Gaps = 9/93 (9%)
Frame = +3
Query: 141 AANMPTIGTVGQGAIQYVNNL--MQSPQLQNTSIQG--SPS----QHSPMGTQSQVAKVG 296
A P +G G G + L + +PQ N + G SPS SP+G+
Sbjct: 385 ATQSPGVGGSGGGVGGGLATLASLYAPQFTNLLLGGGGSPSASTQSSSPLGSLLGAFAGA 444
Query: 297 QGGAGDQSSQL-LSRPRLQELVREVDPTVQLDE 392
QGGAG QS L SRP +L+R ++ + D+
Sbjct: 445 QGGAGQQSGGLGGSRPPNTQLIRALENIARNDD 477
>DQ138728-1|ABA86334.1| 169|Drosophila melanogaster CG4185 protein.
Length = 169
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 330 LSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQ 509
L R + ++++E+ PTV++ E E++L +FI + A + R+ + V
Sbjct: 12 LPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVL 71
Query: 510 LHLXR 524
L R
Sbjct: 72 EALER 76
>AF302257-1|AAG15388.1| 183|Drosophila melanogaster NC2beta
protein.
Length = 183
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 330 LSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQ 509
L R + ++++E+ PTV++ E E++L +FI + A + R+ + V
Sbjct: 20 LPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVL 79
Query: 510 LHLXR 524
L R
Sbjct: 80 EALER 84
>AE014134-2547|AAF53428.1| 183|Drosophila melanogaster CG4185-PA
protein.
Length = 183
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/65 (24%), Positives = 31/65 (47%)
Frame = +3
Query: 330 LSRPRLQELVREVDPTVQLDEEVXEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVQ 509
L R + ++++E+ PTV++ E E++L +FI + A + R+ + V
Sbjct: 20 LPRASINKIIKELVPTVRVANESRELILNCCSEFIHLISSEANEVCNMRNKKTINAEHVL 79
Query: 510 LHLXR 524
L R
Sbjct: 80 EALER 84
>AY118668-1|AAM50528.1| 601|Drosophila melanogaster AT01616p
protein.
Length = 601
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 120 SNNSLAQAANMPTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQ 299
++ ++A+ M T+GT G I +N ++PQ SP + T+ + V +
Sbjct: 17 NDETVAKCCFMITVGTDGLIEISSLNQECKNPQ-SGADSSNSPLTNGTKETKKECIAVLK 75
Query: 300 GGAG---DQSSQLLSRPRLQELVREVDPTVQL 386
G + D S++ L + + + + E+ T L
Sbjct: 76 GNSNDIDDDSTEKLEKSKNDKSIEEIKKTETL 107
>AE014296-3258|AAF49085.2| 601|Drosophila melanogaster CG17736-PA
protein.
Length = 601
Score = 28.7 bits (61), Expect = 7.2
Identities = 21/92 (22%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 120 SNNSLAQAANMPTIGTVGQGAIQYVNNLMQSPQLQNTSIQGSPSQHSPMGTQSQVAKVGQ 299
++ ++A+ M T+GT G I +N ++PQ SP + T+ + V +
Sbjct: 17 NDETVAKCCFMITVGTDGLIEISSLNQECKNPQ-SGADSSNSPLTNGTKETKKECIAVLK 75
Query: 300 GGAG---DQSSQLLSRPRLQELVREVDPTVQL 386
G + D S++ L + + + + E+ T L
Sbjct: 76 GNSNDIDDDSTEKLEKSKNDKSIEEIKKTETL 107
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,577,229
Number of Sequences: 53049
Number of extensions: 443904
Number of successful extensions: 1556
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1551
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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